MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 68331 bp
Accession: NZ_CP032619 Location: 685382..753712 Organism: Pectobacterium carotovorum strain HG-49 Replicon: chromosome
Accession: NZ_CP032619 Location: 685382..753712 Organism: Pectobacterium carotovorum strain HG-49 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D7Z95_RS03085 | 680440..681792 | + | 1353 | WP_205947912.1 | 3-carboxy-cis,cis-muconate cycloisomerase | - |
| D7Z95_RS03090 | 681937..683358 | + | 1422 | WP_205947911.1 | DASS family sodium-coupled anion symporter | - |
| D7Z95_RS03095 | 683443..683610 | - | 168 | WP_205947910.1 | YqaE/Pmp3 family membrane protein | - |
| D7Z95_RS03100 | 683786..684172 | + | 387 | WP_015839750.1 | lysozyme inhibitor LprI family protein | - |
| D7Z95_RS03110 | 684414..685211 | + | 798 | WP_205947909.1 | DgsA anti-repressor MtfA | - |
| D7Z95_RS03120 | 685577..686854 | + | 1278 | WP_103808513.1 | Prophage integrase IntA ; Integrase | Integrase |
| D7Z95_RS03125 | 686913..687140 | - | 228 | WP_241007289.1 | Major exported protein | VF |
| D7Z95_RS03130 | 687577..688788 | + | 1212 | WP_205947908.1 | hypothetical protein | - |
| D7Z95_RS03135 | 689285..689788 | - | 504 | WP_205947907.1 | hypothetical protein | - |
| D7Z95_RS03140 | 689913..691301 | - | 1389 | WP_205947906.1 | hypothetical protein | - |
| D7Z95_RS03145 | 691366..691560 | - | 195 | WP_205947905.1 | ribbon-helix-helix protein, CopG family | - |
| D7Z95_RS03150 | 691803..691979 | + | 177 | WP_181828302.1 | hypothetical protein | - |
| D7Z95_RS03155 | 692097..692753 | - | 657 | WP_205947904.1 | His-Xaa-Ser repeat protein HxsA | - |
| D7Z95_RS03160 | 692750..693862 | - | 1113 | WP_205947903.1 | His-Xaa-Ser system radical SAM maturase HxsC | - |
| D7Z95_RS03165 | 693855..695249 | - | 1395 | WP_205947902.1 | His-Xaa-Ser system radical SAM maturase HxsB | - |
| D7Z95_RS03170 | 695246..695521 | - | 276 | WP_205947901.1 | His-Xaa-Ser system protein HxsD | - |
| D7Z95_RS03175 | 695978..697264 | - | 1287 | WP_205947900.1 | P-loop NTPase fold protein | - |
| D7Z95_RS03180 | 697938..698522 | + | 585 | WP_205947899.1 | hypothetical protein | - |
| D7Z95_RS03185 | 698528..698728 | - | 201 | WP_205947898.1 | hypothetical protein | - |
| D7Z95_RS03190 | 698884..699378 | - | 495 | WP_264042423.1 | hypothetical protein | - |
| D7Z95_RS03195 | 699417..700163 | - | 747 | WP_205947895.1 | hypothetical protein | - |
| D7Z95_RS03200 | 700299..700673 | + | 375 | WP_205947894.1 | hypothetical protein | - |
| D7Z95_RS03205 | 700642..701985 | + | 1344 | WP_205947893.1 | relaxase/mobilization nuclease domain-containing protein | - |
| D7Z95_RS03210 | 702304..703101 | + | 798 | WP_205947892.1 | hypothetical protein | - |
| D7Z95_RS03215 | 703137..703514 | + | 378 | WP_165324931.1 | hypothetical protein | - |
| D7Z95_RS03220 | 703541..703864 | + | 324 | WP_241007288.1 | hypothetical protein | - |
| D7Z95_RS03225 | 704087..704965 | - | 879 | WP_205947891.1 | DUF4145 domain-containing protein | - |
| D7Z95_RS03230 | 705310..705720 | - | 411 | WP_205947890.1 | hypothetical protein | - |
| D7Z95_RS03235 | 705818..706216 | - | 399 | WP_121304242.1 | hypothetical protein | - |
| D7Z95_RS03240 | 706217..707836 | - | 1620 | WP_205947889.1 | DNA-binding protein | - |
| D7Z95_RS03245 | 707836..709146 | - | 1311 | WP_205947888.1 | hypothetical protein ; Integrase | Integrase |
| D7Z95_RS03250 | 709148..710353 | - | 1206 | WP_205947887.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| D7Z95_RS03255 | 710723..710929 | - | 207 | WP_015730146.1 | AlpA family transcriptional regulator | - |
| D7Z95_RS03260 | 711008..711874 | - | 867 | WP_205538324.1 | DUF6387 family protein | - |
| D7Z95_RS03265 | 712286..713557 | + | 1272 | WP_205947886.1 | Prophage integrase IntA ; Integrase | Integrase |
| D7Z95_RS03270 | 713692..714006 | - | 315 | WP_025918867.1 | helix-turn-helix transcriptional regulator | - |
| D7Z95_RS03275 | 714192..714506 | - | 315 | WP_025918866.1 | helix-turn-helix transcriptional regulator | - |
| D7Z95_RS03280 | 714653..714925 | + | 273 | WP_039468625.1 | helix-turn-helix transcriptional regulator | - |
| D7Z95_RS03285 | 715340..716254 | + | 915 | WP_205947885.1 | hypothetical protein | - |
| D7Z95_RS03290 | 716409..716603 | + | 195 | WP_205592586.1 | AlpA family transcriptional regulator | - |
| D7Z95_RS03295 | 716620..717204 | + | 585 | WP_205947884.1 | DUF2857 domain-containing protein | - |
| D7Z95_RS03300 | 717194..717403 | + | 210 | WP_161528575.1 | TraR/DksA family transcriptional regulator | - |
| D7Z95_RS03305 | 717681..718460 | - | 780 | WP_205947883.1 | hypothetical protein | - |
| D7Z95_RS03310 | 718572..718775 | - | 204 | WP_205947882.1 | AbiH family protein | - |
| D7Z95_RS03315 | 719140..720681 | - | 1542 | WP_205947881.1 | hypothetical protein | - |
| D7Z95_RS03320 | 721203..721424 | + | 222 | WP_205947880.1 | hypothetical protein | - |
| D7Z95_RS03325 | 721503..722168 | + | 666 | WP_205947879.1 | Type IV secretion system protein virB1 | VF |
| D7Z95_RS03330 | 722165..722446 | + | 282 | WP_100017238.1 | TrbC/VirB2 family protein | - |
| D7Z95_RS03335 | 722456..725203 | + | 2748 | WP_205947878.1 | Type IV secretion system protein virB4 | VF |
| D7Z95_RS03340 | 725227..725943 | + | 717 | WP_205947877.1 | type IV secretion system protein | - |
| D7Z95_RS03345 | 725954..726178 | + | 225 | WP_205947876.1 | EexN family lipoprotein | - |
| D7Z95_RS03350 | 726190..727230 | + | 1041 | WP_205947875.1 | type IV secretion system protein | - |
| D7Z95_RS03355 | 727319..727459 | + | 141 | WP_025918851.1 | hypothetical protein | - |
| D7Z95_RS03360 | 727452..728135 | + | 684 | WP_025918850.1 | Type IV secretion system protein PtlE | VF |
| D7Z95_RS03365 | 728132..729025 | + | 894 | WP_205947874.1 | P-type conjugative transfer protein VirB9 | - |
| D7Z95_RS03370 | 729022..730245 | + | 1224 | WP_205947873.1 | Type IV secretion system protein virB10 | VF |
| D7Z95_RS03375 | 730235..731251 | + | 1017 | WP_205947872.1 | Type IV secretion system protein VirB11 | VF |
| D7Z95_RS03380 | 731289..731591 | + | 303 | WP_205947871.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| D7Z95_RS03385 | 732316..734178 | + | 1863 | WP_205947870.1 | type IV secretory system conjugative DNA transfer family protein | - |
| D7Z95_RS03390 | 734187..734933 | + | 747 | WP_205947869.1 | MobC family replication-relaxation protein | - |
| D7Z95_RS03395 | 735195..736115 | + | 921 | WP_205947868.1 | hypothetical protein | - |
| D7Z95_RS03400 | 736458..737618 | - | 1161 | WP_205947867.1 | IS30 family transposase ISCfr4 | Transposase |
| D7Z95_RS03405 | 737865..738602 | + | 738 | WP_205947866.1 | GTPase domain-containing protein | - |
| D7Z95_RS03410 | 738599..739207 | + | 609 | WP_264042453.1 | hypothetical protein | - |
| D7Z95_RS03415 | 739433..739867 | - | 435 | WP_205947864.1 | restriction endonuclease | - |
| D7Z95_RS03420 | 739876..741099 | - | 1224 | WP_264042456.1 | hypothetical protein | - |
| D7Z95_RS03425 | 741093..743576 | - | 2484 | WP_264042458.1 | RNA-directed DNA polymerase | - |
| D7Z95_RS03430 | 744269..744583 | - | 315 | WP_205947862.1 | CcdB family protein | Toxin Detail |
| D7Z95_RS03435 | 744586..744822 | - | 237 | WP_205947861.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| D7Z95_RS03440 | 745141..746088 | - | 948 | WP_205947860.1 | zincin-like metallopeptidase domain-containing protein | - |
| D7Z95_RS03445 | 746342..746626 | + | 285 | WP_241007308.1 | JAB domain-containing protein | - |
| D7Z95_RS03450 | 747104..748099 | + | 996 | WP_205947859.1 | restriction endonuclease | - |
| D7Z95_RS03455 | 748096..749184 | + | 1089 | WP_205947858.1 | hypothetical protein | - |
| D7Z95_RS03460 | 749181..749675 | + | 495 | WP_205947857.1 | threonine transporter | - |
| D7Z95_RS03465 | 749672..751576 | + | 1905 | WP_205947856.1 | ATP-binding protein | - |
| D7Z95_RS03470 | 751923..752942 | - | 1020 | WP_205947855.1 | DUF4917 family protein | - |
| D7Z95_RS03475 | 753892..755163 | + | 1272 | WP_205948159.1 | integrase arm-type DNA-binding domain-containing protein | - |
| D7Z95_RS03480 | 755437..756357 | - | 921 | WP_182099955.1 | DUF2971 domain-containing protein | - |
| D7Z95_RS03485 | 756389..757132 | - | 744 | WP_182099954.1 | FRG domain-containing protein | - |
| D7Z95_RS03490 | 757614..757799 | + | 186 | WP_205947854.1 | hypothetical protein | - |
| D7Z95_RS03495 | 757870..758337 | - | 468 | WP_182099952.1 | DUF6392 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|