MGE detailed information
MGE type: Genomic_island MGE length: 21239 bp
Accession: NZ_CP032797 Location: 4817477..4838715 Organism: Escherichia coli strain ERL06-2497 Replicon: chromosome
Accession: NZ_CP032797 Location: 4817477..4838715 Organism: Escherichia coli strain ERL06-2497 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D8Z72_RS24905 () | 4813203..4813745 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| D8Z72_RS24910 () | 4814038..4816188 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| D8Z72_RS24915 () | 4816238..4816441 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| D8Z72_RS24920 () | 4816452..4817408 | + | 957 | WP_001297640.1 | GTPase | - |
| D8Z72_RS24925 () | 4817477..4818835 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| D8Z72_RS24930 () | 4818844..4819128 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| D8Z72_RS24935 () | 4819406..4821838 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| D8Z72_RS24940 () | 4821905..4823374 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| D8Z72_RS24945 () | 4823374..4825128 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4825278..4825354 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4825278..4825354 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4825278..4825354 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4825278..4825354 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4825278..4825354 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4825278..4825354 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4825278..4825354 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4825278..4825354 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| D8Z72_RS24950 () | 4825349..4825690 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| D8Z72_RS24955 () | 4825737..4826900 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| D8Z72_RS29240 () | 4826948..4827828 | - | 881 | Protein_4755 | DUF262 domain-containing protein | - |
| D8Z72_RS24970 () | 4827925..4828089 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| D8Z72_RS24975 () | 4828266..4829678 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| D8Z72_RS29245 () | 4829921..4830121 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| D8Z72_RS24980 () | 4830126..4830878 | - | 753 | Protein_4759 | Recombination-promoting nuclease RpnD | VF |
| D8Z72_RS24985 () | 4831345..4832577 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| D8Z72_RS24990 () | 4832618..4833889 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| D8Z72_RS24995 () | 4834005..4835156 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| D8Z72_RS25000 () | 4835166..4835933 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| D8Z72_RS25005 () | 4835930..4836196 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| D8Z72_RS25010 () | 4836508..4838715 | + | 2208 | WP_000535072.1 | hypothetical protein | VF |
| D8Z72_RS25020 () | 4838981..4839823 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| D8Z72_RS25025 () | 4839891..4841069 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |