MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 77771 bp
Accession: NZ_CP032870 Location: 1..77771 Organism: Pseudomonas syringae pv. actinidiae strain P220 Replicon: plasmid pLKQG722
Accession: NZ_CP032870 Location: 1..77771 Organism: Pseudomonas syringae pv. actinidiae strain P220 Replicon: plasmid pLKQG722
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9N00_RS00025 () | 4336..4956 | - | 621 | WP_005769724.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| D9N00_RS00035 () | 5224..6516 | + | 1293 | WP_017685048.1 | glycoside hydrolase family 68 protein | - |
| D9N00_RS00055 () | 7493..8443 | - | 951 | WP_017685047.1 | alpha/beta fold hydrolase | - |
| D9N00_RS00060 () | 8430..9338 | - | 909 | WP_017685046.1 | EamA family transporter | - |
| D9N00_RS00065 () | 9341..9958 | - | 618 | WP_017699540.1 | flavodoxin family protein | - |
| D9N00_RS00070 () | 9962..10645 | - | 684 | WP_003319174.1 | iron-containing redox enzyme family protein | - |
| D9N00_RS00075 () | 10647..11192 | - | 546 | WP_005734707.1 | hypothetical protein | - |
| D9N00_RS00080 () | 11199..12551 | - | 1353 | WP_017684531.1 | phenylacetate--CoA ligase family protein | - |
| D9N00_RS00085 () | 13181..14647 | + | 1467 | WP_005734708.1 | 2-amino-4-deoxychorismate synthase | VF |
| D9N00_RS00090 () | 14644..15237 | + | 594 | WP_005734709.1 | aminodeoxychorismate/anthranilate synthase component II | - |
| D9N00_RS00095 () | 15295..16137 | + | 843 | WP_005734710.1 | Transcriptional activator protein LasR | VF |
| D9N00_RS00105 () | 16432..18387 | - | 1956 | WP_017684529.1 | Protein TraI | Relaxase |
| D9N00_RS00110 () | 18398..18727 | - | 330 | WP_003344297.1 | ribbon-helix-helix protein, CopG family | - |
| D9N00_RS00115 () | 18981..19325 | + | 345 | WP_017684528.1 | hypothetical protein | - |
| D9N00_RS00125 () | 19623..19901 | + | 279 | WP_017684526.1 | hypothetical protein | - |
| D9N00_RS00130 () | 19967..20167 | - | 201 | WP_017684525.1 | hypothetical protein | - |
| D9N00_RS00135 () | 20235..21071 | - | 837 | WP_017684524.1 | DUF945 domain-containing protein | - |
| D9N00_RS00140 () | 21118..21495 | - | 378 | WP_003344294.1 | hypothetical protein | - |
| D9N00_RS00155 () | 22526..23071 | - | 546 | Protein_19 | IS5 family transposase ISPsy19 | Transposase |
| D9N00_RS00160 () | 23245..24876 | + | 1632 | WP_020358614.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| D9N00_RS00170 () | 25335..25571 | + | 237 | Protein_21 | Tn3 family transposase ISPsy42 | Transposase |
| D9N00_RS00175 () | 25639..26016 | + | 378 | WP_004666662.1 | hypothetical protein | - |
| D9N00_RS00185 () | 26177..26572 | - | 396 | WP_004666661.1 | type II toxin-antitoxin system VapC family toxin | - |
| D9N00_RS00190 () | 26569..26820 | - | 252 | WP_003108276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| D9N00_RS00195 () | 27000..27572 | + | 573 | WP_004666660.1 | Tn3 family transposase ISPsy42 | Transposase |
| D9N00_RS00200 () | 27601..30630 | + | 3030 | WP_017682807.1 | Tn3 family transposase ISPsy42 | Transposase |
| D9N00_RS00205 () | 30653..32551 | - | 1899 | WP_017684961.1 | DNA topoisomerase III | - |
| D9N00_RS00210 () | 32579..32941 | - | 363 | WP_015060690.1 | IncN plasmid killer protein | - |
| D9N00_RS00215 () | 32982..34634 | - | 1653 | WP_017684962.1 | type IV secretory system conjugative DNA transfer family protein | - |
| D9N00_RS00220 () | 34634..34864 | - | 231 | WP_017684963.1 | hypothetical protein | - |
| D9N00_RS00225 () | 35310..35933 | - | 624 | WP_017684946.1 | glycoside hydrolase family 25 protein | - |
| D9N00_RS00230 () | 36182..36538 | - | 357 | WP_017684945.1 | hypothetical protein | - |
| D9N00_RS00235 () | 36548..37579 | - | 1032 | WP_017704948.1 | Type IV secretion system protein VirB11 | VF |
| D9N00_RS00240 () | 37589..38959 | - | 1371 | WP_017684943.1 | Type IV secretion system protein virB10 | VF |
| D9N00_RS00245 () | 38946..39755 | - | 810 | WP_017684942.1 | P-type conjugative transfer protein VirB9 | - |
| D9N00_RS00250 () | 39745..40050 | - | 306 | WP_017706770.1 | hypothetical protein | VF |
| D9N00_RS00255 () | 40138..41717 | + | 1580 | WP_085991147.1 | IS3 family transposase ISPsy31 | Transposase |
| D9N00_RS00260 () | 41757..42341 | + | 585 | Protein_38 | Oxygen regulatory protein NreC | VF |
| D9N00_RS00265 () | 42473..42823 | - | 351 | WP_017685123.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D9N00_RS00270 () | 42839..43087 | - | 249 | WP_017685122.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| D9N00_RS00275 () | 43428..44390 | + | 963 | WP_017685121.1 | tyrosine-type recombinase/integrase | - |
| D9N00_RS00285 () | 44588..45655 | - | 1068 | WP_074556923.1 | IS630 family transposase ISPsy32 | Transposase |
| D9N00_RS32270 () | 47972..48259 | + | 288 | WP_153303634.1 | hypothetical protein | - |
| D9N00_RS00305 () | 48396..48734 | + | 339 | WP_017685230.1 | hypothetical protein | - |
| D9N00_RS00310 () | 48805..50384 | + | 1580 | WP_099818608.1 | IS3 family transposase ISPsy31 | Transposase |
| D9N00_RS00320 () | 51666..51926 | + | 261 | Protein_48 | hypothetical protein | - |
| D9N00_RS00325 () | 51969..52223 | + | 255 | WP_003381350.1 | hypothetical protein | - |
| D9N00_RS00330 () | 52628..53167 | + | 540 | WP_017685167.1 | hypothetical protein | - |
| D9N00_RS00335 () | 53446..54623 | + | 1178 | WP_164706461.1 | IS3 family transposase ISPsy28 | Transposase |
| D9N00_RS00340 () | 54676..55086 | - | 411 | Protein_52 | ParA family protein | - |
| D9N00_RS00345 () | 55466..56086 | + | 621 | WP_005769724.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| D9N00_RS00355 () | 56412..56633 | - | 222 | WP_004666801.1 | hypothetical protein | - |
| D9N00_RS00360 () | 56671..57084 | - | 414 | WP_017685173.1 | TraR/DksA family transcriptional regulator | - |
| D9N00_RS00365 () | 57114..57338 | - | 225 | WP_017699623.1 | carbon storage regulator | - |
| D9N00_RS00370 () | 57606..57785 | - | 180 | WP_017685223.1 | hypothetical protein | - |
| D9N00_RS00375 () | 57981..59560 | + | 1580 | WP_099818608.1 | IS3 family transposase ISPsy31 | Transposase |
| D9N00_RS00380 () | 60013..60552 | - | 540 | WP_017685039.1 | hypothetical protein | - |
| D9N00_RS00385 () | 60642..60872 | - | 231 | WP_017685038.1 | hypothetical protein | - |
| D9N00_RS00390 () | 60910..61326 | - | 417 | WP_017685037.1 | hypothetical protein | - |
| D9N00_RS00400 () | 61881..62126 | - | 246 | WP_017685036.1 | hypothetical protein | - |
| D9N00_RS00405 () | 62867..63091 | + | 225 | Protein_63 | transposase | - |
| D9N00_RS00410 () | 63235..65679 | - | 2445 | WP_017685035.1 | hypothetical protein | - |
| D9N00_RS00415 () | 66054..66656 | + | 603 | Protein_65 | type III effector | - |
| D9N00_RS00420 () | 66760..67533 | + | 774 | Protein_66 | type III effector | - |
| D9N00_RS00425 () | 67803..68263 | - | 461 | Protein_67 | SOS response-associated peptidase family protein | - |
| D9N00_RS00430 () | 68374..68922 | + | 549 | WP_017685033.1 | hypothetical protein | - |
| D9N00_RS32275 () | 69486..69641 | - | 156 | WP_153303633.1 | hypothetical protein | - |
| D9N00_RS00440 () | 69757..70413 | + | 657 | WP_017685030.1 | AAA family ATPase | - |
| D9N00_RS00445 () | 70510..70761 | + | 252 | WP_020316509.1 | ribbon-helix-helix protein, CopG family | - |
| D9N00_RS00450 () | 71337..71774 | - | 438 | WP_074291445.1 | DUF4113 domain-containing protein | - |
| D9N00_RS32280 () | 72249..72401 | + | 153 | WP_153303635.1 | hypothetical protein | - |
| D9N00_RS00460 () | 72461..72979 | - | 519 | WP_017684683.1 | DUF4113 domain-containing protein | - |
| D9N00_RS00470 () | 73573..73887 | - | 315 | WP_017684684.1 | HU family DNA-binding protein | - |
| D9N00_RS00475 () | 74099..75412 | - | 1314 | WP_017684685.1 | replication initiation protein | - |
| D9N00_RS00480 () | 75810..76037 | - | 228 | WP_017684686.1 | hypothetical protein | - |
| D9N00_RS00485 () | 76117..76545 | - | 429 | WP_017684687.1 | GntR family transcriptional regulator | - |
| D9N00_RS00490 () | 76733..77296 | - | 564 | WP_010206573.1 | hypothetical protein | - |
| D9N00_RS00495 () | 77317..77739 | - | 423 | WP_017684688.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|