MGE detailed information
MGE type: IScluster/Tn MGE length: 19354 bp
Accession: NZ_CP032870 Location: 40207..59560 Organism: Pseudomonas syringae pv. actinidiae strain P220 Replicon: plasmid pLKQG722
Accession: NZ_CP032870 Location: 40207..59560 Organism: Pseudomonas syringae pv. actinidiae strain P220 Replicon: plasmid pLKQG722
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9N00_RS00225 () | 35310..35933 | - | 624 | WP_017684946.1 | glycoside hydrolase family 25 protein | - |
| D9N00_RS00230 () | 36182..36538 | - | 357 | WP_017684945.1 | hypothetical protein | - |
| D9N00_RS00235 () | 36548..37579 | - | 1032 | WP_017704948.1 | P-type DNA transfer ATPase VirB11 | - |
| D9N00_RS00240 () | 37589..38959 | - | 1371 | WP_017684943.1 | TrbI/VirB10 family protein | - |
| D9N00_RS00245 () | 38946..39755 | - | 810 | WP_017684942.1 | P-type conjugative transfer protein VirB9 | - |
| D9N00_RS00250 () | 39745..40050 | - | 306 | WP_017706770.1 | type IV secretion system protein | - |
| D9N00_RS00255 () | 40138..41717 | + | 1580 | WP_085991147.1 | IS3 family transposase ISPsy31 | Transposase |
| D9N00_RS00260 () | 41757..42341 | + | 585 | Protein_38 | Oxygen regulatory protein NreC | VF |
| D9N00_RS00265 () | 42473..42823 | - | 351 | WP_017685123.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D9N00_RS00270 () | 42839..43087 | - | 249 | WP_017685122.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| D9N00_RS00275 () | 43428..44390 | + | 963 | WP_017685121.1 | tyrosine-type recombinase/integrase | - |
| D9N00_RS00285 () | 44588..45655 | - | 1068 | WP_074556923.1 | IS630 family transposase ISPsy32 | Transposase |
| D9N00_RS32270 () | 47972..48259 | + | 288 | WP_153303634.1 | hypothetical protein | - |
| D9N00_RS00305 () | 48396..48734 | + | 339 | WP_017685230.1 | hypothetical protein | - |
| D9N00_RS00310 () | 48805..50384 | + | 1580 | WP_099818608.1 | IS3 family transposase ISPsy31 | Transposase |
| D9N00_RS00320 () | 51666..51926 | + | 261 | Protein_48 | hypothetical protein | - |
| D9N00_RS00325 () | 51969..52223 | + | 255 | WP_003381350.1 | hypothetical protein | - |
| D9N00_RS00330 () | 52628..53167 | + | 540 | WP_017685167.1 | hypothetical protein | - |
| D9N00_RS00335 () | 53446..54623 | + | 1178 | WP_164706461.1 | IS3 family transposase ISPsy28 | Transposase |
| D9N00_RS00340 () | 54676..55086 | - | 411 | Protein_52 | ParA family protein | - |
| D9N00_RS00345 () | 55466..56086 | + | 621 | WP_005769724.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| D9N00_RS00355 () | 56412..56633 | - | 222 | WP_004666801.1 | hypothetical protein | - |
| D9N00_RS00360 () | 56671..57084 | - | 414 | WP_017685173.1 | TraR/DksA family transcriptional regulator | - |
| D9N00_RS00365 () | 57114..57338 | - | 225 | WP_017699623.1 | carbon storage regulator | - |
| D9N00_RS00370 () | 57606..57785 | - | 180 | WP_017685223.1 | hypothetical protein | - |
| D9N00_RS00375 () | 57981..59560 | + | 1580 | WP_099818608.1 | IS3 family transposase ISPsy31 | Transposase |
| D9N00_RS00380 () | 60013..60552 | - | 540 | WP_017685039.1 | hypothetical protein | - |
| D9N00_RS00385 () | 60642..60872 | - | 231 | WP_017685038.1 | hypothetical protein | - |
| D9N00_RS00390 () | 60910..61326 | - | 417 | WP_017685037.1 | hypothetical protein | - |
| D9N00_RS00400 () | 61881..62126 | - | 246 | WP_017685036.1 | hypothetical protein | - |
| D9N00_RS00405 () | 62867..63091 | + | 225 | Protein_63 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|