MGE detailed information
MGE type: Prophage MGE length: 81559 bp
Accession: NZ_CP032811 Location: 2275459..2357017 Organism: Escherichia coli strain ERL03-1416 Replicon: chromosome
Accession: NZ_CP032811 Location: 2275459..2357017 Organism: Escherichia coli strain ERL03-1416 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D8Z67_RS11615 () | 2270626..2271366 | + | 741 | WP_000907234.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| D8Z67_RS11620 () | 2271401..2271922 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| D8Z67_RS11625 () | 2271924..2272526 | - | 603 | WP_001024949.1 | YebB family permuted papain-like enzyme | - |
| D8Z67_RS11630 () | 2272597..2272662 | + | 66 | WP_010723105.1 | stress response small protein YobI | - |
| D8Z67_RS11635 () | 2272801..2273412 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| D8Z67_RS11640 () | 2273421..2274431 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| D8Z67_RS11645 () | 2274677..2275462 | - | 786 | WP_000571476.1 | zinc ABC transporter permease subunit ZnuB | - |
| D8Z67_RS11650 () | 2275459..2276214 | - | 756 | WP_000202996.1 | Zinc import ATP-binding protein ZnuC | VF |
| D8Z67_RS11655 () | 2276293..2277225 | + | 933 | WP_001303192.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| D8Z67_RS11660 () | 2277241..2278563 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| D8Z67_RS11665 () | 2278683..2279654 | + | 972 | WP_000448391.1 | Lipid A biosynthesis myristoyltransferase | VF |
| D8Z67_RS11670 () | 2279785..2281227 | - | 1443 | WP_000091169.1 | pyruvate kinase | - |
| D8Z67_RS11675 () | 2281355..2282224 | - | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| D8Z67_RS11680 () | 2282562..2284037 | + | 1476 | WP_000301737.1 | glucose-6-phosphate dehydrogenase | - |
| D8Z67_RS11685 () | 2284272..2286083 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| D8Z67_RS11690 () | 2286120..2286761 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| D8Z67_RS11695 () | 2286817..2287995 | - | 1179 | WP_000173471.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| D8Z67_RS11700 () | 2288129..2288419 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| D8Z67_RS11705 () | 2288486..2288842 | + | 357 | WP_001295500.1 | protein YebF | - |
| D8Z67_RS11710 () | 2289169..2289828 | + | 660 | WP_000024742.1 | tellurite resistance TerB family protein | - |
| D8Z67_RS11715 () | 2290037..2292097 | + | 2061 | WP_151542861.1 | oligopeptidase B | - |
| D8Z67_RS11720 () | 2292094..2292756 | - | 663 | WP_000944244.1 | exodeoxyribonuclease X | - |
| D8Z67_RS11725 () | 2292780..2293436 | - | 657 | WP_000011656.1 | carbon-nitrogen hydrolase family protein | - |
| D8Z67_RS11730 () | 2293538..2293768 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| D8Z67_RS11735 () | 2293907..2294281 | + | 375 | WP_000168751.1 | CopC domain-containing protein YobA | - |
| D8Z67_RS11740 () | 2294285..2295157 | + | 873 | WP_000879314.1 | copper homeostasis membrane protein CopD | - |
| D8Z67_RS11745 () | 2295170..2295511 | + | 342 | WP_000976483.1 | YebY family protein | - |
| D8Z67_RS11750 () | 2295904..2296980 | - | 1077 | WP_045893699.1 | hypothetical protein ; Integrase | Integrase |
| D8Z67_RS11755 () | 2296946..2297227 | - | 282 | WP_001311878.1 | excisionase | - |
| D8Z67_RS11760 () | 2297334..2297522 | - | 189 | WP_001356607.1 | DUF1187 family protein | - |
| - () | 2297338..2297516 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2297338..2297516 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2297338..2297516 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2297338..2297516 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| D8Z67_RS11765 () | 2297515..2297709 | - | 195 | WP_042853000.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| D8Z67_RS11770 () | 2297766..2298575 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| D8Z67_RS11775 () | 2298568..2301237 | - | 2670 | WP_000102194.1 | exodeoxyribonuclease VIII | - |
| D8Z67_RS11780 () | 2301318..2301494 | - | 177 | WP_000245534.1 | hypothetical protein | - |
| D8Z67_RS11785 () | 2301488..2301709 | - | 222 | WP_000560228.1 | killing protein KilR | - |
| D8Z67_RS11790 () | 2301756..2302607 | - | 852 | WP_062882198.1 | Rha family phage regulatory protein | - |
| D8Z67_RS11795 () | 2303022..2303174 | - | 153 | WP_001169149.1 | DUF1391 family protein | - |
| D8Z67_RS11805 () | 2303555..2304019 | - | 465 | WP_001253182.1 | helix-turn-helix domain-containing protein | - |
| D8Z67_RS11810 () | 2304124..2304399 | + | 276 | WP_062881721.1 | helix-turn-helix domain-containing protein | - |
| D8Z67_RS11815 () | 2304383..2304805 | + | 423 | WP_000702023.1 | hypothetical protein | - |
| D8Z67_RS11820 () | 2304818..2305675 | + | 858 | WP_000899743.1 | DUF1376 domain-containing protein | - |
| D8Z67_RS11825 () | 2305682..2306428 | + | 747 | WP_062881720.1 | ATP-binding protein | - |
| D8Z67_RS11830 () | 2306450..2307211 | + | 762 | WP_151542863.1 | DUF1627 domain-containing protein | - |
| D8Z67_RS11835 () | 2307228..2307650 | + | 423 | WP_151542866.1 | DUF977 family protein | - |
| D8Z67_RS11840 () | 2307756..2307968 | + | 213 | WP_000072553.1 | hypothetical protein | - |
| D8Z67_RS11845 () | 2308054..2308218 | + | 165 | WP_100004899.1 | DUF4014 family protein | - |
| D8Z67_RS11850 () | 2308220..2308483 | + | 264 | WP_151542868.1 | hypothetical protein | - |
| D8Z67_RS11855 () | 2308494..2309363 | + | 870 | WP_000207986.1 | DUF551 domain-containing protein | - |
| D8Z67_RS11860 () | 2309479..2309583 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| D8Z67_RS11865 () | 2309830..2309985 | + | 156 | WP_012578894.1 | type I toxin-antitoxin system toxin HokD | - |
| D8Z67_RS11870 () | 2310197..2310376 | + | 180 | WP_000119356.1 | hypothetical protein | - |
| D8Z67_RS11875 () | 2310395..2310880 | + | 486 | WP_000818166.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| D8Z67_RS28415 () | 2311109..2311282 | + | 174 | WP_000687447.1 | hypothetical protein | - |
| D8Z67_RS11880 () | 2311342..2311941 | + | 600 | WP_062882632.1 | DUF1367 family protein | - |
| D8Z67_RS11885 () | 2311941..2312231 | + | 291 | WP_000228018.1 | DUF1364 domain-containing protein | - |
| D8Z67_RS11890 () | 2312228..2312782 | + | 555 | WP_000640170.1 | DUF1133 family protein | - |
| D8Z67_RS11900 () | 2313053..2313610 | + | 558 | Protein_2278 | ORF6N domain-containing protein | - |
| D8Z67_RS11915 () | 2314324..2316270 | + | 1947 | WP_151542873.1 | DUF1737 domain-containing protein | - |
| D8Z67_RS11920 () | 2316407..2316586 | + | 180 | WP_000143464.1 | DUF1378 family protein | - |
| D8Z67_RS11925 () | 2316627..2316872 | + | 246 | WP_024246943.1 | DUF826 domain-containing protein | - |
| D8Z67_RS11930 () | 2316950..2317165 | + | 216 | WP_001072899.1 | class II holin family protein | - |
| D8Z67_RS11935 () | 2317169..2317810 | + | 642 | WP_001015166.1 | hypothetical protein | - |
| D8Z67_RS11940 () | 2317820..2318134 | - | 315 | WP_000282141.1 | hypothetical protein | - |
| D8Z67_RS11945 () | 2318263..2318796 | + | 534 | WP_109063312.1 | lysozyme | - |
| D8Z67_RS11950 () | 2319315..2319500 | + | 186 | WP_001208683.1 | Rz1 family lipoprotein | - |
| D8Z67_RS11955 () | 2319976..2320452 | + | 477 | WP_000373407.1 | DUF1441 family protein | - |
| D8Z67_RS11960 () | 2320449..2321456 | + | 1008 | WP_001077621.1 | phage terminase large subunit family protein | - |
| D8Z67_RS11965 () | 2321618..2322856 | + | 1239 | WP_151542875.1 | Prophage integrase IntA ; Integrase | Integrase |
| D8Z67_RS11970 () | 2322869..2323072 | + | 204 | WP_001095275.1 | hypothetical protein | - |
| D8Z67_RS11975 () | 2323131..2323712 | + | 582 | WP_151542877.1 | antirepressor protein | - |
| D8Z67_RS11980 () | 2323885..2324403 | + | 519 | WP_192795843.1 | host cell division inhibitor Icd-like protein | - |
| D8Z67_RS11985 () | 2324407..2324772 | + | 366 | WP_000551742.1 | hypothetical protein | - |
| D8Z67_RS11990 () | 2324765..2324998 | + | 234 | WP_151542879.1 | hypothetical protein | - |
| D8Z67_RS11995 () | 2324991..2325190 | + | 200 | Protein_2295 | hypothetical protein | - |
| D8Z67_RS12000 () | 2325195..2325485 | + | 291 | WP_000728900.1 | DUF4222 domain-containing protein | - |
| D8Z67_RS12005 () | 2325482..2327236 | + | 1755 | WP_151542881.1 | DNA primase | - |
| D8Z67_RS12010 () | 2327584..2327835 | + | 252 | WP_151542883.1 | hypothetical protein | - |
| D8Z67_RS12015 () | 2327832..2328242 | + | 411 | WP_000126694.1 | single-stranded DNA-binding protein | - |
| D8Z67_RS12020 () | 2328703..2328897 | + | 195 | WP_001114742.1 | hypothetical protein | - |
| D8Z67_RS12025 () | 2328894..2330783 | + | 1890 | WP_000860403.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| D8Z67_RS12030 () | 2331038..2331319 | + | 282 | WP_000133409.1 | hypothetical protein | - |
| D8Z67_RS12035 () | 2331691..2332815 | + | 1125 | Protein_2303 | phage terminase large subunit family protein | - |
| D8Z67_RS12040 () | 2332812..2333024 | + | 213 | WP_000102414.1 | hypothetical protein | - |
| D8Z67_RS12045 () | 2333024..2334526 | + | 1503 | WP_000974564.1 | phage portal protein | - |
| D8Z67_RS12050 () | 2334471..2336495 | + | 2025 | WP_001114424.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| D8Z67_RS12055 () | 2336583..2336909 | + | 327 | WP_001097065.1 | DUF2190 family protein | - |
| D8Z67_RS12060 () | 2336902..2337183 | + | 282 | WP_001281350.1 | DNA breaking-rejoining protein | - |
| D8Z67_RS12065 () | 2337186..2337809 | + | 624 | WP_000974966.1 | phage tail protein | - |
| D8Z67_RS12070 () | 2337822..2338220 | + | 399 | WP_000682716.1 | tail protein | - |
| D8Z67_RS12075 () | 2338228..2338980 | + | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| D8Z67_RS12080 () | 2338994..2339416 | + | 423 | WP_000479043.1 | phage minor tail protein G | - |
| D8Z67_RS12085 () | 2339443..2339751 | + | 309 | WP_000438877.1 | phage tail assembly protein T | - |
| D8Z67_RS12090 () | 2339795..2342440 | + | 2646 | WP_000918269.1 | phage tail tape measure protein | - |
| D8Z67_RS12095 () | 2342437..2342766 | + | 330 | WP_000847298.1 | phage tail protein | - |
| D8Z67_RS12100 () | 2342766..2343464 | + | 699 | WP_001301816.1 | phage minor tail protein L | - |
| D8Z67_RS12105 () | 2343475..2344218 | + | 744 | WP_000194798.1 | C40 family peptidase | - |
| D8Z67_RS12110 () | 2344164..2344793 | + | 630 | WP_072147834.1 | tail assembly protein | - |
| D8Z67_RS12115 () | 2345034..2348510 | + | 3477 | WP_151542887.1 | host specificity protein J | - |
| D8Z67_RS12120 () | 2348578..2349177 | + | 600 | WP_001230428.1 | Outer membrane protein X | VF |
| D8Z67_RS12125 () | 2349242..2350555 | + | 1314 | WP_151545402.1 | ISNCY family transposase KIS | Transposase |
| D8Z67_RS12130 () | 2350557..2350826 | + | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| D8Z67_RS12135 () | 2351556..2352212 | + | 657 | WP_000812736.1 | protein-serine/threonine phosphatase | - |
| D8Z67_RS12140 () | 2352220..2352405 | - | 186 | WP_151542963.1 | YebW family protein | - |
| D8Z67_RS12145 () | 2352510..2352746 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| D8Z67_RS12150 () | 2352864..2354303 | - | 1440 | WP_001302304.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| D8Z67_RS12155 () | 2354384..2357017 | - | 2634 | WP_001302055.1 | hypothetical protein | VF |
| D8Z67_RS12160 () | 2356986..2358269 | - | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| D8Z67_RS12165 () | 2358399..2358896 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| D8Z67_RS12170 () | 2358993..2359691 | + | 699 | WP_000431368.1 | RNA chaperone ProQ | - |
| D8Z67_RS12175 () | 2359711..2361759 | + | 2049 | WP_001055778.1 | carboxy terminal-processing peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|