MGE detailed information
MGE type: Prophage MGE length: 56187 bp
Accession: NZ_CP032618 Location: 1278859..1335045 Organism: Pseudomonas fluorescens strain PF08 Replicon: chromosome
Accession: NZ_CP032618 Location: 1278859..1335045 Organism: Pseudomonas fluorescens strain PF08 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D7M10_RS05710 () | 1275242..1276051 | + | 810 | WP_057441812.1 | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | - |
| D7M10_RS05715 () | 1276107..1276520 | - | 414 | WP_120731797.1 | SufE family protein | - |
| D7M10_RS05720 () | 1276517..1277722 | - | 1206 | WP_057439916.1 | cysteine desulfurase | - |
| D7M10_RS05725 () | 1277792..1278826 | - | 1035 | WP_057439915.1 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase | - |
| D7M10_RS05730 () | 1278859..1279221 | - | 363 | WP_120731798.1 | ArsC family reductase | - |
| D7M10_RS05735 () | 1279436..1280599 | + | 1164 | WP_120731800.1 | ATP-binding protein | - |
| D7M10_RS28055 () | 1280596..1281087 | + | 492 | WP_162947693.1 | hypothetical protein | - |
| D7M10_RS05740 () | 1281112..1282215 | - | 1104 | WP_120731802.1 | hypothetical protein ; Integrase | Integrase |
| D7M10_RS05745 () | 1282196..1282438 | - | 243 | WP_120731804.1 | excisionase | - |
| D7M10_RS05750 () | 1282435..1282662 | - | 228 | Protein_1099 | hypothetical protein | - |
| D7M10_RS05755 () | 1282769..1283524 | + | 756 | WP_162947694.1 | DUF4145 domain-containing protein | - |
| D7M10_RS05760 () | 1283551..1284474 | - | 924 | WP_120731808.1 | DNA cytosine methyltransferase | - |
| D7M10_RS05765 () | 1284547..1284780 | + | 234 | WP_120731810.1 | hypothetical protein | - |
| D7M10_RS05770 () | 1284853..1285707 | + | 855 | WP_120731812.1 | hypothetical protein | - |
| D7M10_RS05775 () | 1285671..1286534 | - | 864 | WP_120731814.1 | hypothetical protein | - |
| D7M10_RS05780 () | 1286632..1286862 | + | 231 | WP_120731816.1 | hypothetical protein | - |
| D7M10_RS05785 () | 1286859..1287881 | - | 1023 | WP_120731818.1 | nucleoid-associated protein YejK | - |
| D7M10_RS28060 () | 1287992..1288156 | + | 165 | WP_162947695.1 | hypothetical protein | - |
| D7M10_RS05790 () | 1288197..1288682 | - | 486 | WP_120731820.1 | hypothetical protein | - |
| D7M10_RS05795 () | 1288767..1289429 | - | 663 | WP_057442113.1 | YqaJ viral recombinase family protein | - |
| D7M10_RS05800 () | 1289429..1290418 | - | 990 | WP_120731822.1 | recombinase RecT | - |
| D7M10_RS05805 () | 1290472..1291575 | - | 1104 | WP_120734399.1 | hypothetical protein | - |
| D7M10_RS05810 () | 1291687..1291914 | - | 228 | WP_120731824.1 | hypothetical protein | - |
| D7M10_RS05815 () | 1291911..1292141 | - | 231 | WP_120731826.1 | hypothetical protein | - |
| D7M10_RS28065 () | 1292557..1292700 | - | 144 | WP_162947696.1 | hypothetical protein | - |
| D7M10_RS05825 () | 1292930..1293130 | - | 201 | WP_120731830.1 | hypothetical protein | - |
| D7M10_RS05830 () | 1293619..1293930 | + | 312 | WP_120731831.1 | DUF1654 domain-containing protein | - |
| D7M10_RS05835 () | 1294316..1295110 | - | 795 | WP_162947697.1 | hypothetical protein | - |
| D7M10_RS05840 () | 1295198..1295437 | - | 240 | WP_120731836.1 | hypothetical protein | - |
| D7M10_RS05845 () | 1295442..1296302 | - | 861 | WP_120731838.1 | S24 family peptidase | - |
| D7M10_RS05850 () | 1296398..1296652 | + | 255 | WP_120731840.1 | helix-turn-helix domain-containing protein | - |
| D7M10_RS05855 () | 1296703..1297320 | + | 618 | WP_120731842.1 | hypothetical protein | - |
| D7M10_RS05860 () | 1297466..1298320 | + | 855 | WP_120731844.1 | Rha family transcriptional regulator | - |
| D7M10_RS05865 () | 1298320..1299270 | + | 951 | WP_120731846.1 | hypothetical protein | - |
| D7M10_RS05870 () | 1299251..1300033 | + | 783 | WP_120731848.1 | ATP-binding protein | - |
| D7M10_RS05875 () | 1300033..1300362 | + | 330 | WP_120731850.1 | hypothetical protein | - |
| D7M10_RS05880 () | 1300355..1300942 | + | 588 | WP_120731852.1 | DUF1367 family protein | - |
| D7M10_RS05885 () | 1300939..1301613 | + | 675 | WP_120731854.1 | recombination protein NinG | - |
| D7M10_RS05890 () | 1301610..1302287 | + | 678 | WP_120731856.1 | hypothetical protein | - |
| D7M10_RS05895 () | 1302659..1302859 | - | 201 | WP_120731857.1 | hypothetical protein | - |
| D7M10_RS05900 () | 1302892..1303527 | - | 636 | WP_120731860.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| D7M10_RS05905 () | 1303579..1303758 | - | 180 | WP_003229979.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| D7M10_RS05910 () | 1303846..1304217 | + | 372 | WP_105523600.1 | chemotaxis protein | - |
| D7M10_RS05915 () | 1304217..1304534 | + | 318 | WP_057959962.1 | hypothetical protein | - |
| D7M10_RS05920 () | 1304588..1304803 | + | 216 | WP_120731862.1 | hypothetical protein | - |
| D7M10_RS05925 () | 1304800..1304991 | + | 192 | WP_120731864.1 | hypothetical protein | - |
| D7M10_RS05930 () | 1304988..1305242 | + | 255 | WP_120731866.1 | hypothetical protein | - |
| D7M10_RS05935 () | 1305274..1305483 | - | 210 | WP_120731868.1 | hypothetical protein | - |
| D7M10_RS05940 () | 1305573..1306172 | + | 600 | WP_120731870.1 | hypothetical protein | - |
| D7M10_RS05945 () | 1306174..1307664 | + | 1491 | WP_120731872.1 | terminase | - |
| D7M10_RS05950 () | 1307664..1309124 | + | 1461 | WP_120731873.1 | DUF4055 domain-containing protein | - |
| D7M10_RS05955 () | 1309060..1310154 | + | 1095 | WP_205576971.1 | minor capsid protein | - |
| D7M10_RS05960 () | 1310163..1310645 | + | 483 | WP_120731877.1 | hypothetical protein | - |
| D7M10_RS05965 () | 1310713..1311351 | + | 639 | WP_120731879.1 | hypothetical protein | - |
| D7M10_RS05970 () | 1311460..1312197 | + | 738 | WP_120734400.1 | hypothetical protein | - |
| D7M10_RS05975 () | 1312201..1313178 | + | 978 | WP_120731881.1 | phage coat protein | - |
| D7M10_RS05980 () | 1313235..1313540 | + | 306 | WP_120731883.1 | hypothetical protein | - |
| D7M10_RS05985 () | 1313551..1313928 | + | 378 | WP_120731885.1 | hypothetical protein | - |
| D7M10_RS05990 () | 1313931..1314323 | + | 393 | WP_120731887.1 | hypothetical protein | - |
| D7M10_RS05995 () | 1314325..1314909 | + | 585 | WP_120731889.1 | hypothetical protein | - |
| D7M10_RS06000 () | 1314906..1315322 | + | 417 | WP_120731892.1 | DUF4128 domain-containing protein | - |
| D7M10_RS06005 () | 1315395..1316051 | + | 657 | WP_032880701.1 | phage tail protein | - |
| D7M10_RS06010 () | 1316055..1316435 | + | 381 | WP_032880702.1 | phage tail assembly chaperone | - |
| D7M10_RS06015 () | 1316453..1316755 | + | 303 | WP_120731894.1 | DUF1799 domain-containing protein | - |
| D7M10_RS06020 () | 1316783..1319827 | + | 3045 | WP_120731896.1 | phage tail tape measure protein | - |
| D7M10_RS06025 () | 1319831..1320169 | + | 339 | WP_120731897.1 | phage tail protein | - |
| D7M10_RS06030 () | 1320181..1320933 | + | 753 | WP_120731899.1 | phage minor tail protein L | - |
| D7M10_RS06035 () | 1320936..1321700 | + | 765 | WP_120731901.1 | C40 family peptidase | - |
| D7M10_RS06040 () | 1321844..1322107 | - | 264 | WP_120731903.1 | hypothetical protein | - |
| D7M10_RS06045 () | 1322188..1322448 | - | 261 | WP_120731905.1 | protein L | - |
| D7M10_RS06050 () | 1322711..1323388 | + | 678 | WP_120731907.1 | hypothetical protein | - |
| D7M10_RS06055 () | 1323486..1323836 | + | 351 | WP_120731909.1 | hypothetical protein | - |
| D7M10_RS06060 () | 1323900..1324511 | + | 612 | WP_120731911.1 | tail assembly protein | - |
| D7M10_RS06065 () | 1324571..1327117 | + | 2547 | Protein_1163 | host specificity protein J | - |
| D7M10_RS06070 () | 1327613..1329640 | + | 2028 | WP_120734401.1 | DUF1983 domain-containing protein | - |
| D7M10_RS06075 () | 1329731..1330126 | + | 396 | WP_120731913.1 | hypothetical protein | - |
| D7M10_RS06080 () | 1330128..1330853 | + | 726 | WP_120731915.1 | hypothetical protein | - |
| D7M10_RS28395 () | 1330892..1331650 | + | 759 | WP_205576965.1 | hypothetical protein | - |
| D7M10_RS06090 () | 1331653..1332201 | + | 549 | WP_120731917.1 | tail fiber assembly protein | - |
| D7M10_RS06095 () | 1332273..1332485 | + | 213 | WP_120731919.1 | hypothetical protein | - |
| D7M10_RS06100 () | 1332546..1332970 | + | 425 | Protein_1170 | cell wall hydrolase | - |
| D7M10_RS06105 () | 1332967..1333488 | + | 522 | WP_120731921.1 | DUF2514 domain-containing protein | - |
| D7M10_RS28070 () | 1333518..1334267 | - | 750 | WP_162947698.1 | hypothetical protein | - |
| D7M10_RS06110 () | 1334353..1335045 | - | 693 | WP_120731923.1 | SOS response-associated peptidase family protein | - |
| D7M10_RS06115 () | 1335068..1335415 | - | 348 | WP_120731925.1 | hypothetical protein | - |
| D7M10_RS06120 () | 1335513..1335719 | - | 207 | WP_120731927.1 | hypothetical protein | - |
| D7M10_RS06130 () | 1336214..1337857 | + | 1644 | WP_057958692.1 | Na+/H+ antiporter | - |
| D7M10_RS06135 () | 1337938..1339137 | - | 1200 | WP_120731929.1 | succinyldiaminopimelate transaminase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|