MGE detailed information
MGE type: Conjugative plasmid MGE length: 109553 bp
Accession: NZ_CP032888 Location: 1..109553 Organism: Escherichia coli strain SCEC020022 Replicon: plasmid pCTXM14_020022
Accession: NZ_CP032888 Location: 1..109553 Organism: Escherichia coli strain SCEC020022 Replicon: plasmid pCTXM14_020022
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7V31_RS00835 () | 46..1077 | + | 1032 | WP_000907866.1 | replication initiation protein | - |
| C7V31_RS27190 () | 1775..1990 | + | 216 | WP_000841013.1 | hypothetical protein | - |
| C7V31_RS00855 () | 1987..2979 | + | 993 | WP_001579760.1 | hypothetical protein | - |
| C7V31_RS00860 () | 3038..3655 | - | 618 | WP_000521604.1 | hypothetical protein | - |
| C7V31_RS00865 () | 3850..5406 | - | 1557 | WP_001579759.1 | AAA family ATPase | - |
| C7V31_RS00870 () | 5671..6261 | - | 591 | WP_000194568.1 | hypothetical protein | - |
| C7V31_RS00875 () | 6261..6518 | - | 258 | WP_000371888.1 | hypothetical protein | - |
| C7V31_RS00880 () | 6847..7950 | + | 1104 | WP_001127573.1 | nucleotide-binding protein | - |
| C7V31_RS00885 () | 7980..9110 | + | 1131 | WP_000542417.1 | DUF4238 domain-containing protein | - |
| C7V31_RS00890 () | 9110..9400 | + | 291 | WP_001229373.1 | hypothetical protein | - |
| C7V31_RS00895 () | 9525..10229 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| C7V31_RS00900 () | 10282..10539 | - | 258 | Protein_11 | IS21-like element ISEc57 family helper ATPase IstB | - |
| C7V31_RS00905 () | 10539..11564 | - | 1026 | WP_021545039.1 | IS21-like element ISEc57 family transposase | - |
| C7V31_RS00910 () | 11653..11814 | - | 162 | Protein_13 | IS91 family transposase | - |
| C7V31_RS00915 () | 11926..12231 | - | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| C7V31_RS00920 () | 12259..13473 | - | 1215 | WP_058100717.1 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| C7V31_RS27535 () | 13690..14136 | - | 447 | Protein_16 | DUF3363 domain-containing protein | - |
| C7V31_RS00930 () | 14605..16098 | - | 1494 | WP_015344975.1 | IS91-like element ISVsa3 family transposase | - |
| C7V31_RS00935 () | 16309..16533 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| C7V31_RS00940 () | 16606..17310 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| C7V31_RS00945 () | 17456..18469 | - | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| C7V31_RS00950 () | 18761..19315 | + | 555 | WP_063840321.1 | fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5 | - |
| C7V31_RS00955 () | 19412..19864 | + | 453 | WP_001749986.1 | NAD(+)--rifampin ADP-ribosyltransferase Arr-3 | - |
| C7V31_RS00960 () | 19997..20470 | + | 474 | WP_001749985.1 | trimethoprim-resistant dihydrofolate reductase DfrA27 | - |
| C7V31_RS00965 () | 20651..21496 | + | 846 | WP_001749984.1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA16 | - |
| C7V31_RS00970 () | 21613..21960 | + | 348 | WP_000679427.1 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| C7V31_RS00975 () | 21954..22793 | + | 840 | WP_000259031.1 | sulfonamide-resistant dihydropteroate synthase Sul1 | - |
| C7V31_RS00980 () | 23198..24739 | + | 1542 | WP_000050481.1 | IS91 family transposase | - |
| C7V31_RS00985 () | 25066..25941 | + | 876 | WP_001617865.1 | class A extended-spectrum beta-lactamase CTX-M-14 | - |
| C7V31_RS00990 () | 26405..27034 | + | 630 | WP_024266332.1 | hypothetical protein | - |
| C7V31_RS00995 () | 27665..28006 | - | 342 | Protein_30 | hypothetical protein | - |
| C7V31_RS01000 () | 28003..28590 | - | 588 | WP_004187392.1 | restriction endonuclease | - |
| C7V31_RS01005 () | 28583..28831 | - | 249 | WP_004187394.1 | helix-turn-helix domain-containing protein | - |
| C7V31_RS01010 () | 28828..29289 | - | 462 | WP_004187397.1 | hypothetical protein | - |
| C7V31_RS01015 () | 29430..29879 | + | 450 | Protein_34 | hypothetical protein | - |
| C7V31_RS01020 () | 29943..30647 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| C7V31_RS01025 () | 30670..30801 | + | 132 | Protein_36 | resolvase | - |
| C7V31_RS01030 () | 30939..31214 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| C7V31_RS01035 () | 31208..31852 | - | 645 | WP_000633913.1 | AAA family ATPase | - |
| C7V31_RS01040 () | 32081..33052 | + | 972 | WP_001103690.1 | hypothetical protein | - |
| C7V31_RS01045 () | 33057..33449 | + | 393 | WP_162984797.1 | plasmid partitioning/stability family protein | - |
| C7V31_RS01050 () | 33454..34725 | - | 1272 | WP_000457523.1 | Y-family DNA polymerase | - |
| C7V31_RS01055 () | 34725..35162 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C7V31_RS01060 () | 35159..35407 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| C7V31_RS01070 () | 35825..36727 | + | 903 | WP_072748701.1 | DUF1281 domain-containing protein | - |
| C7V31_RS01075 () | 36724..37035 | + | 312 | WP_032072582.1 | hypothetical protein | - |
| C7V31_RS01080 () | 37112..37795 | + | 684 | WP_000086147.1 | DNA methylase | - |
| C7V31_RS01085 () | 37796..38017 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| C7V31_RS01090 () | 38031..38465 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| C7V31_RS27540 () | 38511..39287 | + | 777 | WP_001005023.1 | hypothetical protein | - |
| C7V31_RS01105 () | 39822..40124 | + | 303 | WP_077249901.1 | antirestriction protein | - |
| C7V31_RS01110 () | 40171..40593 | + | 423 | WP_000271744.1 | DUF1380 family protein | - |
| C7V31_RS01115 () | 40590..40781 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| C7V31_RS01130 () | 41059..42726 | - | 1668 | WP_012372796.1 | group II intron reverse transcriptase/maturase | - |
| C7V31_RS01140 () | 43893..44420 | + | 528 | WP_001276107.1 | single-stranded DNA-binding protein | - |
| C7V31_RS01145 () | 44478..44711 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| C7V31_RS01150 () | 44770..46728 | + | 1959 | WP_001145485.1 | ParB/RepB/Spo0J family partition protein | - |
| C7V31_RS01155 () | 46783..47217 | + | 435 | WP_001387500.1 | conjugation system SOS inhibitor PsiB | - |
| C7V31_RS01160 () | 47214..47933 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| C7V31_RS01165 () | 47930..48388 | + | 459 | WP_001579745.1 | hypothetical protein | - |
| C7V31_RS01175 () | 48988..49488 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| C7V31_RS01190 () | 50217..50651 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| C7V31_RS01195 () | 50745..51011 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| C7V31_RS01200 () | 51076..52002 | + | 927 | WP_000038402.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| C7V31_RS01205 () | 52025..52222 | + | 198 | WP_001348086.1 | hypothetical protein | - |
| C7V31_RS01210 () | 52253..52504 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| C7V31_RS27545 () | 52538..52735 | - | 198 | WP_001161115.1 | hypothetical protein | - |
| C7V31_RS01225 () | 53084..53821 | + | 738 | WP_121540876.1 | DUF4942 domain-containing protein | - |
| C7V31_RS01230 () | 53913..54245 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| C7V31_RS01235 () | 54256..56955 | + | 2700 | WP_001405892.1 | IncI1-type relaxase NikB | - |
| C7V31_RS01240 () | 56992..59283 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| C7V31_RS01245 () | 59276..60346 | - | 1071 | WP_000151582.1 | IncI1-type conjugal transfer protein TrbB | - |
| C7V31_RS01250 () | 60365..61573 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 61753..61813 | - | 61 | NuclAT_1 | - | - |
| - () | 61753..61813 | - | 61 | NuclAT_1 | - | - |
| - () | 61753..61813 | - | 61 | NuclAT_1 | - | - |
| - () | 61753..61813 | - | 61 | NuclAT_1 | - | - |
| C7V31_RS01255 () | 61880..62971 | - | 1092 | WP_000426061.1 | hypothetical protein | - |
| - () | 63174..63236 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 63174..63236 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 63174..63236 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 63174..63236 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| C7V31_RS01260 () | 63286..63438 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| C7V31_RS01265 () | 63510..63761 | - | 252 | WP_001291968.1 | hypothetical protein | - |
| - () | 64148..64199 | - | 52 | NuclAT_2 | - | - |
| - () | 64148..64199 | - | 52 | NuclAT_2 | - | - |
| - () | 64148..64199 | - | 52 | NuclAT_2 | - | - |
| - () | 64148..64199 | - | 52 | NuclAT_2 | - | - |
| C7V31_RS27195 () | 64685..64861 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| C7V31_RS01280 () | 65070..65279 | - | 210 | WP_001140545.1 | hemolysin expression modulator Hha | - |
| C7V31_RS01285 () | 65377..65991 | - | 615 | WP_000578649.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| C7V31_RS01290 () | 66067..68235 | - | 2169 | WP_000698360.1 | IncI1-type conjugal transfer membrane protein TraY | - |
| C7V31_RS01295 () | 68332..68916 | - | 585 | WP_001579774.1 | IncI1-type conjugal transfer protein TraX | - |
| C7V31_RS01300 () | 68945..70147 | - | 1203 | WP_001189159.1 | IncI1-type conjugal transfer protein TraW | - |
| C7V31_RS01305 () | 70114..70728 | - | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| C7V31_RS01310 () | 70728..73772 | - | 3045 | WP_001024752.1 | IncI1-type conjugal transfer protein TraU | - |
| C7V31_RS01315 () | 73862..74662 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| C7V31_RS01320 () | 74646..74834 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| C7V31_RS01325 () | 74898..75302 | - | 405 | WP_001579770.1 | hypothetical protein | - |
| C7V31_RS01330 () | 75353..75880 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| C7V31_RS01335 () | 75880..76584 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| C7V31_RS01340 () | 76584..77873 | - | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
| C7V31_RS01345 () | 77876..78859 | - | 984 | WP_001579769.1 | IncI1-type conjugal transfer protein TraN | - |
| C7V31_RS01350 () | 78870..79562 | - | 693 | WP_087526040.1 | DotI/IcmL family type IV secretion protein | - |
| C7V31_RS01355 () | 79559..79906 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| C7V31_RS01360 () | 79924..83691 | - | 3768 | WP_001579768.1 | hypothetical protein | - |
| C7V31_RS01365 () | 83781..84332 | - | 552 | WP_000014584.1 | phospholipase D family protein | - |
| C7V31_RS01370 () | 84347..84637 | - | 291 | WP_001372180.1 | hypothetical protein | - |
| C7V31_RS01375 () | 84634..85782 | - | 1149 | WP_001024972.1 | plasmid transfer ATPase TraJ | - |
| C7V31_RS01380 () | 85779..86597 | - | 819 | WP_000646097.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| C7V31_RS01385 () | 86594..87052 | - | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| C7V31_RS01390 () | 87447..88031 | - | 585 | WP_001579766.1 | histidine phosphatase family protein | - |
| C7V31_RS01395 () | 88091..89293 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| C7V31_RS01400 () | 89379..90203 | - | 825 | WP_001238929.1 | hypothetical protein | - |
| C7V31_RS01405 () | 90354..91508 | - | 1155 | WP_001139958.1 | integrase | - |
| C7V31_RS01435 () | 93029..93277 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| C7V31_RS01440 () | 93274..94566 | - | 1293 | WP_001417545.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| C7V31_RS01445 () | 94566..95222 | - | 657 | WP_001193553.1 | prepilin peptidase | - |
| C7V31_RS01450 () | 95207..95767 | - | 561 | WP_000014116.1 | lytic transglycosylase domain-containing protein | - |
| C7V31_RS01455 () | 95777..96391 | - | 615 | WP_000959786.1 | pilus assembly protein PilX | - |
| C7V31_RS01460 () | 96409..97506 | - | 1098 | WP_001208805.1 | type II secretion system F family protein | - |
| C7V31_RS01465 () | 97519..99072 | - | 1554 | WP_001579763.1 | Flp pilus assembly complex ATPase component TadA | - |
| C7V31_RS01470 () | 99083..99535 | - | 453 | WP_001247334.1 | type IV pilus biogenesis protein PilP | - |
| C7V31_RS01475 () | 99522..100817 | - | 1296 | WP_000752772.1 | type 4b pilus protein PilO2 | - |
| C7V31_RS01480 () | 100810..102492 | - | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| C7V31_RS01485 () | 102506..102943 | - | 438 | WP_000539807.1 | type IV pilus biogenesis protein PilM | - |
| C7V31_RS01490 () | 102943..104010 | - | 1068 | WP_087526044.1 | type IV pilus biogenesis lipoprotein PilL | - |
| C7V31_RS01500 () | 104634..104930 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| C7V31_RS01505 () | 105106..105360 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| C7V31_RS01515 () | 105522..106073 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| C7V31_RS01525 () | 106246..106929 | - | 684 | WP_087526043.1 | conjugal transfer protein TraC | - |
| C7V31_RS01535 () | 107183..107716 | - | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| C7V31_RS01545 () | 108158..108445 | - | 288 | WP_205589771.1 | conjugal transfer protein TraA | - |
| C7V31_RS01550 () | 108363..108626 | - | 264 | WP_001387472.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|