MGE detailed information
MGE type: IScluster/Tn MGE length: 5115 bp
Accession: NZ_CP032632 Location: 416..5530 Organism: Pseudomonas syringae pv. actinidiae str. Shaanxi_M228 Replicon: plasmid pM228
Accession: NZ_CP032632 Location: 416..5530 Organism: Pseudomonas syringae pv. actinidiae str. Shaanxi_M228 Replicon: plasmid pM228
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CN228_RS32385 () | 80..1149 | + | 1070 | Protein_0 | IS630 family transposase | - |
| CN228_RS32395 () | 1347..2309 | - | 963 | WP_017685121.1 | tyrosine-type recombinase/integrase | - |
| CN228_RS32400 () | 2650..2898 | + | 249 | WP_017685122.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CN228_RS32405 () | 2914..3264 | + | 351 | WP_017685123.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CN228_RS32410 () | 3396..3980 | - | 585 | Protein_4 | Oxygen regulatory protein NreC | VF |
| CN228_RS32420 () | 5687..5992 | + | 306 | WP_017706770.1 | type IV secretion system protein | - |
| CN228_RS32425 () | 5982..6791 | + | 810 | WP_017684942.1 | P-type conjugative transfer protein VirB9 | - |
| CN228_RS32430 () | 6778..8148 | + | 1371 | WP_017684943.1 | TrbI/VirB10 family protein | - |
| CN228_RS32435 () | 8158..9189 | + | 1032 | WP_017704948.1 | P-type DNA transfer ATPase VirB11 | - |
| CN228_RS32440 () | 9199..9555 | + | 357 | WP_017684945.1 | hypothetical protein | - |
| CN228_RS32445 () | 9804..10427 | + | 624 | WP_017684946.1 | glycoside hydrolase family 25 protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|