MGE detailed information
MGE type: Prophage MGE length: 75952 bp
Accession: NZ_CP032992 Location: 3913363..3989314 Organism: Escherichia coli strain W5-6 Replicon: chromosome
Accession: NZ_CP032992 Location: 3913363..3989314 Organism: Escherichia coli strain W5-6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9V54_RS19270 () | 3910961..3911686 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| D9V54_RS19275 () | 3911723..3912262 | - | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| D9V54_RS19280 () | 3912327..3912881 | - | 555 | WP_000695588.1 | type 1 fimbrial major subunit FimA | - |
| D9V54_RS19290 () | 3913363..3913959 | - | 597 | WP_000044711.1 | hypothetical protein | VF |
| D9V54_RS19295 () | 3914436..3915038 | - | 603 | WP_000790583.1 | hypothetical protein | VF |
| D9V54_RS19310 () | 3916494..3917210 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| D9V54_RS19315 () | 3917230..3918336 | + | 1107 | WP_001300022.1 | N-acetylneuraminate epimerase | - |
| D9V54_RS19320 () | 3918400..3919380 | + | 981 | WP_000991442.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| D9V54_RS19325 () | 3919388..3919510 | - | 123 | WP_001300013.1 | hypothetical protein | - |
| D9V54_RS19330 () | 3919592..3920464 | + | 873 | WP_000168555.1 | HNH endonuclease | - |
| D9V54_RS19335 () | 3920527..3921837 | - | 1311 | WP_000842794.1 | McrC family protein | - |
| D9V54_RS19340 () | 3921834..3923888 | - | 2055 | WP_000249525.1 | McrB family protein | - |
| D9V54_RS19345 () | 3924246..3924344 | - | 99 | Protein_3709 | DUF4942 domain-containing protein | - |
| D9V54_RS19350 () | 3924544..3924879 | + | 336 | Protein_3710 | transposase | - |
| D9V54_RS19355 () | 3924876..3925223 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| D9V54_RS19360 () | 3925273..3926657 | + | 1385 | Protein_3712 | IS66 family transposase ISEc8 | Transposase |
| D9V54_RS19365 () | 3926896..3928254 | - | 1359 | WP_000823243.1 | esterase-like activity of phytase family protein | - |
| D9V54_RS19370 () | 3928536..3928667 | + | 132 | Protein_3714 | IS3 family transposase | - |
| D9V54_RS19380 () | 3928987..3929244 | - | 258 | WP_000555341.1 | hypothetical protein | - |
| D9V54_RS19385 () | 3929584..3929682 | - | 99 | Protein_3716 | integrase core domain-containing protein | - |
| D9V54_RS19390 () | 3929946..3930430 | - | 485 | Protein_3717 | IS1 family transposase IS1F | Transposase |
| D9V54_RS25410 () | 3930517..3930585 | - | 69 | WP_211180522.1 | protein YkiE | - |
| D9V54_RS19395 () | 3930722..3931243 | + | 522 | WP_001283626.1 | hypothetical protein | VF |
| D9V54_RS19400 () | 3931240..3932193 | + | 954 | WP_001068910.1 | fec operon regulator FecR | - |
| D9V54_RS19405 () | 3932280..3934604 | + | 2325 | WP_000188281.1 | Fe(3+) dicitrate transport protein FecA | - |
| D9V54_RS19410 () | 3934649..3935551 | + | 903 | WP_000879152.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| D9V54_RS19415 () | 3935548..3936546 | + | 999 | WP_000125187.1 | hypothetical protein | VF |
| D9V54_RS19420 () | 3936543..3937499 | + | 957 | WP_000684856.1 | hypothetical protein | VF |
| D9V54_RS19425 () | 3937500..3938267 | + | 768 | WP_000175457.1 | hypothetical protein | VF |
| D9V54_RS25095 () | 3938824..3939081 | - | 258 | WP_000177057.1 | hypothetical protein | - |
| D9V54_RS19435 () | 3939164..3940068 | - | 905 | Protein_3727 | IS3 family transposase | - |
| D9V54_RS19445 () | 3940133..3941284 | + | 1152 | WP_001254928.1 | IS30 family transposase IS30D | Transposase |
| D9V54_RS19450 () | 3941291..3942187 | + | 897 | Protein_3729 | IS3 family transposase ISSd1 | Transposase |
| D9V54_RS19455 () | 3942341..3944338 | + | 1998 | WP_032215506.1 | choline BCCT transporter BetT | - |
| D9V54_RS19465 () | 3944401..3945678 | + | 1278 | WP_001375347.1 | DUF2254 domain-containing protein | - |
| D9V54_RS19470 () | 3945926..3946582 | + | 657 | WP_000145475.1 | hypothetical protein | VF |
| D9V54_RS19480 () | 3946763..3946873 | - | 111 | WP_126123275.1 | alcohol dehydrogenase | - |
| D9V54_RS25270 () | 3947862..3948088 | + | 227 | Protein_3734 | acetolactate synthase small subunit | - |
| D9V54_RS19505 () | 3948090..3948872 | - | 783 | WP_001295538.1 | DeoR family transcriptional regulator | - |
| D9V54_RS19510 () | 3949178..3950098 | + | 921 | WP_000350265.1 | ribokinase | - |
| D9V54_RS19515 () | 3950126..3951442 | + | 1317 | WP_000998347.1 | L-fucose:H+ symporter permease | - |
| D9V54_RS19520 () | 3951454..3952467 | + | 1014 | WP_000107480.1 | aldose 1-epimerase family protein | - |
| D9V54_RS19530 () | 3952657..3953885 | + | 1229 | WP_115205477.1 | IS3 family transposase IS2 | Transposase |
| D9V54_RS19535 () | 3954271..3954510 | + | 240 | WP_001446914.1 | IS66 family transposase IS682 | Transposase |
| D9V54_RS19540 () | 3954721..3955977 | - | 1257 | WP_000345346.1 | PTS ascorbate transporter subunit IIC | - |
| D9V54_RS19545 () | 3955990..3956277 | - | 288 | WP_000705931.1 | PTS sugar transporter subunit IIB | - |
| D9V54_RS19550 () | 3956293..3956736 | - | 444 | WP_000916805.1 | PTS sugar transporter subunit IIA | - |
| D9V54_RS19555 () | 3957007..3958038 | + | 1032 | WP_000416153.1 | LacI family DNA-binding transcriptional regulator | - |
| D9V54_RS19560 () | 3958166..3958489 | + | 324 | Protein_3745 | IS110 family transposase | - |
| D9V54_RS19565 () | 3958763..3959371 | - | 609 | WP_073978005.1 | maturase | - |
| D9V54_RS19570 () | 3959389..3959835 | - | 447 | WP_001352292.1 | RNA-directed DNA polymerase | - |
| D9V54_RS25105 () | 3960732..3961058 | + | 327 | WP_001352291.1 | IS21 family transposase ISSso4 | Transposase |
| D9V54_RS19585 () | 3961268..3961621 | - | 354 | WP_049254365.1 | hypothetical protein | - |
| D9V54_RS19590 () | 3961591..3961782 | + | 192 | Protein_3750 | HNH endonuclease | - |
| D9V54_RS19595 () | 3961869..3962891 | + | 1023 | WP_000255944.1 | IS21 family transposase IS100kyp | Transposase |
| D9V54_RS19600 () | 3962888..3963670 | + | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| D9V54_RS19610 () | 3963946..3964851 | - | 906 | Protein_3753 | IS3 family transposase ISLad1 | Transposase |
| D9V54_RS19615 () | 3964861..3966012 | - | 1152 | WP_001254928.1 | IS30 family transposase IS30D | Transposase |
| D9V54_RS19620 () | 3966080..3966337 | - | 258 | Protein_3755 | IS3 family transposase IS911 | Transposase |
| D9V54_RS19625 () | 3966410..3966537 | - | 128 | Protein_3756 | IS1 family transposase | - |
| D9V54_RS19630 () | 3966605..3967644 | + | 1040 | Protein_3757 | DUF1837 domain-containing protein | - |
| D9V54_RS19635 () | 3967625..3970182 | + | 2558 | Protein_3758 | DEAD/DEAH box helicase | - |
| D9V54_RS19645 () | 3970225..3971490 | - | 1266 | WP_000772679.1 | hypothetical protein ; Integrase | Integrase |
| D9V54_RS25110 () | 3971917..3972063 | - | 147 | WP_001290178.1 | hypothetical protein | - |
| D9V54_RS19655 () | 3972148..3972345 | - | 198 | WP_001327226.1 | DUF957 domain-containing protein | - |
| D9V54_RS19660 () | 3972365..3972853 | - | 489 | WP_000761685.1 | hypothetical protein | - |
| D9V54_RS19665 () | 3972850..3973227 | - | 378 | WP_001094444.1 | TA system toxin CbtA family protein | Toxin Detail |
| D9V54_RS19670 () | 3973317..3973685 | - | 369 | WP_001285607.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| D9V54_RS19675 () | 3973765..3973986 | - | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| D9V54_RS19680 () | 3974073..3974549 | - | 477 | WP_001384029.1 | RadC family protein | - |
| D9V54_RS19685 () | 3974564..3975049 | - | 486 | WP_000213722.1 | antirestriction protein | - |
| D9V54_RS19690 () | 3975141..3975959 | - | 819 | WP_001175175.1 | DUF945 domain-containing protein | - |
| D9V54_RS19695 () | 3976049..3976258 | - | 210 | WP_032150870.1 | DUF905 family protein | - |
| D9V54_RS19700 () | 3976288..3976965 | - | 678 | WP_001097301.1 | hypothetical protein | - |
| D9V54_RS19705 () | 3977113..3977793 | - | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| D9V54_RS19710 () | 3977996..3978880 | - | 885 | WP_000010408.1 | 50S ribosome-binding GTPase | - |
| D9V54_RS19715 () | 3979065..3980195 | + | 1131 | WP_047928958.1 | hypothetical protein | - |
| D9V54_RS19720 () | 3981676..3982407 | + | 732 | WP_001075464.1 | inovirus Gp2 family protein | - |
| D9V54_RS19725 () | 3982735..3983613 | + | 879 | WP_000769116.1 | restriction endonuclease | - |
| D9V54_RS19730 () | 3983667..3984241 | + | 575 | Protein_3776 | transposase | - |
| D9V54_RS19735 () | 3984374..3985149 | - | 776 | Protein_3777 | DDE-type integrase/transposase/recombinase | - |
| D9V54_RS19740 () | 3985370..3985810 | + | 441 | WP_000038139.1 | H-NS histone family protein | - |
| D9V54_RS19745 () | 3986079..3986207 | + | 129 | Protein_3779 | IS256 family transposase | - |
| D9V54_RS19750 () | 3986237..3986586 | - | 350 | Protein_3780 | IS21 family transposase | - |
| D9V54_RS19755 () | 3987620..3988186 | + | 567 | WP_001126820.1 | inovirus-type Gp2 protein | - |
| D9V54_RS19760 () | 3988434..3989009 | + | 576 | WP_000991584.1 | hypothetical protein | - |
| D9V54_RS19765 () | 3989078..3989314 | + | 237 | WP_000958149.1 | AlpA family transcriptional regulator | - |
| D9V54_RS25115 () | 3989311..3989469 | + | 159 | WP_000831911.1 | hypothetical protein | - |
| D9V54_RS19770 () | 3989557..3990105 | + | 549 | WP_001167422.1 | hypothetical protein | - |
| D9V54_RS19775 () | 3990124..3990469 | - | 346 | Protein_3786 | prop effector | - |
| D9V54_RS19780 () | 3990466..3990639 | - | 174 | WP_000258195.1 | hypothetical protein | - |
| D9V54_RS19785 () | 3991102..3992187 | + | 1086 | WP_000179014.1 | DNA sulfur modification protein DndB | - |
| D9V54_RS19790 () | 3992184..3993818 | + | 1635 | WP_000041168.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|