MGE detailed information
MGE type: Mobilizable plasmid MGE length: 84688 bp
Accession: NZ_CP032988 Location: 1..84688 Organism: Escherichia coli strain BE2-5 Replicon: plasmid p2_BE2-5
Accession: NZ_CP032988 Location: 1..84688 Organism: Escherichia coli strain BE2-5 Replicon: plasmid p2_BE2-5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9V56_RS23235 () | 508..1402 | - | 895 | Protein_1 | HNH endonuclease | - |
| D9V56_RS23240 () | 2037..3010 | + | 974 | Protein_2 | sensor domain-containing diguanylate cyclase | - |
| D9V56_RS23250 () | 3578..3928 | + | 351 | WP_000493378.1 | hypothetical protein | - |
| D9V56_RS23255 () | 3979..4722 | + | 744 | WP_000129823.1 | hypothetical protein | - |
| D9V56_RS23260 () | 4719..5495 | + | 777 | WP_000015958.1 | site-specific integrase | - |
| D9V56_RS23265 () | 5553..5810 | - | 258 | WP_000764642.1 | hypothetical protein | - |
| D9V56_RS24005 () | 5939..6043 | - | 105 | WP_032409716.1 | hypothetical protein | - |
| D9V56_RS23270 () | 6573..7439 | + | 867 | WP_004118283.1 | replication initiation protein | - |
| D9V56_RS23275 () | 7616..7885 | - | 270 | WP_000339857.1 | hypothetical protein | - |
| D9V56_RS23280 () | 8300..9505 | + | 1206 | WP_000368714.1 | AAA family ATPase | - |
| D9V56_RS23285 () | 9505..10479 | + | 975 | WP_000064119.1 | ParB/RepB/Spo0J family partition protein | - |
| D9V56_RS23290 () | 10561..11832 | - | 1272 | WP_047671986.1 | Y-family DNA polymerase | - |
| D9V56_RS23295 () | 11832..12263 | - | 432 | WP_000776034.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| D9V56_RS23305 () | 12669..14156 | + | 1488 | Protein_14 | group II intron reverse transcriptase/maturase | - |
| D9V56_RS23310 () | 14308..15005 | + | 698 | Protein_15 | IS1 family transposase | - |
| D9V56_RS23315 () | 15015..15323 | + | 309 | Protein_16 | RepB family plasmid replication initiator protein | - |
| D9V56_RS23330 () | 16800..17768 | + | 969 | WP_030005799.1 | IS5 family transposase IS903B | Transposase |
| D9V56_RS23340 () | 17908..18294 | - | 387 | WP_001039464.1 | hypothetical protein | - |
| D9V56_RS23345 () | 18976..20727 | - | 1752 | Protein_19 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| D9V56_RS23350 () | 20716..21123 | + | 408 | WP_001214976.1 | cysteine hydrolase | - |
| D9V56_RS23355 () | 21261..22145 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| D9V56_RS23360 () | 22177..23376 | - | 1200 | WP_001493765.1 | Tetracycline resistance protein, class C | ARG |
| D9V56_RS23365 () | 23482..24132 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| D9V56_RS23370 () | 24164..24406 | - | 243 | WP_000844627.1 | transposase | - |
| D9V56_RS23375 () | 24464..27430 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| D9V56_RS23380 () | 27434..27994 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| D9V56_RS24025 () | 28170..28520 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| D9V56_RS23390 () | 28723..29736 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| D9V56_RS23395 () | 29884..30381 | + | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| D9V56_RS23400 () | 30493..30783 | + | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| D9V56_RS23405 () | 30789..31580 | + | 792 | WP_001206356.1 | Streptomycin 3''-adenylyltransferase | ARG |
| D9V56_RS23410 () | 31842..33101 | + | 1260 | WP_000095725.1 | Bicyclomycin resistance protein | ARG |
| D9V56_RS23415 () | 33194..33985 | + | 792 | WP_001206316.1 | Streptomycin 3''-adenylyltransferase | ARG |
| D9V56_RS23420 () | 34155..34487 | + | 333 | WP_121689862.1 | quaternary ammonium compound efflux SMR transporter QacL | - |
| D9V56_RS23430 () | 34752..35387 | - | 636 | Protein_35 | IS256 family transposase IS406 | Transposase |
| D9V56_RS24030 () | 35389..35664 | + | 276 | WP_109023896.1 | hypothetical protein | - |
| D9V56_RS23435 () | 35667..36458 | - | 792 | WP_000034420.1 | Dihydropteroate synthase | ARG |
| D9V56_RS23440 () | 36927..37172 | - | 246 | WP_001354008.1 | GrpB family protein | - |
| D9V56_RS23445 () | 37210..38073 | - | 864 | WP_000612791.1 | SDR family oxidoreductase | - |
| D9V56_RS23450 () | 38219..38458 | - | 240 | WP_011264039.1 | macrolide transporter | - |
| D9V56_RS23455 () | 38531..39235 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| D9V56_RS23460 () | 39386..40201 | + | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| D9V56_RS23465 () | 40391..41095 | - | 705 | WP_001067834.1 | IS6 family transposase IS26 | Transposase |
| D9V56_RS23470 () | 41160..42107 | + | 948 | Protein_44 | Methyl-accepting chemotaxis protein McpQ | VF |
| D9V56_RS23475 () | 42270..43202 | + | 933 | WP_113444969.1 | IS5 family transposase IS903 | Transposase |
| D9V56_RS23480 () | 43260..43343 | - | 84 | Protein_46 | SOS response-associated peptidase | - |
| D9V56_RS23490 () | 43788..44072 | + | 285 | WP_058672119.1 | Tn3 family transposase | - |
| D9V56_RS23495 () | 44271..45275 | - | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| D9V56_RS23500 () | 45693..47129 | - | 1437 | WP_000105383.1 | glutathione synthase | - |
| D9V56_RS23510 () | 47396..48100 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| D9V56_RS23520 () | 48193..48501 | - | 309 | Protein_51 | RepB family plasmid replication initiator protein | - |
| D9V56_RS23525 () | 48511..49208 | - | 698 | Protein_52 | IS1 family transposase IS1R | Transposase |
| D9V56_RS23530 () | 49283..49564 | - | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D9V56_RS23535 () | 49554..49805 | - | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| D9V56_RS23550 () | 51039..51875 | + | 837 | WP_001050931.1 | replication initiation protein | - |
| D9V56_RS23555 () | 51915..52361 | + | 447 | Protein_56 | hypothetical protein | - |
| D9V56_RS23560 () | 52429..52854 | + | 426 | WP_000202942.1 | hypothetical protein | - |
| D9V56_RS23565 () | 52851..53828 | - | 978 | WP_024245156.1 | hypothetical protein | - |
| D9V56_RS23570 () | 53853..54134 | - | 282 | WP_001185482.1 | hypothetical protein | - |
| D9V56_RS23575 () | 54232..54894 | - | 663 | WP_000516402.1 | peptidyl-arginine deiminase | - |
| D9V56_RS23580 () | 55275..55919 | + | 645 | WP_000203396.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| D9V56_RS23585 () | 56074..56157 | - | 84 | WP_000565612.1 | hypothetical protein | - |
| D9V56_RS23590 () | 56586..56924 | - | 339 | Protein_63 | helix-turn-helix domain-containing protein | - |
| D9V56_RS23595 () | 56940..57637 | - | 698 | Protein_64 | IS1 family transposase IS1R | Transposase |
| D9V56_RS23600 () | 57693..57944 | + | 252 | Protein_65 | IS200/IS605 family transposase | - |
| D9V56_RS23605 () | 58136..58330 | - | 195 | WP_053273080.1 | hypothetical protein | - |
| D9V56_RS23610 () | 58632..59329 | - | 698 | Protein_67 | IS1 family transposase IS1S | Transposase |
| D9V56_RS23615 () | 59385..61136 | + | 1752 | Protein_68 | Outer membrane usher protein PapC | VF |
| D9V56_RS23620 () | 61259..61963 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| D9V56_RS23625 () | 62111..64384 | + | 2274 | WP_032319017.1 | thiosulfate reductase PhsA | - |
| D9V56_RS23630 () | 64399..64977 | + | 579 | WP_016153548.1 | thiosulfate reductase electron transport protein PhsB | - |
| D9V56_RS23635 () | 64974..65741 | + | 768 | WP_032319018.1 | thiosulfate reductase cytochrome B subunit | - |
| D9V56_RS23640 () | 65880..66083 | + | 204 | Protein_73 | serine-type D-Ala-D-Ala carboxypeptidase | - |
| D9V56_RS23645 () | 66148..66852 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| D9V56_RS23650 () | 66798..67457 | - | 660 | WP_077898834.1 | SprT-like domain-containing protein | - |
| D9V56_RS23655 () | 67741..68397 | - | 657 | WP_012537714.1 | Pentapeptide repeat protein | ARG |
| D9V56_RS23660 () | 68823..69197 | + | 375 | WP_046788578.1 | helix-turn-helix domain-containing protein | - |
| D9V56_RS23665 () | 69364..70068 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| D9V56_RS23675 () | 70169..70309 | + | 141 | Protein_79 | IS6 family transposase IS15 | Transposase |
| D9V56_RS23680 () | 70366..71070 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| D9V56_RS23685 () | 71233..71583 | + | 351 | WP_001132147.1 | Murein DD-endopeptidase MepM | VF |
| D9V56_RS23690 () | 71617..71814 | - | 198 | WP_000843496.1 | DUF2933 domain-containing protein | - |
| D9V56_RS23695 () | 71855..74332 | - | 2478 | WP_001398208.1 | Ag(+)-translocating P-type ATPase SilP | - |
| D9V56_RS23700 () | 74429..74869 | - | 441 | WP_000758221.1 | hypothetical protein | - |
| D9V56_RS23705 () | 74956..78102 | - | 3147 | WP_000574035.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| D9V56_RS23710 () | 78113..79405 | - | 1293 | WP_001398209.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| D9V56_RS23715 () | 79519..79872 | - | 354 | WP_001246155.1 | cation efflux system protein CusF | - |
| D9V56_RS23720 () | 79900..81285 | - | 1386 | WP_000475512.1 | Cation efflux system protein CusC | VF |
| D9V56_RS23725 () | 81475..82155 | + | 681 | WP_000697969.1 | Transcriptional regulatory protein CusR | VF |
| D9V56_RS23730 () | 82148..83623 | + | 1476 | WP_000555737.1 | copper/silver sensor histidine kinase SilS | - |
| D9V56_RS23735 () | 83874..84305 | + | 432 | WP_000790483.1 | silver-binding protein SilE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|