MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 27761 bp
Accession: NZ_CP032911 Location: 457929..485689 Organism: Helicobacter pylori strain 19-A-EK3 Replicon: chromosome
Accession: NZ_CP032911 Location: 457929..485689 Organism: Helicobacter pylori strain 19-A-EK3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D4H43_RS02295 () | 454725..455282 | + | 558 | WP_164500424.1 | hypothetical protein | - |
| D4H43_RS02300 () | 455333..455620 | + | 288 | WP_053574735.1 | hypothetical protein | - |
| D4H43_RS02305 () | 455890..456013 | + | 124 | Protein_430 | DNA adenine methylase | - |
| D4H43_RS02310 () | 456227..457051 | + | 825 | WP_097568619.1 | mechanosensitive ion channel family protein | - |
| D4H43_RS08360 () | 457339..457523 | + | 185 | Protein_432 | hypothetical protein | - |
| D4H43_RS02320 () | 457704..457853 | - | 150 | WP_127985952.1 | type II restriction endonuclease | - |
| D4H43_RS02325 () | 457893..458999 | - | 1107 | WP_128008304.1 | DUF1887 family protein | - |
| D4H43_RS02330 () | 459222..459503 | - | 282 | WP_000921926.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| D4H43_RS02335 () | 459496..459810 | - | 315 | WP_139543876.1 | hypothetical protein | Antitoxin Detail |
| D4H43_RS02340 () | 460092..462003 | + | 1912 | Protein_437 | relaxase/mobilization nuclease domain-containing protein | - |
| D4H43_RS02345 () | 462027..463211 | - | 1185 | WP_139543877.1 | hypothetical protein | - |
| D4H43_RS02350 () | 463255..463539 | - | 285 | WP_000394651.1 | hypothetical protein | - |
| D4H43_RS02355 () | 463622..464278 | - | 657 | WP_139543878.1 | ParA family protein | - |
| D4H43_RS02360 () | 464546..470258 | - | 5713 | Protein_441 | DEAD/DEAH box helicase | - |
| D4H43_RS08325 () | 470963..471103 | + | 141 | WP_161593947.1 | hypothetical protein | - |
| D4H43_RS02365 () | 471179..472327 | - | 1149 | WP_139543879.1 | IS200-IS605 family transposase ISHp608 | Transposase |
| D4H43_RS02370 () | 472296..472763 | - | 468 | WP_000063685.1 | IS200-IS605 family transposase ISHp608 | Transposase |
| D4H43_RS02375 () | 472940..474763 | - | 1824 | Protein_445 | helicase | - |
| D4H43_RS02380 () | 474918..475955 | + | 1038 | WP_139543880.1 | hypothetical protein | - |
| D4H43_RS02385 () | 475956..477350 | + | 1395 | WP_139543881.1 | hypothetical protein | - |
| D4H43_RS02390 () | 477393..479564 | + | 2172 | WP_139543882.1 | competence protein | - |
| D4H43_RS02395 () | 479574..480974 | + | 1401 | WP_139543883.1 | hypothetical protein | - |
| D4H43_RS02400 () | 481024..481302 | + | 279 | WP_000477187.1 | hypothetical protein | - |
| D4H43_RS02405 () | 481304..482566 | + | 1263 | WP_139544625.1 | P-type conjugative transfer protein TrbL | - |
| D4H43_RS02410 () | 482639..483322 | + | 684 | WP_139543884.1 | CAAX protease | - |
| D4H43_RS02415 () | 483404..484477 | - | 1074 | WP_139543885.1 | Tyrosine recombinase XerH ; Integrase | Integrase |
| D4H43_RS02420 () | 484524..485094 | - | 571 | Protein_454 | hypothetical protein | - |
| D4H43_RS02425 () | 485087..488180 | - | 3094 | Protein_455 | DUF2357 domain-containing protein | - |
| D4H43_RS02430 () | 488187..489379 | - | 1193 | Protein_456 | restriction endonuclease | - |
| D4H43_RS02435 () | 489488..489667 | - | 180 | WP_139544626.1 | hypothetical protein | - |
| D4H43_RS08365 () | 490115..490330 | - | 216 | Protein_458 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|