MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 44779 bp
Accession: NZ_CP032994 Location: 1..44779 Organism: Escherichia coli strain W5-6 Replicon: plasmid p2_W5-6
Accession: NZ_CP032994 Location: 1..44779 Organism: Escherichia coli strain W5-6 Replicon: plasmid p2_W5-6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9V54_RS24155 () | 2504..2800 | - | 297 | WP_000916182.1 | TrbC/VirB2 family protein | - |
| D9V54_RS24160 () | 2778..3051 | - | 274 | Protein_2 | hypothetical protein | VF |
| D9V54_RS24165 () | 3141..3428 | - | 288 | WP_121640953.1 | hypothetical protein | VF |
| D9V54_RS24170 () | 3602..4121 | - | 520 | Protein_4 | transcription termination factor NusG | - |
| D9V54_RS24175 () | 4467..5635 | - | 1169 | Protein_5 | hypothetical protein | Relaxase |
| D9V54_RS24180 () | 5638..6183 | - | 546 | WP_015060502.1 | hypothetical protein | - |
| D9V54_RS25290 () | 6178..6252 | - | 75 | Protein_7 | DNA distortion polypeptide 3 | - |
| D9V54_RS24190 () | 6510..6782 | - | 273 | WP_000160399.1 | hypothetical protein | - |
| D9V54_RS24195 () | 6795..6944 | - | 150 | WP_000003880.1 | hypothetical protein | - |
| D9V54_RS24200 () | 7014..7193 | - | 180 | WP_000439078.1 | hypothetical protein | - |
| D9V54_RS24205 () | 7236..7565 | - | 330 | WP_000866648.1 | hypothetical protein | - |
| D9V54_RS24210 () | 7658..7873 | - | 216 | WP_001180116.1 | hypothetical protein | - |
| D9V54_RS24215 () | 7863..8108 | - | 246 | WP_106493875.1 | hypothetical protein | - |
| D9V54_RS24220 () | 8153..8476 | - | 324 | WP_001181903.1 | hypothetical protein | - |
| D9V54_RS24225 () | 8622..8903 | - | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D9V54_RS24230 () | 8893..9144 | - | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| D9V54_RS24245 () | 10378..11214 | + | 837 | WP_001050931.1 | replication initiation protein | - |
| D9V54_RS24250 () | 11254..11700 | + | 447 | WP_001074386.1 | hypothetical protein | - |
| D9V54_RS24255 () | 11768..12190 | + | 423 | WP_031942371.1 | DNA distortion polypeptide 3 | - |
| D9V54_RS24260 () | 12250..13218 | - | 969 | WP_031942372.1 | IS5 family transposase IS903B | Transposase |
| D9V54_RS24265 () | 13220..13513 | - | 294 | WP_015060510.1 | hypothetical protein | - |
| D9V54_RS24270 () | 13529..13759 | - | 231 | WP_000051064.1 | partitioning protein | - |
| D9V54_RS24275 () | 13811..14431 | - | 621 | WP_000864791.1 | ParA family protein | - |
| D9V54_RS24280 () | 14717..15361 | + | 645 | WP_024127744.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| D9V54_RS24285 () | 15558..16349 | + | 792 | WP_052921319.1 | hypothetical protein | - |
| D9V54_RS24290 () | 16438..17412 | - | 975 | WP_068863057.1 | Abi family protein | - |
| D9V54_RS24295 () | 17791..18129 | - | 339 | WP_052921317.1 | hypothetical protein | - |
| D9V54_RS24300 () | 18281..19141 | - | 861 | WP_000027057.1 | hypothetical protein | ARG |
| D9V54_RS24305 () | 19324..19686 | - | 363 | Protein_29 | Tn3 family transposase TnpR_Tn3 | Transposase |
| D9V54_RS24310 () | 19739..20443 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| D9V54_RS24315 () | 20511..21809 | + | 1299 | Protein_31 | Tn3 family transposase TnpA_Tn3 | Transposase |
| D9V54_RS24320 () | 21843..22133 | + | 291 | Protein_32 | recombinase family protein | - |
| D9V54_RS24325 () | 22249..22428 | - | 180 | WP_012291479.1 | hypothetical protein | - |
| D9V54_RS24330 () | 23726..24422 | - | 697 | Protein_34 | IS1 family transposase | - |
| D9V54_RS24335 () | 24503..25138 | - | 636 | WP_000677445.1 | hypothetical protein | VF |
| D9V54_RS24340 () | 25152..26147 | - | 996 | WP_031942364.1 | Fimbria adhesin protein | VF |
| D9V54_RS24345 () | 26138..28624 | - | 2487 | WP_000813718.1 | Outer membrane usher protein HtrE | VF |
| D9V54_RS24350 () | 28636..29337 | - | 702 | WP_000820818.1 | putative fimbrial chaperone YadV | VF |
| D9V54_RS24355 () | 29433..30041 | - | 609 | WP_002916128.1 | hypothetical protein | VF |
| D9V54_RS24360 () | 30323..31020 | + | 698 | Protein_40 | IS1 family transposase | - |
| D9V54_RS24365 () | 31017..31457 | + | 441 | WP_071997311.1 | EAL domain-containing protein | - |
| D9V54_RS24370 () | 31726..32160 | - | 435 | WP_001293129.1 | H-NS histone family protein | - |
| D9V54_RS24375 () | 32176..32382 | - | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| D9V54_RS24380 () | 32379..34532 | - | 2154 | WP_121640956.1 | type IA DNA topoisomerase | - |
| D9V54_RS24385 () | 34668..35591 | + | 924 | WP_031942377.1 | SMEK domain-containing protein | - |
| D9V54_RS24390 () | 35706..36008 | - | 303 | WP_000717624.1 | IncN plasmid KikA protein | - |
| D9V54_RS24395 () | 36005..36418 | - | 414 | WP_031942378.1 | conjugal transfer protein VirB | - |
| D9V54_RS24400 () | 36415..38250 | - | 1836 | WP_031942379.1 | type IV secretory system conjugative DNA transfer family protein | - |
| D9V54_RS24405 () | 38253..39284 | - | 1032 | WP_121640958.1 | Type IV secretion system protein VirB11 | VF |
| D9V54_RS24410 () | 39286..40491 | - | 1206 | WP_000139139.1 | Type IV secretion system protein virB10 | VF |
| D9V54_RS24415 () | 40488..41417 | - | 930 | WP_000783379.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| D9V54_RS24420 () | 41422..42135 | - | 714 | WP_000394613.1 | type IV secretion system protein | - |
| D9V54_RS24425 () | 42380..43441 | - | 1062 | WP_088183765.1 | hypothetical protein | VF |
| D9V54_RS24430 () | 43453..43737 | - | 285 | WP_000748128.1 | EexN family lipoprotein | - |
| D9V54_RS24435 () | 43752..44501 | - | 750 | WP_000744202.1 | pilus assembly protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|