MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 90995 bp
Accession: NZ_CP032802 Location: 1..90995 Organism: Escherichia coli strain ERL06-2442 Replicon: plasmid pERL06-2442
Accession: NZ_CP032802 Location: 1..90995 Organism: Escherichia coli strain ERL06-2442 Replicon: plasmid pERL06-2442
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D8Z71_RS28065 () | 13..870 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| D8Z71_RS28080 () | 1782..2066 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| D8Z71_RS28085 () | 2066..2341 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D8Z71_RS28090 () | 2436..2642 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| D8Z71_RS28095 () | 2742..2957 | - | 216 | Protein_5 | transposase | - |
| D8Z71_RS28100 () | 3001..3567 | - | 567 | Protein_6 | IS3-like element IS600 family transposase | - |
| D8Z71_RS28105 () | 3567..3983 | - | 417 | Protein_7 | IS91 family transposase | - |
| D8Z71_RS28110 () | 3983..4168 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| D8Z71_RS28115 () | 4345..6555 | + | 2211 | WP_000592771.1 | catalase/peroxidase KatP | - |
| D8Z71_RS28120 () | 6599..6988 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| D8Z71_RS28125 () | 7045..8033 | + | 989 | Protein_11 | IS3 family transposase | - |
| D8Z71_RS28135 () | 8214..12116 | + | 3903 | WP_001034100.1 | serine protease autotransporter EspP | - |
| D8Z71_RS28140 () | 12372..12853 | - | 482 | Protein_13 | IS1 family transposase | - |
| D8Z71_RS28150 () | 14295..15116 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| D8Z71_RS28155 () | 15116..16222 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| D8Z71_RS28160 () | 16312..18033 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| D8Z71_RS28165 () | 18107..19105 | + | 999 | WP_001302181.1 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| D8Z71_RS28170 () | 19158..19346 | + | 189 | Protein_18 | hypothetical protein | - |
| D8Z71_RS28175 () | 19473..19853 | + | 381 | WP_001171554.1 | IS66 family insertion sequence hypothetical protein | - |
| D8Z71_RS28180 () | 19850..20197 | + | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| D8Z71_RS28185 () | 20247..21785 | + | 1539 | WP_000998048.1 | IS66-like element ISEc8 family transposase | - |
| D8Z71_RS28830 () | 21900..21986 | - | 87 | Protein_22 | transposase | - |
| D8Z71_RS28200 () | 22449..25145 | + | 2697 | WP_001358886.1 | metalloprotease StcE | - |
| D8Z71_RS28205 () | 25232..26107 | + | 876 | WP_001302175.1 | type II secretion system protein GspC | - |
| D8Z71_RS28210 () | 26108..28075 | + | 1968 | WP_001302177.1 | variant type II secretion system secretin EtpD | - |
| D8Z71_RS28215 () | 28075..29580 | + | 1506 | WP_000092338.1 | type II secretion system ATPase GspE | - |
| D8Z71_RS28220 () | 29582..30805 | + | 1224 | WP_001173152.1 | type II secretion system inner membrane protein GspF | - |
| D8Z71_RS28225 () | 30836..31270 | + | 435 | WP_001231211.1 | type II secretion system major pseudopilin GspG | - |
| D8Z71_RS28230 () | 31267..31821 | + | 555 | WP_000082929.1 | type II secretion system minor pseudopilin GspH | - |
| D8Z71_RS28235 () | 31836..32183 | + | 348 | WP_000173396.1 | type II secretion system minor pseudopilin GspI | - |
| D8Z71_RS28240 () | 32180..32779 | + | 600 | WP_000082782.1 | type II secretion system minor pseudopilin GspJ | - |
| D8Z71_RS28245 () | 32776..33753 | + | 978 | WP_000776550.1 | type II secretion system minor pseudopilin GspK | - |
| D8Z71_RS28250 () | 33792..34964 | + | 1173 | WP_071525076.1 | type II secretion system protein GspL | - |
| D8Z71_RS28255 () | 34951..35463 | + | 513 | WP_001004187.1 | type II secretion system protein M | - |
| D8Z71_RS28260 () | 35521..36354 | + | 834 | WP_000096786.1 | A24 family peptidase | - |
| D8Z71_RS28265 () | 36446..36847 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| D8Z71_RS28270 () | 37026..38197 | + | 1172 | Protein_37 | IS3 family transposase | - |
| D8Z71_RS28280 () | 38738..39253 | + | 516 | WP_000839950.1 | enterohemolysin-activating lysine-acyltransferase EhxC | - |
| D8Z71_RS28285 () | 39255..42251 | + | 2997 | WP_000217733.1 | enterohemolysin EhxA | - |
| D8Z71_RS28290 () | 42301..44421 | + | 2121 | WP_000987091.1 | enterohemolysin T1SS ABC transporter permease/ATPase EhxB | - |
| D8Z71_RS28295 () | 44425..45864 | + | 1440 | WP_001213545.1 | enterohemolysin T1SS ABC transporter subunit EhxD | - |
| D8Z71_RS28835 () | 45985..46477 | + | 493 | Protein_42 | MarR family transcriptional regulator | - |
| D8Z71_RS28315 () | 46608..46838 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| D8Z71_RS28320 () | 46959..47699 | + | 741 | WP_001066920.1 | tyrosine-type recombinase/integrase | - |
| D8Z71_RS28325 () | 47984..48961 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| D8Z71_RS28335 () | 49369..49569 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| D8Z71_RS28340 () | 49566..50186 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| D8Z71_RS28345 () | 50183..50866 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| D8Z71_RS28350 () | 51325..51543 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| D8Z71_RS28355 () | 51545..51850 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| D8Z71_RS28360 () | 51851..52657 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| D8Z71_RS28365 () | 52773..53135 | + | 363 | Protein_52 | RepB family plasmid replication initiator protein | - |
| D8Z71_RS28370 () | 53723..54889 | + | 1167 | WP_000772446.1 | plasmid-partitioning protein SopA | - |
| D8Z71_RS28375 () | 54889..55860 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| D8Z71_RS28390 () | 56555..57457 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| D8Z71_RS28395 () | 57461..57766 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| D8Z71_RS28400 () | 57843..58526 | + | 684 | WP_000085945.1 | DNA methylase | - |
| D8Z71_RS28405 () | 58527..58748 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| D8Z71_RS28410 () | 58642..59196 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| D8Z71_RS28840 () | 59242..60018 | + | 777 | WP_001005037.1 | hypothetical protein | - |
| D8Z71_RS28425 () | 60559..60861 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| D8Z71_RS28430 () | 60908..61330 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| D8Z71_RS28435 () | 61327..61518 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| D8Z71_RS28845 () | 61488..61997 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| D8Z71_RS28450 () | 62514..62744 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| D8Z71_RS28455 () | 62796..64157 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| D8Z71_RS28460 () | 64204..64767 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| D8Z71_RS28465 () | 64853..65308 | - | 456 | WP_001358896.1 | hypothetical protein | - |
| D8Z71_RS28470 () | 65378..65584 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| D8Z71_RS28475 () | 65610..66062 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| D8Z71_RS28480 () | 66119..66352 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| D8Z71_RS28485 () | 66418..68376 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| D8Z71_RS28490 () | 68431..68865 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| D8Z71_RS28495 () | 68862..69623 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 69592..69790 | + | 199 | NuclAT_0 | - | - |
| - () | 69592..69790 | + | 199 | NuclAT_0 | - | - |
| - () | 69592..69790 | + | 199 | NuclAT_0 | - | - |
| - () | 69592..69790 | + | 199 | NuclAT_0 | - | - |
| D8Z71_RS28500 () | 69855..70013 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| D8Z71_RS28505 () | 70147..72168 | + | 2022 | Protein_76 | relaxase/mobilization nuclease domain-containing protein | - |
| D8Z71_RS28510 () | 72236..72667 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| D8Z71_RS28520 () | 73311..73660 | - | 350 | Protein_78 | IS3 family transposase | - |
| D8Z71_RS28525 () | 73754..74017 | + | 264 | Protein_79 | IS21 family transposase | - |
| D8Z71_RS28530 () | 74057..74177 | + | 121 | Protein_80 | ATP-binding protein | - |
| D8Z71_RS28535 () | 74174..74326 | + | 153 | Protein_81 | IS1 family transposase | - |
| D8Z71_RS28540 () | 74433..83942 | + | 9510 | WP_000581721.1 | toxin B | - |
| D8Z71_RS28545 () | 84016..84240 | + | 225 | Protein_83 | IS3 family transposase | - |
| D8Z71_RS28550 () | 84308..84478 | - | 171 | Protein_84 | ATP-binding protein | - |
| D8Z71_RS28555 () | 84485..84736 | - | 252 | Protein_85 | transposase | - |
| D8Z71_RS28560 () | 84793..86181 | + | 1389 | Protein_86 | conjugative transfer relaxase/helicase TraI | - |
| D8Z71_RS28565 () | 86201..86947 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| D8Z71_RS28570 () | 87006..87866 | + | 861 | WP_000704522.1 | alpha/beta hydrolase | - |
| D8Z71_RS28575 () | 87969..88529 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| D8Z71_RS28580 () | 88662..88874 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| D8Z71_RS28585 () | 89119..89580 | + | 462 | WP_001233856.1 | thermonuclease family protein | - |
| D8Z71_RS28590 () | 89626..89835 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| D8Z71_RS28595 () | 89873..90211 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| D8Z71_RS28600 () | 90451..90705 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|