MGE detailed information
MGE type: Prophage MGE length: 75463 bp
Accession: NZ_CP032821 Location: 2023800..2099262 Organism: Staphylococcus aureus strain JDFM SA01 Replicon: chromosome
Accession: NZ_CP032821 Location: 2023800..2099262 Organism: Staphylococcus aureus strain JDFM SA01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D5S13_RS09935 | 2018987..2019067 | + | 81 | WP_000046022.1 | delta-hemolysin | - |
| D5S13_RS09940 (D5S13_01902) | 2019667..2020452 | - | 786 | WP_000867939.1 | carbon-nitrogen family hydrolase | - |
| D5S13_RS09945 (D5S13_01903) | 2020813..2021439 | - | 627 | WP_000522384.1 | nitroreductase family protein | - |
| D5S13_RS09950 (D5S13_01904) | 2021636..2022856 | + | 1221 | WP_029625647.1 | SdrH family protein | - |
| D5S13_RS09955 (D5S13_01905) | 2022881..2023624 | - | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease MroQ | - |
| D5S13_RS09960 (D5S13_01906) | 2023800..2024084 | + | 285 | WP_000917289.1 | co-chaperone GroES | - |
| D5S13_RS09965 (D5S13_01907) | 2024160..2025776 | + | 1617 | WP_000240642.1 | hypothetical protein | VF |
| D5S13_RS09970 (D5S13_01908) | 2025845..2027017 | - | 1173 | WP_000179353.1 | hypothetical protein ; Integrase | Integrase |
| D5S13_RS09975 (D5S13_01909) | 2027031..2027753 | - | 723 | WP_000672427.1 | helix-turn-helix transcriptional regulator | - |
| D5S13_RS09980 (D5S13_01910) | 2027906..2028112 | + | 207 | WP_000794657.1 | helix-turn-helix transcriptional regulator | - |
| D5S13_RS09985 (D5S13_01911) | 2028116..2028433 | + | 318 | WP_000481968.1 | helix-turn-helix domain-containing protein | - |
| D5S13_RS09990 (D5S13_01912) | 2028430..2028576 | + | 147 | WP_000708434.1 | hypothetical protein | - |
| D5S13_RS09995 (D5S13_01913) | 2028569..2028778 | + | 210 | WP_001058487.1 | hypothetical protein | Antitoxin Detail |
| D5S13_RS10000 (D5S13_01914) | 2028781..2029098 | + | 318 | WP_001103933.1 | DUF1474 family protein | Toxin Detail |
| D5S13_RS10005 (D5S13_01915) | 2029165..2030034 | + | 870 | WP_001002699.1 | primase alpha helix C-terminal domain-containing protein | - |
| D5S13_RS10010 (D5S13_01916) | 2030051..2031520 | + | 1470 | WP_001838755.1 | virulence-associated E family protein | - |
| D5S13_RS10015 (D5S13_01917) | 2031806..2032168 | + | 363 | WP_001039169.1 | hypothetical protein | - |
| D5S13_RS10020 (D5S13_01918) | 2032170..2032454 | + | 285 | WP_000998179.1 | hypothetical protein | - |
| D5S13_RS10025 (D5S13_01919) | 2032451..2033092 | + | 642 | WP_001019811.1 | hypothetical protein | - |
| D5S13_RS10030 (D5S13_01920) | 2033628..2033969 | + | 342 | WP_001190614.1 | hypothetical protein | - |
| D5S13_RS10035 (D5S13_01921) | 2034000..2034653 | + | 654 | WP_029625649.1 | hypothetical protein | - |
| D5S13_RS10040 (D5S13_01922) | 2034706..2035233 | + | 528 | WP_000771371.1 | spore coat protein | - |
| D5S13_RS10045 | 2035365..2035577 | + | 213 | WP_078065371.1 | pathogenicity island family protein | - |
| D5S13_RS10050 (D5S13_01924) | 2035574..2036143 | + | 570 | WP_001293084.1 | terminase small subunit | - |
| D5S13_RS10055 | 2036190..2036364 | + | 175 | Protein_1969 | terminase small subunit | - |
| D5S13_RS10060 (D5S13_01925) | 2036530..2037543 | + | 1014 | WP_029625650.1 | hypothetical protein | - |
| D5S13_RS10065 (D5S13_01926) | 2037556..2038023 | + | 468 | WP_029625651.1 | hypothetical protein | - |
| D5S13_RS10070 (D5S13_01927) | 2038276..2038488 | + | 213 | WP_031875240.1 | hypothetical protein | - |
| D5S13_RS10075 | 2038560..2038676 | + | 117 | Protein_1973 | hypothetical protein | - |
| D5S13_RS10080 (D5S13_01928) | 2039040..2039954 | + | 915 | WP_029625652.1 | hypothetical protein | VF |
| D5S13_RS10085 (D5S13_01929) | 2040012..2040860 | + | 849 | WP_000824908.1 | class I SAM-dependent methyltransferase | - |
| D5S13_RS10090 (D5S13_01930) | 2041752..2043059 | - | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| D5S13_RS10095 (D5S13_01931) | 2043947..2044390 | + | 444 | WP_000361985.1 | hypothetical protein | - |
| D5S13_RS10100 (D5S13_01932) | 2045113..2046336 | - | 1224 | WP_000206642.1 | ArgE/DapE family deacylase | - |
| D5S13_RS10105 (D5S13_01933) | 2046772..2047827 | + | 1056 | WP_263258448.1 | hypothetical protein | VF |
| D5S13_RS10110 (D5S13_01934) | 2047849..2048865 | + | 1017 | WP_000595393.1 | hypothetical protein | VF |
| D5S13_RS10115 (D5S13_01935) | 2049103..2050095 | - | 993 | WP_000239607.1 | hypothetical protein | VF |
| D5S13_RS10120 (D5S13_01936) | 2050484..2051887 | + | 1404 | Protein_1982 | hypothetical protein | VF |
| D5S13_RS10125 | 2051975..2052229 | + | 255 | WP_233185466.1 | hypothetical protein | VF |
| D5S13_RS10130 (D5S13_01937) | 2052244..2052534 | + | 291 | WP_000671712.1 | hypothetical protein | VF |
| D5S13_RS10135 (D5S13_01938) | 2052858..2054144 | - | 1287 | WP_001068523.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| D5S13_RS10140 | 2054344..2054442 | + | 99 | WP_000990056.1 | hypothetical protein | - |
| D5S13_RS10145 (D5S13_01939) | 2054685..2054861 | + | 177 | WP_000681968.1 | hypothetical protein | - |
| D5S13_RS10150 (D5S13_01940) | 2055120..2055500 | + | 381 | WP_000691587.1 | GntR family transcriptional regulator | - |
| D5S13_RS10155 (D5S13_01941) | 2055497..2056393 | + | 897 | WP_000991304.1 | hypothetical protein | VF |
| D5S13_RS10160 (D5S13_01942) | 2056394..2057074 | + | 681 | WP_000645736.1 | phenol-soluble modulin export ABC transporter permease subunit PmtB | - |
| D5S13_RS10165 (D5S13_01943) | 2057071..2057943 | + | 873 | WP_000763045.1 | phenol-soluble modulin export ABC transporter ATP-binding protein PmtC | - |
| D5S13_RS10170 (D5S13_01944) | 2057943..2058683 | + | 741 | WP_001221651.1 | phenol-soluble modulin export ABC transporter permease subunit PmtD | - |
| D5S13_RS10175 (D5S13_01945) | 2058749..2059312 | - | 564 | WP_000182842.1 | thioredoxin family protein | - |
| D5S13_RS10180 (D5S13_01946) | 2059433..2059957 | + | 525 | WP_000966288.1 | membrane protein | - |
| D5S13_RS10185 (D5S13_01947) | 2060017..2060574 | + | 558 | WP_001033971.1 | DUF1700 domain-containing protein | - |
| D5S13_RS10190 (D5S13_01948) | 2060571..2061413 | + | 843 | WP_000713071.1 | DUF4097 family beta strand repeat-containing protein | - |
| D5S13_RS10195 (D5S13_01949) | 2061470..2062510 | - | 1041 | WP_001188074.1 | C45 family autoproteolytic acyltransferase/hydolase | - |
| D5S13_RS10200 (D5S13_01950) | 2062961..2063134 | + | 174 | WP_000267034.1 | hypothetical protein | - |
| D5S13_RS10205 | 2063481..2063689 | + | 209 | Protein_1999 | IS5/IS1182 family transposase | - |
| D5S13_RS10210 (D5S13_01951) | 2063707..2064108 | - | 402 | WP_000205106.1 | YolD-like family protein | - |
| D5S13_RS10215 (D5S13_01952) | 2064378..2065406 | + | 1029 | WP_000181322.1 | beta-propeller fold lactonase family protein | - |
| D5S13_RS10220 (D5S13_01953) | 2065526..2066905 | - | 1380 | WP_001021219.1 | aldehyde dehydrogenase | - |
| D5S13_RS10225 | 2066956..2067129 | + | 174 | WP_072384913.1 | hypothetical protein | - |
| D5S13_RS10230 (D5S13_01954) | 2067322..2068251 | - | 930 | WP_001140871.1 | manganese-dependent inorganic pyrophosphatase | - |
| D5S13_RS10235 (D5S13_01955) | 2068304..2068864 | - | 561 | WP_000149686.1 | hypothetical protein | VF |
| D5S13_RS10240 (D5S13_01956) | 2069236..2070333 | + | 1098 | WP_000275709.1 | glycosyl hydrolase family 28-related protein | - |
| D5S13_RS10245 (D5S13_01957) | 2070538..2072100 | + | 1563 | WP_000323161.1 | SLC13 family permease | - |
| D5S13_RS10250 | 2072111..2072218 | - | 108 | WP_001802312.1 | hypothetical protein | - |
| D5S13_RS10255 (D5S13_01958) | 2072290..2073084 | - | 795 | WP_001177828.1 | prephenate dehydratase | - |
| D5S13_RS10260 (D5S13_01959) | 2073104..2074180 | - | 1077 | WP_000897640.1 | nitric oxide synthase oxygenase | - |
| D5S13_RS10265 (D5S13_01960) | 2074364..2075833 | + | 1470 | WP_000284433.1 | nicotinate phosphoribosyltransferase | - |
| D5S13_RS10270 (D5S13_01961) | 2075826..2076647 | + | 822 | WP_000040866.1 | ammonia-dependent NAD(+) synthetase | - |
| D5S13_RS10275 (D5S13_01962) | 2076918..2077520 | + | 603 | WP_000011542.1 | DUF2179 domain-containing protein | - |
| D5S13_RS10280 (D5S13_01963) | 2077501..2077674 | + | 174 | WP_000669864.1 | NETI motif-containing protein | - |
| D5S13_RS10285 (D5S13_01964) | 2077966..2078292 | - | 327 | WP_000434933.1 | staphostatin A | - |
| D5S13_RS10290 (D5S13_01965) | 2078323..2079489 | - | 1167 | WP_000827764.1 | hypothetical protein | VF |
| D5S13_RS10295 (D5S13_01966) | 2080350..2081645 | + | 1296 | WP_000572878.1 | adenylosuccinate lyase | - |
| D5S13_RS10300 (D5S13_01967) | 2081754..2082056 | + | 303 | WP_001165363.1 | YerC/YecD family TrpR-related protein | - |
| D5S13_RS10305 (D5S13_01968) | 2082228..2082920 | + | 693 | WP_000272070.1 | heptaprenylglyceryl phosphate synthase | - |
| D5S13_RS10310 (D5S13_01969) | 2082917..2085109 | + | 2193 | WP_000992924.1 | DNA helicase PcrA | - |
| D5S13_RS10315 (D5S13_01970) | 2085113..2087116 | + | 2004 | WP_000774559.1 | NAD-dependent DNA ligase LigA | - |
| D5S13_RS10320 (D5S13_01971) | 2087129..2088328 | + | 1200 | WP_000831695.1 | CamS family sex pheromone protein | - |
| D5S13_RS10325 (D5S13_01972) | 2088417..2089955 | - | 1539 | WP_000957020.1 | sodium/proline symporter PutP | - |
| D5S13_RS10330 (D5S13_01973) | 2090322..2090624 | + | 303 | WP_000170162.1 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC | - |
| D5S13_RS10335 (D5S13_01974) | 2090626..2092083 | + | 1458 | WP_000027917.1 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA | - |
| D5S13_RS10340 (D5S13_01975) | 2092096..2093523 | + | 1428 | WP_000545370.1 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB | - |
| D5S13_RS10345 | 2093563..2093709 | + | 147 | Protein_2027 | hypothetical protein | - |
| D5S13_RS10350 (D5S13_01976) | 2094235..2095182 | + | 948 | WP_001231451.1 | diacylglycerol kinase | - |
| D5S13_RS10355 (D5S13_01977) | 2095263..2096624 | + | 1362 | WP_001147870.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| D5S13_RS10360 (D5S13_01978) | 2096794..2097324 | + | 531 | WP_000548781.1 | DUF3267 domain-containing protein | - |
| D5S13_RS10365 (D5S13_01979) | 2097571..2098641 | + | 1071 | WP_000140176.1 | DNA polymerase IV | - |
| D5S13_RS10370 (D5S13_01980) | 2098708..2099262 | - | 555 | WP_000613738.1 | 3'-5' exonuclease | - |
| D5S13_RS10375 | 2099478..2099570 | + | 93 | WP_001790679.1 | hypothetical protein | - |
| D5S13_RS10380 (D5S13_01981) | 2099652..2100152 | - | 501 | WP_000949467.1 | H-type ferritin FtnA | - |
| D5S13_RS10385 (D5S13_01982) | 2100444..2101757 | + | 1314 | WP_001250329.1 | lipid II isoglutaminyl synthase subunit MurT | - |
| D5S13_RS10390 (D5S13_01983) | 2101759..2102490 | + | 732 | WP_000544966.1 | type 1 glutamine amidotransferase | - |
| D5S13_RS10395 | 2102576..2102687 | + | 112 | Protein_2037 | hypothetical protein | - |
| D5S13_RS10400 (D5S13_01984) | 2102677..2103081 | + | 405 | WP_263258450.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|