MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 117572 bp
Accession: NZ_CP032684 Location: 3576251..3693822 Organism: Rhizobium sp. CCGE531 Replicon: chromosome
Accession: NZ_CP032684 Location: 3576251..3693822 Organism: Rhizobium sp. CCGE531 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCGE531_RS17420 () | 3571779..3575963 | + | 4185 | WP_120665506.1 | translocation/assembly module TamB | - |
| CCGE531_RS17425 () | 3576187..3577122 | + | 936 | WP_120665509.1 | arginase | - |
| CCGE531_RS17430 () | 3577481..3577957 | + | 477 | WP_120665511.1 | Chemotaxis protein CheW | VF |
| CCGE531_RS17435 () | 3578073..3578252 | - | 180 | WP_120665513.1 | hypothetical protein | - |
| CCGE531_RS17440 () | 3578276..3578542 | - | 267 | WP_120665516.1 | formate dehydrogenase subunit delta | - |
| CCGE531_RS17445 () | 3578532..3579359 | - | 828 | WP_120665519.1 | formate dehydrogenase accessory sulfurtransferase FdhD | - |
| CCGE531_RS17450 () | 3579589..3582468 | - | 2880 | WP_120665522.1 | formate dehydrogenase subunit alpha | - |
| CCGE531_RS17455 () | 3582474..3584030 | - | 1557 | WP_120665525.1 | NADH-quinone oxidoreductase subunit NuoF | - |
| CCGE531_RS17460 () | 3584027..3584506 | - | 480 | WP_120665528.1 | formate dehydrogenase subunit gamma | - |
| CCGE531_RS17465 () | 3584667..3585563 | - | 897 | WP_120665531.1 | LysR family transcriptional regulator | - |
| CCGE531_RS17470 () | 3585634..3585972 | - | 339 | WP_120665534.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| CCGE531_RS17475 () | 3586076..3586846 | - | 771 | WP_120665537.1 | 3-alpha-hydroxycholanate dehydrogenase (NADP(+)) | VF |
| CCGE531_RS17480 () | 3586946..3587719 | + | 774 | WP_120665539.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| CCGE531_RS17485 () | 3587834..3589345 | + | 1512 | WP_120665542.1 | glycerol-3-phosphate dehydrogenase | - |
| CCGE531_RS17490 () | 3589355..3589819 | - | 465 | WP_120665545.1 | IS607 family transposase ISLhe9 | Transposase |
| CCGE531_RS17495 () | 3589894..3590469 | + | 576 | WP_120665548.1 | NAD(P)H-dependent oxidoreductase | - |
| CCGE531_RS17500 () | 3590641..3591852 | + | 1212 | WP_120665551.1 | acyltransferase | - |
| CCGE531_RS17505 () | 3592143..3593264 | - | 1122 | WP_120665554.1 | mandelate racemase/muconate lactonizing enzyme family protein | - |
| CCGE531_RS17510 () | 3593325..3594824 | - | 1500 | WP_120665557.1 | aldehyde dehydrogenase | - |
| CCGE531_RS17515 () | 3594826..3595971 | - | 1146 | WP_120665560.1 | iron-containing alcohol dehydrogenase | - |
| CCGE531_RS17520 () | 3596089..3596994 | + | 906 | WP_120665563.1 | Glycine cleavage system transcriptional activator | VF |
| CCGE531_RS17525 () | 3597415..3597822 | - | 408 | WP_069613408.1 | F0F1 ATP synthase subunit epsilon | - |
| CCGE531_RS17530 () | 3597900..3599330 | - | 1431 | WP_120665566.1 | ATP synthase subunit beta | VF |
| CCGE531_RS17535 () | 3599354..3600238 | - | 885 | WP_120665569.1 | F0F1 ATP synthase subunit gamma | - |
| CCGE531_RS17540 () | 3600268..3601797 | - | 1530 | WP_120665571.1 | ATP synthase subunit alpha | VF |
| CCGE531_RS17545 () | 3601797..3602363 | - | 567 | WP_120665574.1 | F0F1 ATP synthase subunit delta | - |
| CCGE531_RS17550 () | 3602626..3603009 | - | 384 | WP_120665577.1 | DUF4345 domain-containing protein | - |
| CCGE531_RS17555 () | 3603119..3605350 | - | 2232 | WP_120665580.1 | primosomal protein N' | - |
| CCGE531_RS17560 () | 3605704..3606276 | + | 573 | WP_162943921.1 | TetR/AcrR family transcriptional regulator | - |
| CCGE531_RS17565 () | 3606269..3606604 | + | 336 | WP_162943922.1 | nuclear transport factor 2 family protein | - |
| CCGE531_RS17570 () | 3606579..3606938 | + | 360 | WP_120665588.1 | TfoX/Sxy family protein | - |
| CCGE531_RS17575 () | 3607203..3607847 | + | 645 | WP_120665591.1 | glutathione S-transferase family protein | - |
| CCGE531_RS17580 () | 3607986..3609122 | - | 1137 | WP_120665593.1 | AAA family ATPase | - |
| CCGE531_RS17585 () | 3609148..3610092 | - | 945 | WP_120665594.1 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | - |
| CCGE531_RS17590 () | 3610336..3611271 | + | 936 | WP_120666921.1 | Tyrosine recombinase XerC | VF |
| CCGE531_RS17595 () | 3611402..3612493 | + | 1092 | WP_120665596.1 | TraB/GumN family protein | - |
| CCGE531_RS17600 () | 3612471..3612983 | - | 513 | WP_162943923.1 | DUF2867 domain-containing protein | - |
| CCGE531_RS17605 () | 3613187..3616048 | - | 2862 | WP_120665599.1 | insulinase family protein | - |
| CCGE531_RS17610 () | 3616162..3617568 | - | 1407 | WP_120665601.1 | Dihydrolipoyl dehydrogenase 3 | VF |
| CCGE531_RS17615 () | 3617597..3618235 | - | 639 | WP_120665604.1 | LysE family transporter | - |
| CCGE531_RS17620 () | 3618255..3619010 | - | 756 | WP_120665607.1 | putative oxidoreductase YgfF | VF |
| CCGE531_RS17625 () | 3619007..3619510 | - | 504 | WP_120666925.1 | hypothetical protein | - |
| CCGE531_RS17630 () | 3619531..3620280 | - | 750 | WP_120665610.1 | DUF4241 domain-containing protein | - |
| CCGE531_RS17635 () | 3620296..3621540 | - | 1245 | WP_120665613.1 | 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | - |
| CCGE531_RS17645 () | 3621786..3624770 | - | 2985 | WP_120665616.1 | 2-oxoglutarate dehydrogenase E1 component | - |
| CCGE531_RS17650 () | 3624945..3625847 | - | 903 | WP_120665619.1 | succinate--CoA ligase subunit alpha | - |
| CCGE531_RS17655 () | 3625860..3626351 | - | 492 | WP_120665622.1 | DUF1579 family protein | - |
| CCGE531_RS17660 () | 3626357..3627550 | - | 1194 | WP_120665625.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| CCGE531_RS17665 () | 3627578..3628540 | - | 963 | WP_007690171.1 | malate dehydrogenase | - |
| CCGE531_RS17670 () | 3628721..3629884 | - | 1164 | WP_120665627.1 | cell division protein ZapE | - |
| CCGE531_RS17675 () | 3629947..3630471 | - | 525 | WP_120665629.1 | protease inhibitor Inh/omp19 family protein | - |
| CCGE531_RS17680 () | 3630798..3631577 | - | 780 | WP_120665632.1 | succinate dehydrogenase iron-sulfur subunit | - |
| CCGE531_RS17685 () | 3631595..3633451 | - | 1857 | WP_120665635.1 | succinate dehydrogenase flavoprotein subunit | - |
| CCGE531_RS17690 () | 3633459..3633839 | - | 381 | WP_120665638.1 | succinate dehydrogenase, hydrophobic membrane anchor protein | - |
| CCGE531_RS17695 () | 3633905..3634303 | - | 399 | WP_120665640.1 | succinate dehydrogenase, cytochrome b556 subunit | - |
| CCGE531_RS17700 () | 3634606..3635004 | + | 399 | WP_120665643.1 | hypothetical protein | - |
| CCGE531_RS17705 () | 3635011..3635661 | - | 651 | WP_120665645.1 | methyltransferase | - |
| CCGE531_RS17710 () | 3635680..3636111 | - | 432 | WP_120665648.1 | EVE domain-containing protein | - |
| CCGE531_RS17715 () | 3636115..3636408 | - | 294 | WP_120665651.1 | YciI family protein | - |
| CCGE531_RS17720 () | 3636436..3637425 | - | 990 | WP_120665654.1 | NAD(P)-dependent glycerol-3-phosphate dehydrogenase | - |
| CCGE531_RS17725 () | 3637422..3638519 | - | 1098 | WP_120665657.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| CCGE531_RS17730 () | 3638604..3639533 | + | 930 | WP_120665660.1 | hydroxymethylbilane synthase | - |
| CCGE531_RS17735 () | 3639540..3640268 | + | 729 | WP_120665663.1 | uroporphyrinogen-III synthase | - |
| CCGE531_RS17740 () | 3640349..3641614 | + | 1266 | WP_120665666.1 | COG4223 family protein | - |
| CCGE531_RS17745 () | 3641630..3643237 | + | 1608 | WP_120665669.1 | heme biosynthesis protein HemY | - |
| CCGE531_RS17750 () | 3643352..3643837 | + | 486 | WP_120665671.1 | TerB family tellurite resistance protein | - |
| CCGE531_RS17755 () | 3643830..3644555 | + | 726 | WP_120665674.1 | glutamine amidotransferase | - |
| CCGE531_RS17760 () | 3644569..3645183 | - | 615 | WP_120665676.1 | poly-gamma-glutamate hydrolase family protein | - |
| CCGE531_RS17765 () | 3645192..3646448 | - | 1257 | WP_120665679.1 | MFS transporter | - |
| CCGE531_RS17770 () | 3646561..3646884 | + | 324 | WP_120665681.1 | YggT family protein | - |
| CCGE531_RS17775 () | 3646881..3647198 | + | 318 | WP_120665684.1 | DUF167 domain-containing protein | - |
| CCGE531_RS17780 () | 3647199..3647735 | - | 537 | WP_120665686.1 | inorganic diphosphatase | - |
| CCGE531_RS17785 () | 3647938..3648444 | - | 507 | WP_112341386.1 | GNAT family N-acetyltransferase | - |
| CCGE531_RS17790 () | 3648650..3650476 | - | 1827 | WP_120665689.1 | translational GTPase TypA | - |
| CCGE531_RS17795 () | 3650714..3651397 | - | 684 | WP_120665691.1 | glutathione S-transferase family protein | - |
| CCGE531_RS17800 () | 3651488..3651952 | + | 465 | WP_162943924.1 | hypothetical protein | VF |
| CCGE531_RS17805 () | 3652053..3654116 | - | 2064 | WP_120665696.1 | M3 family metallopeptidase | - |
| CCGE531_RS17810 () | 3654229..3654870 | - | 642 | WP_120665699.1 | LysE family translocator | - |
| CCGE531_RS17815 () | 3655032..3655514 | + | 483 | WP_120665702.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| CCGE531_RS17820 () | 3655590..3656813 | - | 1224 | WP_120666927.1 | argininosuccinate synthase | - |
| CCGE531_RS17825 () | 3656934..3657236 | - | 303 | WP_120665705.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CCGE531_RS17830 () | 3657226..3657468 | - | 243 | WP_120665708.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| CCGE531_RS17835 () | 3657553..3658407 | + | 855 | WP_120665711.1 | 3alpha-hydroxy bile acid-CoA-ester 3-dehydrogenase 1/3 | VF |
| CCGE531_RS17840 () | 3658476..3659117 | + | 642 | WP_120665714.1 | LysE family translocator | - |
| CCGE531_RS17845 () | 3659101..3659529 | - | 429 | WP_120665717.1 | hypothetical protein | - |
| CCGE531_RS17850 () | 3659535..3660770 | - | 1236 | WP_120666929.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | - |
| CCGE531_RS17855 () | 3661056..3661619 | - | 564 | WP_120665720.1 | hypothetical protein | - |
| CCGE531_RS17860 () | 3661952..3662341 | - | 390 | WP_120665723.1 | DUF1232 domain-containing protein | - |
| CCGE531_RS17865 () | 3662409..3662714 | - | 306 | WP_120665726.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| CCGE531_RS17870 () | 3662748..3663230 | + | 483 | WP_120665728.1 | Low molecular weight protein-tyrosine-phosphatase YfkJ | VF |
| CCGE531_RS17875 () | 3663161..3663757 | - | 597 | WP_120665731.1 | RNA 2',3'-cyclic phosphodiesterase | - |
| CCGE531_RS17880 () | 3663826..3664476 | - | 651 | WP_120665734.1 | arylesterase | - |
| CCGE531_RS17885 () | 3664557..3665267 | + | 711 | WP_120665736.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| CCGE531_RS17890 () | 3665264..3667810 | + | 2547 | WP_120665739.1 | ABC transporter permease | - |
| CCGE531_RS17895 () | 3668007..3668747 | + | 741 | WP_120665742.1 | Bax inhibitor-1/YccA family protein | - |
| CCGE531_RS17900 () | 3668866..3669423 | + | 558 | WP_120665745.1 | GNAT family N-acetyltransferase | - |
| CCGE531_RS17905 () | 3669684..3670085 | - | 402 | WP_120665748.1 | DUF2794 domain-containing protein | - |
| CCGE531_RS17910 () | 3670452..3671195 | - | 744 | WP_120665751.1 | thioredoxin family protein | - |
| CCGE531_RS17915 () | 3671454..3674144 | - | 2691 | WP_120665753.1 | aconitate hydratase AcnA | - |
| CCGE531_RS17920 () | 3674406..3675053 | + | 648 | WP_120665756.1 | Cytochrome c biogenesis ATP-binding export protein CcmA | VF |
| CCGE531_RS17925 () | 3675415..3676074 | + | 660 | WP_120665759.1 | Heme exporter protein B | VF |
| CCGE531_RS17930 () | 3676255..3677016 | + | 762 | WP_120665762.1 | Heme exporter protein C | VF |
| CCGE531_RS17935 () | 3677018..3677191 | + | 174 | WP_120665765.1 | heme exporter protein CcmD | - |
| CCGE531_RS17940 () | 3677188..3677799 | + | 612 | WP_120665768.1 | DsbE family thiol:disulfide interchange protein | - |
| CCGE531_RS17945 () | 3678054..3678917 | + | 864 | WP_120662595.1 | Tyrosine recombinase XerD | VF |
| CCGE531_RS17950 () | 3678923..3680110 | + | 1188 | WP_120662594.1 | IS91 family transposase ISAzo26 | Transposase |
| CCGE531_RS17955 () | 3680504..3681452 | + | 949 | WP_120662593.1 | IS630 family transposase ISRel6 | Transposase |
| CCGE531_RS17960 () | 3681586..3682176 | - | 591 | WP_120665771.1 | DUF2585 domain-containing protein | - |
| CCGE531_RS17965 () | 3682173..3682892 | - | 720 | WP_120665774.1 | septation protein A | - |
| CCGE531_RS17970 () | 3682889..3684358 | - | 1470 | WP_120665776.1 | Signal recognition particle receptor FtsY | VF |
| CCGE531_RS17975 () | 3684377..3685651 | - | 1275 | WP_120665779.1 | tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB | - |
| CCGE531_RS17980 () | 3685648..3686553 | - | 906 | WP_120665782.1 | diaminopimelate epimerase | - |
| CCGE531_RS17985 () | 3686663..3687262 | - | 600 | WP_120665784.1 | hypothetical protein | - |
| CCGE531_RS17990 () | 3687540..3687983 | + | 444 | WP_162943925.1 | SRPBCC family protein | - |
| CCGE531_RS17995 () | 3688054..3689073 | - | 1020 | WP_120665790.1 | MBL fold metallo-hydrolase | - |
| CCGE531_RS18000 () | 3689070..3690059 | - | 990 | WP_120665793.1 | hypothetical protein | - |
| CCGE531_RS18005 () | 3690432..3691997 | + | 1566 | WP_120665796.1 | Signal recognition particle protein | VF |
| CCGE531_RS18010 () | 3692016..3692318 | + | 303 | WP_015341476.1 | chorismate mutase | - |
| CCGE531_RS18015 () | 3692445..3692807 | + | 363 | WP_120665798.1 | 30S ribosomal protein S16 | - |
| CCGE531_RS18020 () | 3693030..3693611 | + | 582 | WP_120665801.1 | ribosome maturation factor RimM | - |
| CCGE531_RS18025 () | 3693636..3694328 | + | 693 | WP_120665804.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| CCGE531_RS18030 () | 3694481..3694900 | + | 420 | WP_120665806.1 | DUF1801 domain-containing protein | - |
| CCGE531_RS18035 () | 3695179..3695715 | + | 537 | WP_120665809.1 | 50S ribosomal protein L19 | - |
| CCGE531_RS18040 () | 3695927..3696724 | + | 798 | WP_120665812.1 | transporter substrate-binding domain-containing protein | - |
| CCGE531_RS18045 () | 3696759..3697637 | + | 879 | WP_120665815.1 | amino acid ABC transporter permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|