MGE detailed information
MGE type: Prophage MGE length: 66360 bp
Accession: NZ_CP032811 Location: 2612022..2678381 Organism: Escherichia coli strain ERL03-1416 Replicon: chromosome
Accession: NZ_CP032811 Location: 2612022..2678381 Organism: Escherichia coli strain ERL03-1416 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D8Z67_RS13415 () | 2607922..2609142 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| D8Z67_RS13420 () | 2609267..2609962 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| D8Z67_RS13425 () | 2609915..2611207 | - | 1293 | WP_071525082.1 | voltage-gated ClC-type chloride channel ClcB | - |
| D8Z67_RS13430 () | 2611365..2611979 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| D8Z67_RS13435 () | 2612022..2612876 | - | 855 | WP_000526515.1 | dimethyl sulfoxide reductase anchor subunit | - |
| D8Z67_RS13440 () | 2612878..2613495 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| D8Z67_RS13445 () | 2613506..2615929 | - | 2424 | WP_001414236.1 | dimethyl sulfoxide reductase subunit A | - |
| D8Z67_RS13450 () | 2615990..2618416 | - | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| D8Z67_RS13455 () | 2618615..2618920 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| D8Z67_RS13460 () | 2619028..2619738 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| D8Z67_RS13465 () | 2619741..2620301 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| D8Z67_RS13470 () | 2620336..2620677 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| D8Z67_RS13475 () | 2620812..2621138 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| D8Z67_RS13485 () | 2621908..2622092 | - | 185 | Protein_2588 | DUF3596 domain-containing protein | - |
| D8Z67_RS13490 () | 2622127..2622378 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| D8Z67_RS13495 () | 2622451..2623845 | - | 1395 | Protein_2590 | 3'-5' exoribonuclease | - |
| D8Z67_RS13505 () | 2625150..2626235 | - | 1086 | Protein_2592 | exonuclease | - |
| D8Z67_RS13510 () | 2626328..2626519 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| D8Z67_RS13515 () | 2626516..2626704 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| D8Z67_RS13525 () | 2627273..2627491 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| D8Z67_RS13530 () | 2627563..2627862 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| D8Z67_RS13535 () | 2628214..2628492 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D8Z67_RS13540 () | 2628494..2628685 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| D8Z67_RS13545 () | 2628706..2629077 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| D8Z67_RS13550 () | 2629175..2629477 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| D8Z67_RS13555 () | 2629474..2629899 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| D8Z67_RS13560 () | 2629922..2630884 | + | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| D8Z67_RS13565 () | 2630891..2631631 | + | 741 | WP_000788938.1 | ATP-binding protein | - |
| D8Z67_RS13570 () | 2631657..2632426 | + | 770 | Protein_2604 | DUF1627 domain-containing protein | - |
| D8Z67_RS13575 () | 2632442..2632837 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| D8Z67_RS13580 () | 2632894..2633478 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| D8Z67_RS13585 () | 2633594..2633698 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| D8Z67_RS13590 () | 2633944..2634099 | + | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| D8Z67_RS13595 () | 2634267..2634545 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| D8Z67_RS13600 () | 2634547..2635596 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| D8Z67_RS13605 () | 2635609..2635968 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| D8Z67_RS13610 () | 2635965..2636654 | + | 690 | WP_001059381.1 | antiterminator | - |
| D8Z67_RS13635 () | 2637291..2637719 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| D8Z67_RS13640 () | 2637716..2637971 | + | 256 | Protein_2614 | DUF3927 family protein | - |
| D8Z67_RS13645 () | 2638198..2639889 | + | 1692 | Protein_2615 | DUF1737 domain-containing protein | - |
| D8Z67_RS28425 () | 2641218..2641361 | + | 144 | WP_021498537.1 | hypothetical protein | - |
| D8Z67_RS13660 () | 2641800..2642015 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| D8Z67_RS13665 () | 2642020..2642364 | + | 345 | WP_000731241.1 | YdfR family protein | - |
| D8Z67_RS13670 () | 2642415..2642948 | + | 534 | WP_000992137.1 | lysozyme | - |
| D8Z67_RS13675 () | 2643219..2643788 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| D8Z67_RS13680 () | 2643788..2643934 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| D8Z67_RS13690 () | 2644162..2644347 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| D8Z67_RS13695 () | 2644772..2644999 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| D8Z67_RS13700 () | 2645041..2645406 | + | 366 | WP_000279786.1 | HNH endonuclease | - |
| D8Z67_RS13710 () | 2645696..2646259 | + | 564 | WP_000958392.1 | terminase small subunit | - |
| D8Z67_RS13715 () | 2646256..2647917 | + | 1662 | WP_001303179.1 | terminase large subunit | - |
| D8Z67_RS13720 () | 2647981..2649918 | + | 1938 | WP_151542909.1 | phage major capsid protein | - |
| D8Z67_RS13725 () | 2649963..2650184 | + | 222 | WP_001063023.1 | hypothetical protein | - |
| D8Z67_RS13730 () | 2650130..2652228 | + | 2099 | Protein_2630 | phage portal protein | - |
| D8Z67_RS13735 () | 2652225..2652551 | + | 327 | WP_000125988.1 | head-tail connector protein | - |
| D8Z67_RS13740 () | 2652561..2652911 | + | 351 | WP_001007901.1 | phage head closure protein | - |
| D8Z67_RS13745 () | 2652908..2653354 | + | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| D8Z67_RS13750 () | 2653351..2653695 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| D8Z67_RS13755 () | 2653754..2654470 | + | 717 | WP_001275508.1 | tail protein | - |
| D8Z67_RS13760 () | 2654476..2654850 | + | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| D8Z67_RS13765 () | 2654946..2655155 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| D8Z67_RS13770 () | 2655207..2658449 | + | 3243 | WP_000212925.1 | phage tail tape measure protein | - |
| D8Z67_RS13775 () | 2658442..2658783 | + | 342 | WP_000807954.1 | phage tail protein | - |
| D8Z67_RS13780 () | 2658783..2659481 | + | 699 | WP_001179510.1 | phage minor tail protein L | - |
| D8Z67_RS13785 () | 2659492..2660235 | + | 744 | WP_000194720.1 | C40 family peptidase | - |
| D8Z67_RS13790 () | 2660181..2660813 | + | 633 | WP_050439450.1 | tail assembly protein | - |
| D8Z67_RS13795 () | 2661156..2662363 | + | 1208 | Protein_2643 | phage tail protein | - |
| D8Z67_RS13805 () | 2662666..2665233 | + | 2568 | Protein_2644 | host specificity protein J | - |
| D8Z67_RS13810 () | 2665301..2665900 | + | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| D8Z67_RS13815 () | 2665965..2667278 | + | 1314 | WP_151567873.1 | ISNCY family transposase KIS | Transposase |
| D8Z67_RS13820 () | 2667280..2667549 | + | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| D8Z67_RS13825 () | 2667663..2668238 | + | 576 | WP_001131658.1 | hypothetical protein | VF |
| D8Z67_RS13830 () | 2668311..2668940 | + | 630 | WP_001356599.1 | hypothetical protein | VF |
| D8Z67_RS13835 () | 2669022..2669663 | + | 642 | WP_001143804.1 | hypothetical protein | VF |
| D8Z67_RS13845 () | 2669825..2670067 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| D8Z67_RS13850 () | 2670199..2671482 | + | 1284 | Protein_2652 | MHS family MFS transporter YdfJ | - |
| D8Z67_RS13855 () | 2671571..2673031 | + | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| D8Z67_RS13860 () | 2673067..2673270 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| D8Z67_RS13865 () | 2673447..2674133 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| D8Z67_RS13870 () | 2674222..2674968 | - | 747 | WP_000636568.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| D8Z67_RS13875 () | 2675105..2677150 | + | 2046 | WP_001302117.1 | peptidyl-dipeptidase Dcp | - |
| D8Z67_RS13880 () | 2677195..2677713 | - | 519 | WP_001024796.1 | 2-oxo-tetronate isomerase | - |
| D8Z67_RS13885 () | 2677989..2678381 | + | 393 | WP_000671724.1 | YdeI family stress tolerance OB fold protein | - |
| D8Z67_RS13890 () | 2678636..2679526 | + | 891 | WP_000592852.1 | diguanylate cyclase DgcZ | - |
| D8Z67_RS28655 () | 2679641..2679745 | - | 105 | WP_211180496.1 | protein MgtT | - |
| D8Z67_RS13895 () | 2679745..2679840 | - | 96 | WP_000901365.1 | protein MgtS | - |
| D8Z67_RS13900 () | 2679948..2680919 | - | 972 | WP_001310251.1 | transcriptional regulator FtrA | - |
| D8Z67_RS13905 () | 2681014..2681409 | + | 396 | WP_001271101.1 | rhodanese | - |
| D8Z67_RS13910 () | 2681450..2682637 | - | 1188 | WP_001054199.1 | efflux MFS transporter YdeE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|