MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 72748 bp
Accession: NZ_CP032632 Location: 1..72748 Organism: Pseudomonas syringae pv. actinidiae str. Shaanxi_M228 Replicon: plasmid pM228
Accession: NZ_CP032632 Location: 1..72748 Organism: Pseudomonas syringae pv. actinidiae str. Shaanxi_M228 Replicon: plasmid pM228
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CN228_RS32385 () | 80..1149 | + | 1070 | Protein_0 | IS630 family transposase | - |
| CN228_RS32395 () | 1347..2309 | - | 963 | WP_017685121.1 | tyrosine-type recombinase/integrase | - |
| CN228_RS32400 () | 2650..2898 | + | 249 | WP_017685122.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CN228_RS32405 () | 2914..3264 | + | 351 | WP_017685123.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CN228_RS32410 () | 3396..3980 | - | 585 | Protein_4 | Oxygen regulatory protein NreC | VF |
| CN228_RS32420 () | 5687..5992 | + | 306 | WP_017706770.1 | hypothetical protein | VF |
| CN228_RS32425 () | 5982..6791 | + | 810 | WP_017684942.1 | P-type conjugative transfer protein VirB9 | - |
| CN228_RS32430 () | 6778..8148 | + | 1371 | WP_017684943.1 | Type IV secretion system protein virB10 | VF |
| CN228_RS32435 () | 8158..9189 | + | 1032 | WP_017704948.1 | Type IV secretion system protein VirB11 | VF |
| CN228_RS32440 () | 9199..9555 | + | 357 | WP_017684945.1 | hypothetical protein | - |
| CN228_RS32445 () | 9804..10427 | + | 624 | WP_017684946.1 | glycoside hydrolase family 25 protein | - |
| CN228_RS32450 () | 10979..11209 | + | 231 | WP_017684963.1 | hypothetical protein | - |
| CN228_RS32455 () | 11209..12861 | + | 1653 | WP_017684962.1 | type IV secretory system conjugative DNA transfer family protein | - |
| CN228_RS32460 () | 12902..13264 | + | 363 | WP_015060690.1 | IncN plasmid killer protein | - |
| CN228_RS32465 () | 13292..15190 | + | 1899 | WP_017684961.1 | DNA topoisomerase III | - |
| CN228_RS32470 () | 15213..18242 | - | 3030 | WP_017682807.1 | Tn3 family transposase ISPsy42 | Transposase |
| CN228_RS32475 () | 18271..18843 | - | 573 | WP_004666660.1 | Tn3 family transposase ISPsy42 | Transposase |
| CN228_RS32480 () | 19023..19274 | + | 252 | WP_003108276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| CN228_RS32485 () | 19271..19666 | + | 396 | WP_004666661.1 | type II toxin-antitoxin system VapC family toxin | - |
| CN228_RS32495 () | 19827..20204 | - | 378 | WP_004666662.1 | hypothetical protein | - |
| CN228_RS32500 () | 20272..20508 | - | 237 | Protein_21 | Tn3 family transposase ISPsy42 | Transposase |
| CN228_RS32510 () | 20967..22598 | - | 1632 | WP_020358614.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| CN228_RS32515 () | 22772..23317 | + | 546 | Protein_23 | IS5 family transposase ISPsy19 | Transposase |
| CN228_RS32530 () | 24348..24725 | + | 378 | WP_003344294.1 | hypothetical protein | - |
| CN228_RS32535 () | 24772..25608 | + | 837 | WP_017684524.1 | DUF945 domain-containing protein | - |
| CN228_RS32540 () | 25676..25876 | + | 201 | WP_017684525.1 | hypothetical protein | - |
| CN228_RS32545 () | 25942..26220 | - | 279 | WP_017684526.1 | hypothetical protein | - |
| CN228_RS32555 () | 26518..26862 | - | 345 | WP_017684528.1 | hypothetical protein | - |
| CN228_RS32560 () | 27105..27434 | + | 330 | WP_003344297.1 | ribbon-helix-helix protein, CopG family | - |
| CN228_RS32565 () | 27445..29400 | + | 1956 | WP_017684529.1 | Protein TraI | Relaxase |
| CN228_RS32575 () | 29695..30537 | - | 843 | WP_005734710.1 | Transcriptional activator protein LasR | VF |
| CN228_RS32580 () | 30595..31188 | - | 594 | WP_005734709.1 | aminodeoxychorismate/anthranilate synthase component II | - |
| CN228_RS32585 () | 31185..32651 | - | 1467 | WP_005734708.1 | 2-amino-4-deoxychorismate synthase | VF |
| CN228_RS32590 () | 33281..34633 | + | 1353 | WP_017684531.1 | phenylacetate--CoA ligase family protein | - |
| CN228_RS32595 () | 34640..35185 | + | 546 | WP_005734707.1 | hypothetical protein | - |
| CN228_RS32600 () | 35187..35870 | + | 684 | WP_003319174.1 | iron-containing redox enzyme family protein | - |
| CN228_RS32605 () | 35874..36491 | + | 618 | WP_017699540.1 | flavodoxin family protein | - |
| CN228_RS32610 () | 36494..37402 | + | 909 | WP_017685046.1 | EamA family transporter | - |
| CN228_RS32615 () | 37389..38339 | + | 951 | WP_017685047.1 | alpha/beta fold hydrolase | - |
| CN228_RS32635 () | 39316..40608 | - | 1293 | WP_017685048.1 | glycoside hydrolase family 68 protein | - |
| CN228_RS32645 () | 40876..41496 | + | 621 | WP_005769724.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| CN228_RS32650 () | 41515..41811 | - | 297 | WP_080251826.1 | hypothetical protein | - |
| CN228_RS32665 () | 42462..44420 | + | 1959 | Protein_43 | type IV secretory system conjugative DNA transfer family protein | - |
| CN228_RS32675 () | 46086..47504 | + | 1419 | Protein_45 | hypothetical protein | VF |
| CN228_RS32680 () | 47532..47954 | + | 423 | WP_017684688.1 | hypothetical protein | - |
| CN228_RS32685 () | 47975..48538 | + | 564 | WP_010206573.1 | hypothetical protein | - |
| CN228_RS32690 () | 48726..49154 | + | 429 | WP_017704319.1 | GntR family transcriptional regulator | - |
| CN228_RS32695 () | 49234..49461 | + | 228 | WP_017684686.1 | hypothetical protein | - |
| CN228_RS32700 () | 49859..51172 | + | 1314 | WP_017684685.1 | replication initiation protein | - |
| CN228_RS32705 () | 51384..51698 | + | 315 | WP_017684684.1 | HU family DNA-binding protein | - |
| CN228_RS32715 () | 52292..52810 | + | 519 | WP_017684683.1 | DUF4113 domain-containing protein | - |
| CN228_RS32720 () | 52822..53043 | + | 222 | WP_017684682.1 | hypothetical protein | - |
| CN228_RS32725 () | 53497..53934 | + | 438 | WP_074291445.1 | DUF4113 domain-containing protein | - |
| CN228_RS32730 () | 54510..54761 | - | 252 | WP_020316509.1 | ribbon-helix-helix protein, CopG family | - |
| CN228_RS32735 () | 54847..55503 | - | 657 | WP_017685030.1 | AAA family ATPase | - |
| CN228_RS33190 () | 55619..55774 | + | 156 | WP_153303633.1 | hypothetical protein | - |
| CN228_RS32745 () | 56338..56886 | - | 549 | WP_017685033.1 | hypothetical protein | - |
| CN228_RS32750 () | 56997..57458 | + | 462 | WP_020365478.1 | SOS response-associated peptidase family protein | - |
| CN228_RS32755 () | 57728..57940 | - | 213 | Protein_60 | hypothetical protein | - |
| CN228_RS32760 () | 58041..58547 | - | 507 | Protein_61 | hypothetical protein | - |
| CN228_RS32765 () | 58711..59313 | - | 603 | Protein_62 | type III effector | - |
| CN228_RS32770 () | 59688..62132 | + | 2445 | WP_017685035.1 | hypothetical protein | - |
| CN228_RS32775 () | 62275..62499 | - | 225 | Protein_64 | transposase | - |
| CN228_RS32780 () | 63240..63485 | + | 246 | WP_017685036.1 | hypothetical protein | - |
| CN228_RS32790 () | 64040..64456 | + | 417 | WP_017704498.1 | hypothetical protein | - |
| CN228_RS32795 () | 64494..64724 | + | 231 | WP_017685038.1 | hypothetical protein | - |
| CN228_RS32800 () | 64814..65353 | + | 540 | WP_017685039.1 | hypothetical protein | - |
| CN228_RS32810 () | 67581..67760 | + | 180 | WP_017685223.1 | hypothetical protein | - |
| CN228_RS32815 () | 68028..68252 | + | 225 | WP_017699623.1 | carbon storage regulator | - |
| CN228_RS32820 () | 68282..68695 | + | 414 | WP_017685173.1 | TraR/DksA family transcriptional regulator | - |
| CN228_RS32825 () | 68733..68954 | + | 222 | WP_004666801.1 | hypothetical protein | - |
| CN228_RS32835 () | 69280..69900 | - | 621 | WP_005769724.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| CN228_RS32840 () | 70288..70698 | + | 411 | Protein_75 | ParA family protein | - |
| CN228_RS32850 () | 72207..72437 | - | 231 | Protein_77 | hypothetical protein | - |
| CN228_RS32855 () | 72438..72650 | - | 213 | Protein_78 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|