MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 103432 bp
Accession: NZ_CP032738 Location: 5061591..5165022 Organism: Serratia sp. 1D1416 Replicon: chromosome
Accession: NZ_CP032738 Location: 5061591..5165022 Organism: Serratia sp. 1D1416 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D7I37_RS24510 () | 5057991..5058911 | - | 921 | WP_129544516.1 | citrate (pro-3S)-lyase subunit beta | - |
| D7I37_RS24515 () | 5058895..5059203 | - | 309 | WP_061797545.1 | citrate lyase acyl carrier protein | - |
| D7I37_RS24520 () | 5059203..5060273 | - | 1071 | WP_129544517.1 | [citrate (pro-3S)-lyase] ligase | - |
| D7I37_RS24525 () | 5060585..5061271 | + | 687 | WP_095098355.1 | two-component response regulator DpiA | - |
| D7I37_RS24535 () | 5061837..5063246 | + | 1410 | WP_129544518.1 | Prophage integrase IntS ; Integrase | Integrase |
| D7I37_RS24540 () | 5063381..5065012 | - | 1632 | WP_129544519.1 | Na/Pi cotransporter family protein | - |
| D7I37_RS24545 () | 5065279..5066355 | - | 1077 | WP_129544520.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| D7I37_RS24550 () | 5066359..5067204 | - | 846 | WP_129544521.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| D7I37_RS24555 () | 5067201..5068088 | - | 888 | WP_129544522.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| D7I37_RS24560 () | 5068150..5069466 | - | 1317 | WP_129544523.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| D7I37_RS24565 () | 5069876..5070658 | + | 783 | WP_207205574.1 | DeoR family transcriptional regulator | - |
| D7I37_RS24570 () | 5070771..5071574 | + | 804 | WP_129544525.1 | phosphodiesterase | - |
| D7I37_RS24575 () | 5071564..5072409 | + | 846 | WP_129544813.1 | inositol monophosphatase | - |
| D7I37_RS24580 () | 5072402..5073463 | + | 1062 | WP_129544526.1 | aldose 1-epimerase family protein | - |
| D7I37_RS24585 () | 5074096..5075178 | + | 1083 | WP_207205542.1 | porin | - |
| D7I37_RS24590 () | 5075353..5076288 | + | 936 | WP_129544527.1 | aminoimidazole riboside kinase | - |
| D7I37_RS24595 () | 5076369..5077784 | + | 1416 | WP_129544528.1 | sucrose-6-phosphate hydrolase | - |
| D7I37_RS24600 () | 5078004..5078903 | + | 900 | WP_129544529.1 | LysR family transcriptional regulator | - |
| D7I37_RS24605 () | 5079371..5079583 | + | 213 | WP_129544530.1 | AlpA family phage regulatory protein | - |
| D7I37_RS24610 () | 5079598..5079888 | + | 291 | WP_129544531.1 | hypothetical protein | - |
| D7I37_RS24615 () | 5079881..5080141 | + | 261 | WP_129544532.1 | type II toxin-antitoxin system HicA family toxin | - |
| D7I37_RS24620 () | 5080134..5081831 | + | 1698 | WP_129544533.1 | ParB family protein | - |
| D7I37_RS24625 () | 5081845..5082405 | + | 561 | WP_129544534.1 | DUF2857 domain-containing protein | - |
| D7I37_RS24630 () | 5082296..5083549 | + | 1254 | WP_207205543.1 | hypothetical protein | - |
| D7I37_RS24635 () | 5083812..5084585 | + | 774 | WP_129544536.1 | TIGR03761 family integrating conjugative element protein | - |
| D7I37_RS24640 () | 5084582..5085097 | + | 516 | WP_129544537.1 | DUF3158 family protein | - |
| D7I37_RS24645 () | 5085094..5085489 | + | 396 | WP_129544538.1 | single-stranded DNA-binding protein | - |
| D7I37_RS24650 () | 5085880..5087847 | + | 1968 | WP_129544539.1 | DNA topoisomerase III | - |
| D7I37_RS24655 () | 5088768..5089325 | + | 558 | WP_129544540.1 | hypothetical protein | - |
| D7I37_RS24660 () | 5089438..5089716 | + | 279 | WP_129544541.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| D7I37_RS24665 () | 5089730..5090014 | + | 285 | WP_129544542.1 | HigA family addiction module antidote protein | - |
| D7I37_RS24670 () | 5090345..5091100 | + | 756 | WP_165283122.1 | ABC transporter substrate-binding protein | - |
| D7I37_RS24675 () | 5091320..5091595 | + | 276 | WP_129544816.1 | uridylate kinase | - |
| D7I37_RS24680 () | 5091886..5092698 | + | 813 | WP_129544543.1 | GTPase | - |
| D7I37_RS24690 () | 5093021..5093386 | + | 366 | WP_129544545.1 | DUF3085 domain-containing protein | - |
| D7I37_RS24695 () | 5093490..5093831 | + | 342 | WP_129544546.1 | hypothetical protein | - |
| D7I37_RS24700 () | 5094321..5094869 | + | 549 | WP_129544547.1 | DUF3577 domain-containing protein | - |
| D7I37_RS24705 () | 5094949..5095197 | + | 249 | Protein_4789 | DUF3275 family protein | - |
| D7I37_RS24710 () | 5095535..5096362 | + | 828 | WP_129544548.1 | DUF945 domain-containing protein | - |
| D7I37_RS24715 () | 5096673..5097068 | + | 396 | WP_129544549.1 | VOC family protein | - |
| D7I37_RS24720 () | 5097235..5097711 | - | 477 | WP_129544550.1 | hypothetical protein | - |
| D7I37_RS24725 () | 5097702..5098409 | - | 708 | WP_129544551.1 | hypothetical protein | - |
| D7I37_RS24730 () | 5098567..5099163 | + | 597 | WP_129544552.1 | hypothetical protein | VF |
| D7I37_RS24735 () | 5099160..5099474 | + | 315 | WP_129544553.1 | hypothetical protein | - |
| D7I37_RS24740 () | 5099495..5099812 | + | 318 | WP_129544554.1 | hypothetical protein | - |
| D7I37_RS24745 () | 5099858..5100550 | + | 693 | WP_129544817.1 | TIGR03759 family integrating conjugative element protein | - |
| D7I37_RS24750 () | 5100535..5101137 | + | 603 | WP_129544555.1 | hypothetical protein | VF |
| D7I37_RS24755 () | 5101134..5101661 | + | 528 | WP_129544556.1 | integrating conjugative element protein | - |
| D7I37_RS24760 () | 5101677..5103832 | + | 2156 | Protein_4800 | type IV conjugative transfer system coupling protein TraD | - |
| D7I37_RS24765 () | 5103829..5104578 | + | 750 | WP_129544557.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| D7I37_RS24770 () | 5105058..5105540 | - | 483 | WP_129544558.1 | Mov34/MPN/PAD-1 family protein | - |
| D7I37_RS24775 () | 5105482..5106864 | - | 1383 | WP_129544559.1 | ThiF family adenylyltransferase | - |
| D7I37_RS24780 () | 5106828..5107283 | - | 456 | WP_129544560.1 | hypothetical protein | - |
| D7I37_RS24785 () | 5107280..5108425 | - | 1146 | WP_129544561.1 | hypothetical protein | - |
| D7I37_RS24790 () | 5108431..5109936 | - | 1506 | WP_129544562.1 | SAVED domain-containing protein | - |
| D7I37_RS24795 () | 5110305..5112524 | + | 2220 | WP_129544563.1 | FhuE receptor | VF |
| D7I37_RS24800 () | 5112733..5113740 | - | 1008 | WP_129544564.1 | DUF4238 domain-containing protein | - |
| D7I37_RS24805 () | 5113776..5114774 | - | 999 | WP_129544565.1 | DUF4238 domain-containing protein | - |
| D7I37_RS27195 () | 5114884..5115081 | - | 198 | WP_207205544.1 | hypothetical protein | - |
| D7I37_RS24815 () | 5115264..5115626 | + | 363 | WP_129544566.1 | raqprd family integrative conjugative element protein | - |
| D7I37_RS24820 () | 5115623..5115856 | + | 234 | WP_129544567.1 | TIGR03758 family integrating conjugative element protein | - |
| D7I37_RS24825 () | 5115871..5116233 | + | 363 | WP_129544568.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| D7I37_RS24830 () | 5116246..5116665 | + | 420 | WP_207205575.1 | TIGR03750 family conjugal transfer protein | - |
| D7I37_RS24835 () | 5116662..5117342 | + | 681 | WP_129544570.1 | TIGR03746 family integrating conjugative element protein | - |
| D7I37_RS24840 () | 5117339..5118235 | + | 897 | WP_129544571.1 | TIGR03749 family integrating conjugative element protein | - |
| D7I37_RS24845 () | 5118225..5119657 | + | 1433 | Protein_4817 | TIGR03752 family integrating conjugative element protein | - |
| D7I37_RS24850 () | 5119638..5120081 | + | 444 | WP_129544572.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| D7I37_RS24855 () | 5120081..5122948 | + | 2868 | WP_129544573.1 | hypothetical protein | VF |
| D7I37_RS24860 () | 5122959..5123705 | + | 747 | WP_165283123.1 | thioredoxin domain-containing protein | - |
| D7I37_RS24865 () | 5123903..5124406 | + | 504 | WP_129544574.1 | DNA repair protein RadC | - |
| D7I37_RS24870 () | 5124490..5124873 | - | 384 | WP_129544575.1 | YkgJ family cysteine cluster protein | - |
| D7I37_RS24875 () | 5125452..5125826 | + | 375 | WP_129544819.1 | TIGR03757 family integrating conjugative element protein | - |
| D7I37_RS24880 () | 5125823..5126770 | + | 948 | WP_129544576.1 | TIGR03756 family integrating conjugative element protein | - |
| D7I37_RS24885 () | 5126778..5128169 | + | 1392 | WP_129544577.1 | integrating conjugative element protein | - |
| D7I37_RS24890 () | 5128166..5128525 | + | 360 | WP_129544578.1 | hypothetical protein | - |
| D7I37_RS24895 () | 5128536..5130053 | + | 1518 | WP_129544579.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| D7I37_RS24900 () | 5130067..5130438 | - | 372 | WP_129544580.1 | DUF3742 family protein | - |
| D7I37_RS24905 () | 5130468..5130884 | - | 417 | WP_129544820.1 | PIN domain-containing protein | Toxin Detail |
| D7I37_RS24910 () | 5130871..5131104 | - | 234 | WP_129544581.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| D7I37_RS24915 () | 5131224..5131834 | - | 611 | Protein_4831 | RES family NAD+ phosphorylase | - |
| D7I37_RS24920 () | 5131850..5132476 | - | 627 | WP_129544582.1 | integrase | - |
| D7I37_RS24925 () | 5132812..5134650 | + | 1839 | WP_129544583.1 | TraI domain-containing protein | - |
| D7I37_RS27200 () | 5134730..5134867 | - | 138 | WP_207205545.1 | glutaminase | - |
| D7I37_RS24935 () | 5135340..5135735 | - | 396 | WP_129544584.1 | hypothetical protein | - |
| D7I37_RS24940 () | 5135835..5136284 | - | 450 | WP_129544585.1 | hypothetical protein | - |
| D7I37_RS24945 () | 5136942..5138978 | + | 2037 | WP_129544586.1 | hydantoinase/oxoprolinase family protein | - |
| D7I37_RS24950 () | 5138982..5140973 | + | 1992 | WP_129544587.1 | hydantoinase B/oxoprolinase family protein | - |
| D7I37_RS24955 () | 5141082..5142068 | - | 987 | WP_207205546.1 | Hca operon transcriptional activator HcaR | VF |
| D7I37_RS24960 () | 5142223..5142948 | - | 726 | WP_129544588.1 | ABC transporter permease | - |
| D7I37_RS24965 () | 5142948..5143658 | - | 711 | WP_129544589.1 | ABC transporter permease | - |
| D7I37_RS24970 () | 5143741..5144592 | - | 852 | WP_129544590.1 | Nopaline-binding periplasmic protein | VF |
| D7I37_RS24975 () | 5144658..5145431 | - | 774 | WP_129544591.1 | Octopine permease ATP-binding protein P | VF |
| D7I37_RS24980 () | 5145637..5147040 | - | 1404 | WP_129544592.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| D7I37_RS24985 () | 5147037..5147333 | - | 297 | WP_129544593.1 | (2Fe-2S)-binding protein | - |
| D7I37_RS24990 () | 5147314..5148459 | - | 1146 | WP_165283142.1 | FAD-binding oxidoreductase | - |
| D7I37_RS24995 () | 5148834..5149757 | + | 924 | WP_207205547.1 | LysR family transcriptional regulator | - |
| D7I37_RS25000 () | 5150553..5151767 | + | 1215 | WP_129544594.1 | aspartate aminotransferase family protein | - |
| D7I37_RS25005 () | 5151783..5152811 | + | 1029 | WP_129544595.1 | arginine N-succinyltransferase | - |
| D7I37_RS25010 () | 5152811..5154286 | + | 1476 | WP_129544596.1 | succinylglutamate-semialdehyde dehydrogenase | - |
| D7I37_RS25015 () | 5154298..5155638 | + | 1341 | WP_129544597.1 | N-succinylarginine dihydrolase | - |
| D7I37_RS25020 () | 5155651..5156676 | + | 1026 | WP_129544598.1 | succinylglutamate desuccinylase | - |
| D7I37_RS25030 () | 5157256..5157648 | + | 393 | WP_207205548.1 | 3-keto-5-aminohexanoate cleavage protein | - |
| D7I37_RS25035 () | 5157707..5159131 | - | 1425 | WP_129544599.1 | UvrD-helicase domain-containing protein | - |
| D7I37_RS25040 () | 5159121..5160857 | - | 1737 | WP_129544600.1 | AAA family ATPase | - |
| D7I37_RS25045 () | 5161464..5161838 | - | 375 | WP_129544601.1 | hypothetical protein | - |
| D7I37_RS25050 () | 5162320..5162733 | - | 414 | WP_129544602.1 | hypothetical protein | - |
| D7I37_RS25055 () | 5162758..5163810 | - | 1053 | WP_129544603.1 | hypothetical protein | - |
| D7I37_RS25060 () | 5163951..5164214 | - | 264 | WP_129544604.1 | helix-turn-helix domain-containing protein | - |
| D7I37_RS25070 () | 5165726..5166574 | - | 849 | WP_129544605.1 | AraC family transcriptional regulator | - |
| D7I37_RS25075 () | 5166796..5168628 | + | 1833 | WP_129544606.1 | DUF2264 domain-containing protein | - |
| D7I37_RS25080 () | 5168665..5169941 | + | 1277 | Protein_4862 | oligosaccharide MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|