MGE detailed information
MGE type: Genomic_island MGE length: 73196 bp
Accession: NZ_CP032989 Location: 858385..931580 Organism: Escherichia coli strain W2-5 Replicon: chromosome
Accession: NZ_CP032989 Location: 858385..931580 Organism: Escherichia coli strain W2-5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9V55_RS04380 () | 853683..854270 | + | 588 | WP_000946201.1 | type 1 fimbrial protein | - |
| D9V55_RS04385 () | 854391..856901 | + | 2511 | WP_000739801.1 | fimbria/pilus outer membrane usher protein | - |
| D9V55_RS04390 () | 856970..857701 | + | 732 | WP_001171049.1 | fimbria/pilus periplasmic chaperone | - |
| D9V55_RS04395 () | 857738..858301 | + | 564 | WP_001077947.1 | nuclease PIN | - |
| D9V55_RS04400 () | 858385..858903 | + | 519 | WP_042096980.1 | fimbrial protein | - |
| D9V55_RS04405 () | 858926..859918 | + | 993 | WP_000878336.1 | hypothetical protein | - |
| D9V55_RS04410 () | 859971..860753 | + | 783 | WP_000481332.1 | EAL domain-containing protein | - |
| D9V55_RS04415 () | 861023..861217 | - | 195 | Protein_828 | transposase | - |
| D9V55_RS04420 () | 861546..861788 | - | 243 | Protein_829 | IS110 family transposase | - |
| D9V55_RS04425 () | 862370..863635 | - | 1266 | WP_032171996.1 | integrase arm-type DNA-binding domain-containing protein | - |
| D9V55_RS04430 () | 864099..864425 | - | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| D9V55_RS04435 () | 864422..864685 | - | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| D9V55_RS04440 () | 864757..865623 | - | 867 | WP_032153714.1 | DUF4942 domain-containing protein | - |
| D9V55_RS04445 () | 865708..865905 | - | 198 | WP_000839265.1 | DUF957 domain-containing protein | - |
| D9V55_RS04450 () | 865917..866408 | - | 492 | WP_023155722.1 | hypothetical protein | - |
| D9V55_RS04455 () | 866405..866782 | - | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| D9V55_RS04460 () | 866829..867203 | - | 375 | WP_032153712.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| D9V55_RS04465 () | 867283..867504 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| D9V55_RS04470 () | 867573..868049 | - | 477 | WP_001186715.1 | RadC family protein | - |
| D9V55_RS04480 () | 868065..868550 | - | 486 | WP_032153711.1 | antirestriction protein | - |
| D9V55_RS04485 () | 868642..869460 | - | 819 | WP_001234693.1 | DUF945 domain-containing protein | - |
| D9V55_RS04490 () | 869551..869760 | - | 210 | WP_023155727.1 | DUF905 family protein | - |
| D9V55_RS04495 () | 869790..870467 | - | 678 | WP_023155728.1 | hypothetical protein | - |
| D9V55_RS04500 () | 870586..871470 | - | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| D9V55_RS04505 () | 871577..872509 | + | 933 | WP_023155730.1 | hypothetical protein | - |
| D9V55_RS04510 () | 872506..873315 | - | 810 | WP_032153709.1 | hypothetical protein | - |
| D9V55_RS04525 () | 875066..875797 | + | 732 | WP_032153707.1 | inovirus Gp2 family protein | - |
| D9V55_RS04530 () | 875891..876548 | - | 658 | Protein_848 | transposase | - |
| D9V55_RS04535 () | 876982..878586 | + | 1605 | WP_001067608.1 | DUF3987 domain-containing protein | - |
| D9V55_RS04540 () | 880183..880749 | + | 567 | WP_032153705.1 | inovirus-type Gp2 protein | - |
| D9V55_RS25285 () | 880869..881018 | - | 150 | WP_001421645.1 | hypothetical protein | - |
| D9V55_RS25290 () | 881033..881605 | + | 573 | WP_032153703.1 | hypothetical protein | - |
| D9V55_RS04550 () | 881674..881910 | + | 237 | WP_000958154.1 | AlpA family transcriptional regulator | - |
| D9V55_RS04555 () | 882179..882727 | + | 549 | WP_121636694.1 | hypothetical protein | - |
| D9V55_RS25615 () | 882746..882994 | - | 249 | WP_001349534.1 | osmoprotectant transport activator ProQ | - |
| D9V55_RS25620 () | 883063..883254 | - | 192 | WP_001323513.1 | hypothetical protein | - |
| D9V55_RS04575 () | 883657..884348 | - | 692 | Protein_857 | IS1 family transposase | - |
| D9V55_RS04580 () | 884408..884584 | + | 177 | Protein_858 | transketolase family protein | - |
| D9V55_RS04585 () | 884847..884960 | + | 114 | WP_131501864.1 | transposase | - |
| D9V55_RS04595 () | 885811..886377 | + | 567 | WP_000919994.1 | hypothetical protein | - |
| D9V55_RS04605 () | 886618..887433 | + | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| D9V55_RS04610 () | 887494..888297 | + | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| D9V55_RS04615 () | 888297..889133 | + | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| D9V55_RS04625 () | 889439..889681 | + | 243 | WP_000844627.1 | transposase | - |
| D9V55_RS04630 () | 889713..890363 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| D9V55_RS04635 () | 890469..891668 | + | 1200 | WP_032153701.1 | tetracycline efflux MFS transporter Tet(A) | - |
| D9V55_RS04640 () | 891635..891823 | - | 189 | Protein_867 | IS91 family transposase | - |
| D9V55_RS04645 () | 891935..892240 | - | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| D9V55_RS04650 () | 892268..893482 | - | 1215 | WP_023300759.1 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| D9V55_RS25625 () | 893699..894145 | - | 447 | Protein_870 | DUF3363 domain-containing protein | - |
| D9V55_RS04660 () | 894614..895270 | - | 657 | Protein_871 | IS91-like element ISVsa3 family transposase | - |
| D9V55_RS04665 () | 895204..895482 | - | 279 | WP_001349530.1 | FaeA/PapI family transcriptional regulator | - |
| D9V55_RS04680 () | 895905..896219 | + | 315 | WP_000930062.1 | major pilus subunit operon regulatory protein PapB | - |
| D9V55_RS04685 () | 896426..896689 | + | 264 | Protein_874 | P fimbria major subunit PapA | - |
| D9V55_RS04695 () | 897140..898372 | - | 1233 | WP_000271619.1 | dNTP triphosphohydrolase | - |
| D9V55_RS04700 () | 898523..899684 | - | 1162 | Protein_876 | IS3 family transposase | - |
| D9V55_RS04705 () | 899852..900832 | + | 981 | WP_000174035.1 | thymidylate synthase | - |
| D9V55_RS04710 () | 900829..901773 | + | 945 | WP_000820616.1 | hypothetical protein | - |
| D9V55_RS04715 () | 901776..902858 | - | 1083 | WP_000637419.1 | XRE family transcriptional regulator | - |
| D9V55_RS04725 () | 903325..903591 | + | 267 | WP_032153698.1 | MazG-like family protein | - |
| D9V55_RS04730 () | 903891..904405 | - | 515 | Protein_881 | transposase | - |
| D9V55_RS04740 () | 905013..908426 | + | 3414 | WP_000438165.1 | DEAD/DEAH box helicase family protein | - |
| D9V55_RS04745 () | 908490..910124 | + | 1635 | WP_000627728.1 | type I restriction-modification system subunit M | - |
| D9V55_RS04750 () | 910121..911263 | + | 1143 | WP_000742120.1 | restriction endonuclease subunit S | - |
| D9V55_RS04755 () | 911272..912894 | + | 1623 | WP_000778955.1 | AAA family ATPase | - |
| D9V55_RS04760 () | 912894..913790 | + | 897 | WP_000499115.1 | hypothetical protein | - |
| D9V55_RS04765 () | 914013..914242 | - | 230 | Protein_887 | integrase | - |
| D9V55_RS04770 () | 914421..915158 | + | 738 | WP_001398114.1 | porin family protein | - |
| D9V55_RS04775 () | 915578..916474 | + | 897 | WP_000228490.1 | WYL domain-containing protein | - |
| D9V55_RS04780 () | 916523..917602 | + | 1080 | WP_001207396.1 | hypothetical protein | - |
| D9V55_RS04785 () | 917649..919220 | + | 1572 | WP_001100182.1 | ATP--cob(I)alamin adenosyltransferase | - |
| D9V55_RS04790 () | 919217..919483 | + | 267 | WP_000766274.1 | YkgJ family cysteine cluster protein | - |
| D9V55_RS04795 () | 919623..919820 | + | 198 | WP_001238004.1 | hypothetical protein | - |
| D9V55_RS04805 () | 919873..921546 | + | 1674 | WP_025492097.1 | phosphoethanolamine transferase | - |
| D9V55_RS04810 () | 921690..922724 | - | 1035 | WP_032153697.1 | tetratricopeptide repeat family protein | - |
| D9V55_RS04815 () | 922774..923135 | + | 362 | Protein_896 | IS1 family transposase | - |
| D9V55_RS25300 () | 923124..923411 | + | 288 | Protein_897 | integrase core domain-containing protein | - |
| D9V55_RS04825 () | 923989..925383 | - | 1395 | WP_001037798.1 | carbohydrate porin | - |
| D9V55_RS04830 () | 925578..927011 | - | 1434 | WP_024144973.1 | glycoside hydrolase family 32 protein | - |
| D9V55_RS04835 () | 927008..928285 | - | 1278 | WP_001083368.1 | MFS transporter | - |
| D9V55_RS04840 () | 928348..930474 | - | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| D9V55_RS04845 () | 930570..931580 | - | 1011 | WP_000053331.1 | substrate-binding domain-containing protein | - |
| D9V55_RS04850 () | 931730..932914 | - | 1185 | WP_001218742.1 | tyrosine-type recombinase/integrase | - |
| D9V55_RS04860 () | 933272..933979 | - | 708 | WP_000234504.1 | DUF554 domain-containing protein | - |
| D9V55_RS25755 () | 934132..934215 | + | 84 | WP_212734346.1 | hypothetical protein | - |
| D9V55_RS04870 () | 934377..936512 | + | 2136 | WP_000839767.1 | ornithine decarboxylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|