MGE detailed information
MGE type: Prophage MGE length: 56311 bp
Accession: NZ_CP032821 Location: 2142575..2198885 Organism: Staphylococcus aureus strain JDFM SA01 Replicon: chromosome
Accession: NZ_CP032821 Location: 2142575..2198885 Organism: Staphylococcus aureus strain JDFM SA01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D5S13_RS10710 (D5S13_02046) | 2139812..2140873 | + | 1062 | WP_000063553.1 | PTS transporter subunit IIC | - |
| D5S13_RS10715 (D5S13_02047) | 2141131..2142588 | + | 1458 | WP_000649908.1 | ABC transporter permease subunit | - |
| D5S13_RS10720 (D5S13_02048) | 2142581..2143303 | + | 723 | WP_000590809.1 | hypothetical protein | VF |
| D5S13_RS10725 (D5S13_02049) | 2143454..2144581 | + | 1128 | WP_000379980.1 | tRNA epoxyqueuosine(34) reductase QueG | - |
| D5S13_RS10730 (D5S13_02050) | 2144586..2145056 | + | 471 | WP_000181394.1 | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | - |
| D5S13_RS10735 (D5S13_02051) | 2145215..2145814 | + | 600 | WP_001251224.1 | glucosamine-6-phosphate isomerase | Antitoxin Detail |
| D5S13_RS10740 (D5S13_02052) | 2145839..2145991 | + | 153 | WP_000031108.1 | SAS053 family protein | Toxin Detail |
| D5S13_RS10745 (D5S13_02053) | 2146539..2146934 | + | 396 | WP_000901023.1 | hypothetical protein | - |
| D5S13_RS10750 (D5S13_02054) | 2147130..2148515 | + | 1386 | WP_000116229.1 | class II fumarate hydratase | - |
| D5S13_RS10755 (D5S13_02055) | 2148967..2149788 | - | 822 | WP_000669376.1 | RluA family pseudouridine synthase | - |
| D5S13_RS10760 (D5S13_02056) | 2149951..2151063 | + | 1113 | WP_000437967.1 | GAF domain-containing sensor histidine kinase | - |
| D5S13_RS10765 (D5S13_02057) | 2151085..2151708 | + | 624 | WP_001045135.1 | hypothetical protein | VF |
| D5S13_RS10770 (D5S13_02058) | 2152064..2152528 | + | 465 | WP_000375864.1 | helix-turn-helix transcriptional regulator | - |
| D5S13_RS10775 (D5S13_02059) | 2152707..2153831 | + | 1125 | WP_000992526.1 | DUF445 domain-containing protein | - |
| D5S13_RS10780 (D5S13_02060) | 2153900..2154244 | + | 345 | WP_000290301.1 | YlbF/YmcA family competence regulator | - |
| D5S13_RS10785 | 2154737..2154835 | + | 99 | WP_001791795.1 | hypothetical protein | - |
| D5S13_RS10790 (D5S13_02061) | 2155132..2156328 | + | 1197 | WP_000238227.1 | exonuclease SbcCD subunit D | - |
| D5S13_RS10795 (D5S13_02062) | 2156318..2159254 | + | 2937 | WP_029625664.1 | AAA family ATPase | - |
| D5S13_RS10800 (D5S13_02063) | 2159251..2160192 | + | 942 | WP_001244175.1 | 3'-5' exoribonuclease YhaM | - |
| D5S13_RS10805 (D5S13_02064) | 2160313..2161275 | - | 963 | WP_000782121.1 | hypothetical protein | VF |
| D5S13_RS10810 (D5S13_02065) | 2161480..2162037 | - | 558 | WP_000477962.1 | DUF3267 domain-containing protein | - |
| D5S13_RS10815 (D5S13_02066) | 2162770..2163135 | - | 366 | WP_000648118.1 | YtxH domain-containing protein | - |
| D5S13_RS10820 (D5S13_02067) | 2163277..2163699 | - | 423 | WP_000004981.1 | HIT family protein | - |
| D5S13_RS10825 (D5S13_02068) | 2163833..2164573 | + | 741 | WP_000216874.1 | hypothetical protein | VF |
| D5S13_RS10830 (D5S13_02069) | 2164566..2165789 | + | 1224 | WP_001245771.1 | ABC transporter permease | - |
| D5S13_RS10835 (D5S13_02070) | 2165913..2166416 | - | 504 | WP_000737978.1 | signal transduction protein TRAP | - |
| D5S13_RS10840 | 2166579..2166689 | + | 111 | WP_042744719.1 | hypothetical protein | - |
| D5S13_RS10845 (D5S13_02071) | 2166679..2167716 | + | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| D5S13_RS10850 (D5S13_02072) | 2167774..2168697 | + | 924 | WP_000162881.1 | ferrochelatase | - |
| D5S13_RS10855 (D5S13_02073) | 2168721..2170121 | + | 1401 | WP_000167549.1 | protoporphyrinogen oxidase | - |
| D5S13_RS10860 (D5S13_02074) | 2170443..2170997 | + | 555 | WP_000132890.1 | alpha/beta hydrolase | - |
| D5S13_RS10905 (D5S13_02083) | 2173304..2174093 | - | 790 | Protein_2100 | DUF1829 domain-containing protein | - |
| D5S13_RS10910 | 2174130..2174657 | - | 528 | Protein_2101 | hypothetical protein | - |
| D5S13_RS10915 (D5S13_02085) | 2175456..2176391 | + | 936 | WP_000473594.1 | hypothetical protein | VF |
| D5S13_RS10920 (D5S13_02086) | 2176393..2177376 | + | 984 | WP_000782446.1 | hypothetical protein | VF |
| D5S13_RS10925 (D5S13_02087) | 2177746..2178537 | - | 792 | WP_000543844.1 | DUF1828 domain-containing protein | - |
| D5S13_RS10930 (D5S13_02088) | 2178542..2179015 | - | 474 | WP_000550252.1 | hypothetical protein | - |
| D5S13_RS10935 (D5S13_02089) | 2179201..2179489 | + | 289 | Protein_2106 | BsaG protein | - |
| D5S13_RS10940 (D5S13_02090) | 2179961..2180539 | - | 579 | WP_001092769.1 | DUF4888 domain-containing protein | - |
| D5S13_RS10945 (D5S13_02091) | 2181503..2182210 | + | 708 | WP_001039430.1 | hypothetical protein | VF |
| D5S13_RS10950 (D5S13_02092) | 2182335..2183057 | + | 723 | WP_001039447.1 | hypothetical protein | VF |
| D5S13_RS10955 (D5S13_02093) | 2183115..2183834 | + | 720 | WP_001038867.1 | hypothetical protein | VF |
| D5S13_RS10960 (D5S13_02094) | 2183955..2184674 | + | 720 | WP_001038706.1 | hypothetical protein | VF |
| D5S13_RS10965 (D5S13_02095) | 2184832..2185548 | + | 717 | WP_001038757.1 | hypothetical protein | VF |
| D5S13_RS10970 (D5S13_02096) | 2185699..2186418 | + | 720 | WP_001038715.1 | hypothetical protein | VF |
| D5S13_RS10975 | 2186483..2186617 | + | 135 | WP_031865257.1 | hypothetical protein | - |
| D5S13_RS10980 (D5S13_02097) | 2186782..2188338 | + | 1557 | WP_001566696.1 | type I restriction-modification system subunit M | - |
| D5S13_RS10985 (D5S13_02098) | 2188331..2189449 | + | 1119 | WP_000072558.1 | restriction endonuclease subunit S | - |
| D5S13_RS10990 (D5S13_02099) | 2190097..2190540 | + | 444 | WP_000742594.1 | DUF1433 domain-containing protein | - |
| D5S13_RS10995 (D5S13_02100) | 2190819..2191097 | + | 279 | WP_001798632.1 | DUF1433 domain-containing protein | - |
| D5S13_RS11000 (D5S13_02101) | 2191119..2191493 | + | 375 | WP_000695818.1 | DUF1433 domain-containing protein | - |
| D5S13_RS11005 | 2191681..2191863 | + | 183 | Protein_2120 | transposase | - |
| D5S13_RS11010 | 2191841..2191942 | - | 102 | WP_001791232.1 | hypothetical protein | - |
| - | 2191980..2192037 | + | 58 | - | - | Antitoxin Detail |
| D5S13_RS11015 | 2192065..2192160 | - | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| D5S13_RS11020 (D5S13_02102) | 2192611..2193057 | + | 447 | WP_000747802.1 | DUF1433 domain-containing protein | - |
| D5S13_RS11025 (D5S13_02103) | 2193742..2194125 | + | 384 | WP_000070811.1 | hypothetical protein | - |
| D5S13_RS11030 (D5S13_02104) | 2194136..2194312 | + | 177 | WP_000375476.1 | hypothetical protein | - |
| D5S13_RS11035 (D5S13_02105) | 2194612..2195240 | + | 629 | Protein_2126 | ImmA/IrrE family metallo-endopeptidase | - |
| D5S13_RS11040 | 2195438..2196010 | - | 573 | Protein_2127 | hypothetical protein | - |
| D5S13_RS11045 (D5S13_02108) | 2196111..2196452 | - | 342 | WP_000627548.1 | DUF3969 family protein | - |
| D5S13_RS11050 (D5S13_02109) | 2196493..2197119 | - | 627 | WP_000669019.1 | hypothetical protein | - |
| D5S13_RS11055 (D5S13_02110) | 2197195..2198190 | - | 996 | WP_000070647.1 | DUF4352 domain-containing protein | - |
| D5S13_RS11060 (D5S13_02111) | 2198271..2198921 | - | 651 | WP_001789021.1 | excalibur calcium-binding domain-containing protein | - |
| D5S13_RS11065 (D5S13_02112) | 2199224..2199679 | + | 456 | WP_072361838.1 | DUF4909 domain-containing protein | - |
| D5S13_RS11070 (D5S13_02113) | 2199838..2201316 | + | 1479 | WP_000348369.1 | o-succinylbenzoate--CoA ligase | - |
| D5S13_RS11075 (D5S13_02114) | 2201321..2202322 | + | 1002 | WP_000778537.1 | o-succinylbenzoate synthase | - |
| D5S13_RS11080 (D5S13_02115) | 2202319..2202576 | - | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| D5S13_RS11085 (D5S13_02116) | 2202642..2203115 | + | 474 | WP_263258452.1 | nucleoside triphosphatase YtkD | - |
| D5S13_RS11090 (D5S13_02117) | 2203120..2203866 | + | 747 | WP_072361841.1 | prolyl oligopeptidase family serine peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|