MGE detailed information
MGE type: Genomic_island MGE length: 83909 bp
Accession: NZ_CP032879 Location: 1931830..2015738 Organism: Escherichia coli strain WCHEC000837 Replicon: chromosome
Accession: NZ_CP032879 Location: 1931830..2015738 Organism: Escherichia coli strain WCHEC000837 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9N32_RS11560 () | 1927201..1928385 | + | 1185 | WP_001218742.1 | tyrosine-type recombinase/integrase | - |
| D9N32_RS11565 () | 1928535..1929545 | + | 1011 | WP_000053331.1 | substrate-binding domain-containing protein | - |
| D9N32_RS11570 () | 1929641..1931767 | + | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| D9N32_RS11575 () | 1931830..1933107 | + | 1278 | WP_001083368.1 | MFS transporter | - |
| D9N32_RS11580 () | 1933104..1934537 | + | 1434 | WP_024144973.1 | glycoside hydrolase family 32 protein | - |
| D9N32_RS11585 () | 1934732..1936126 | + | 1395 | WP_001037798.1 | carbohydrate porin | - |
| D9N32_RS27545 () | 1936704..1936991 | - | 288 | Protein_1834 | transposase | - |
| D9N32_RS11595 () | 1936980..1937341 | - | 362 | Protein_1835 | IS1 family transposase IS1A | Transposase |
| D9N32_RS11600 () | 1937391..1938425 | + | 1035 | WP_032153697.1 | tetratricopeptide repeat family protein | - |
| D9N32_RS11605 () | 1938569..1940242 | - | 1674 | WP_025492097.1 | phosphoethanolamine transferase | - |
| D9N32_RS11615 () | 1940295..1940492 | - | 198 | WP_001238004.1 | hypothetical protein | - |
| D9N32_RS11620 () | 1940632..1940898 | - | 267 | WP_000766274.1 | YkgJ family cysteine cluster protein | - |
| D9N32_RS11625 () | 1940895..1942466 | - | 1572 | WP_001100182.1 | ATP--cob(I)alamin adenosyltransferase | - |
| D9N32_RS11630 () | 1942513..1943592 | - | 1080 | WP_001207396.1 | hypothetical protein | - |
| D9N32_RS11635 () | 1943641..1944537 | - | 897 | WP_000228490.1 | WYL domain-containing protein | - |
| D9N32_RS11640 () | 1944957..1945694 | - | 738 | WP_001398114.1 | porin family protein | - |
| D9N32_RS11645 () | 1945873..1946102 | + | 230 | Protein_1844 | integrase | - |
| D9N32_RS11650 () | 1946325..1947221 | - | 897 | WP_000499115.1 | hypothetical protein | - |
| D9N32_RS11655 () | 1947221..1948843 | - | 1623 | WP_000778955.1 | AAA family ATPase | - |
| D9N32_RS11660 () | 1948852..1949994 | - | 1143 | WP_000742120.1 | restriction endonuclease subunit S | - |
| D9N32_RS11665 () | 1949991..1951625 | - | 1635 | WP_000627728.1 | type I restriction-modification system subunit M | - |
| D9N32_RS11670 () | 1951689..1955102 | - | 3414 | WP_000438165.1 | DEAD/DEAH box helicase family protein | - |
| D9N32_RS11680 () | 1955710..1956224 | + | 515 | Protein_1850 | ISL3 family transposase ISEc38 | Transposase |
| D9N32_RS11685 () | 1956524..1956790 | - | 267 | WP_032153698.1 | MazG-like family protein | - |
| D9N32_RS11695 () | 1957257..1958339 | + | 1083 | WP_000637419.1 | XRE family transcriptional regulator | - |
| D9N32_RS11700 () | 1958342..1959286 | - | 945 | WP_000820616.1 | hypothetical protein | - |
| D9N32_RS11705 () | 1959283..1960263 | - | 981 | WP_000174035.1 | thymidylate synthase | - |
| D9N32_RS11710 () | 1960431..1961592 | + | 1162 | Protein_1855 | IS3 family transposase IS3 | Transposase |
| D9N32_RS11715 () | 1961743..1962975 | + | 1233 | WP_000271619.1 | dNTP triphosphohydrolase | - |
| D9N32_RS11725 () | 1963426..1963689 | - | 264 | Protein_1857 | Pap fimbrial major pilin protein | VF |
| D9N32_RS11730 () | 1963896..1964210 | - | 315 | WP_000930062.1 | Major pilu subunit operon regulatory protein PapB | VF |
| D9N32_RS11745 () | 1964633..1964911 | + | 279 | WP_001349530.1 | P fimbrial regulatory protein KS71A | VF |
| D9N32_RS11750 () | 1964845..1965501 | + | 657 | Protein_1860 | IS91 family transposase ISVsa3 | Transposase |
| D9N32_RS27785 () | 1965970..1966416 | + | 447 | Protein_1861 | DUF3363 domain-containing protein | - |
| D9N32_RS11760 () | 1966633..1967847 | + | 1215 | WP_023300759.1 | Bicyclomycin resistance protein | ARG |
| D9N32_RS11765 () | 1967875..1968180 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| D9N32_RS11770 () | 1968292..1968480 | + | 189 | Protein_1864 | IS91 family transposase | - |
| D9N32_RS11775 () | 1968447..1969646 | - | 1200 | WP_032153701.1 | Tetracycline resistance protein, class C | ARG |
| D9N32_RS11780 () | 1969752..1970402 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| D9N32_RS11785 () | 1970434..1970676 | - | 243 | WP_000844627.1 | transposase | - |
| D9N32_RS11795 () | 1970982..1971818 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| D9N32_RS11800 () | 1971818..1972621 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| D9N32_RS11805 () | 1972682..1973497 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| D9N32_RS11815 () | 1973738..1974304 | - | 567 | WP_000919994.1 | hypothetical protein | - |
| D9N32_RS11825 () | 1975155..1975268 | - | 114 | WP_131501864.1 | transposase | - |
| D9N32_RS11830 () | 1975531..1975707 | - | 177 | Protein_1873 | transketolase family protein | - |
| D9N32_RS11835 () | 1975767..1976458 | + | 692 | Protein_1874 | IS1 family transposase | - |
| D9N32_RS27790 () | 1978197..1978388 | + | 192 | WP_001323513.1 | hypothetical protein | - |
| D9N32_RS27795 () | 1978457..1978705 | + | 249 | WP_001349534.1 | osmoprotectant transport activator ProQ | - |
| D9N32_RS11860 () | 1978724..1979272 | - | 549 | WP_032153702.1 | hypothetical protein | - |
| D9N32_RS11865 () | 1979541..1979777 | - | 237 | WP_000958154.1 | AlpA family transcriptional regulator | - |
| D9N32_RS27555 () | 1979846..1980418 | - | 573 | WP_032153703.1 | hypothetical protein | - |
| D9N32_RS27560 () | 1980433..1980582 | + | 150 | WP_001421645.1 | hypothetical protein | - |
| D9N32_RS11875 () | 1980702..1981268 | - | 567 | WP_032153705.1 | inovirus-type Gp2 protein | - |
| D9N32_RS11880 () | 1982865..1984469 | - | 1605 | WP_001067608.1 | DUF3987 domain-containing protein | - |
| D9N32_RS11885 () | 1984903..1985560 | + | 658 | Protein_1884 | transposase | - |
| D9N32_RS11890 () | 1985654..1986385 | - | 732 | WP_032153707.1 | inovirus Gp2 family protein | - |
| D9N32_RS11905 () | 1988136..1988945 | + | 810 | WP_032153709.1 | hypothetical protein | - |
| D9N32_RS11910 () | 1988942..1989874 | - | 933 | WP_023155730.1 | hypothetical protein | - |
| D9N32_RS11915 () | 1989981..1990865 | + | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| D9N32_RS11920 () | 1990984..1991661 | + | 678 | WP_023155728.1 | hypothetical protein | - |
| D9N32_RS11925 () | 1991691..1991900 | + | 210 | WP_023155727.1 | DUF905 family protein | - |
| D9N32_RS11930 () | 1991991..1992809 | + | 819 | WP_001234693.1 | DUF945 domain-containing protein | - |
| D9N32_RS11935 () | 1992901..1993386 | + | 486 | WP_032153711.1 | antirestriction protein | - |
| D9N32_RS11945 () | 1993402..1993878 | + | 477 | WP_001186715.1 | RadC family protein | - |
| D9N32_RS11950 () | 1993947..1994168 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| D9N32_RS11955 () | 1994248..1994622 | + | 375 | WP_032153712.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| D9N32_RS11960 () | 1994669..1995046 | + | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| D9N32_RS11965 () | 1995043..1995534 | + | 492 | WP_023155722.1 | hypothetical protein | - |
| D9N32_RS11970 () | 1995546..1995743 | + | 198 | WP_000839265.1 | DUF957 domain-containing protein | - |
| D9N32_RS11975 () | 1995828..1996694 | + | 867 | WP_032153714.1 | DUF4942 domain-containing protein | - |
| D9N32_RS11980 () | 1996766..1997029 | + | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| D9N32_RS11985 () | 1997026..1997352 | + | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| D9N32_RS11990 () | 1997828..1997998 | + | 171 | Protein_1902 | IS110 family transposase | - |
| D9N32_RS11995 () | 1998809..1999792 | + | 984 | WP_024181915.1 | Arabinose 5-phosphate isomerase KpsF | VF |
| D9N32_RS12000 () | 1999864..2001012 | + | 1149 | WP_000905931.1 | hypothetical protein | VF |
| D9N32_RS12005 () | 2001036..2002712 | + | 1677 | WP_012767757.1 | Polysialic acid transport protein KpsD | VF |
| D9N32_RS12010 () | 2002722..2003462 | + | 741 | WP_000030740.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| D9N32_RS12015 () | 2003459..2005486 | + | 2028 | WP_000579244.1 | hypothetical protein | VF |
| D9N32_RS12020 () | 2005521..2006753 | + | 1233 | WP_001153641.1 | hypothetical protein | VF |
| D9N32_RS12025 () | 2007007..2007966 | - | 960 | WP_000991482.1 | hypothetical protein | - |
| D9N32_RS12030 () | 2008001..2009140 | - | 1140 | WP_000069818.1 | hypothetical protein | VF |
| D9N32_RS12035 () | 2009715..2011088 | - | 1374 | WP_000789018.1 | Bifunctional ribulose 5-phosphate reductase/CDP-ribitol pyrophosphorylase Bcs1 | VF |
| D9N32_RS12040 () | 2011106..2012482 | - | 1377 | WP_012777785.1 | hypothetical protein | VF |
| D9N32_RS12045 () | 2012691..2013368 | - | 678 | WP_087503488.1 | Polysialic acid transport ATP-binding protein KpsT | VF |
| D9N32_RS12050 () | 2013365..2014141 | - | 777 | WP_000124290.1 | Polysialic acid transport protein KpsM | VF |
| D9N32_RS12055 () | 2015202..2015738 | - | 537 | WP_000942810.1 | Type II secretion system protein M | VF |
| D9N32_RS12060 () | 2015740..2016918 | - | 1179 | WP_000094981.1 | type II secretion system protein GspL | - |
| D9N32_RS12065 () | 2016915..2017892 | - | 978 | WP_000633200.1 | type II secretion system minor pseudopilin GspK | - |
| D9N32_RS12070 () | 2017889..2018494 | - | 606 | WP_023147221.1 | type II secretion system minor pseudopilin GspJ | - |
| D9N32_RS12075 () | 2018491..2018862 | - | 372 | WP_000820109.1 | type II secretion system minor pseudopilin GspI | - |
| D9N32_RS12080 () | 2018859..2019422 | - | 564 | WP_001115147.1 | type II secretion system minor pseudopilin GspH | - |
| D9N32_RS12085 () | 2019426..2019881 | - | 456 | WP_001087296.1 | type II secretion system major pseudopilin GspG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|