MGE detailed information
MGE type: Prophage MGE length: 49903 bp
Accession: NZ_CP032523 Location: 4072993..4122895 Organism: Shigella sonnei strain AR_0030 Replicon: chromosome
Accession: NZ_CP032523 Location: 4072993..4122895 Organism: Shigella sonnei strain AR_0030 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM357_RS20945 (4068383) | 4068383..4069069 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| AM357_RS20950 (4069246) | 4069246..4069449 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| AM357_RS20955 (4069485) | 4069485..4070945 | - | 1461 | WP_000527756.1 | mannitol dehydrogenase family protein | - |
| AM357_RS20965 (4071914) | 4071914..4072996 | - | 1083 | WP_001053102.1 | BsuBI/PstI family type II restriction endonuclease | - |
| AM357_RS20970 (4072993) | 4072993..4074825 | - | 1833 | WP_000113426.1 | N-6 DNA methylase | - |
| AM357_RS20975 (4075040) | 4075040..4075396 | - | 357 | WP_005140877.1 | hypothetical protein | - |
| AM357_RS20980 (4075454) | 4075454..4075876 | - | 423 | WP_001151171.1 | DUF977 family protein | - |
| AM357_RS20985 (4075892) | 4075892..4076617 | - | 726 | WP_000450631.1 | DUF1627 domain-containing protein | - |
| AM357_RS20990 (4076639) | 4076639..4077385 | - | 747 | WP_000788740.1 | ATP-binding protein | - |
| AM357_RS20995 (4077392) | 4077392..4078456 | - | 1065 | WP_001262380.1 | hypothetical protein | - |
| AM357_RS21000 (4078528) | 4078528..4078953 | - | 426 | WP_000693826.1 | toxin YdaT family protein | - |
| AM357_RS21005 (4078950) | 4078950..4079213 | - | 264 | WP_001048456.1 | helix-turn-helix transcriptional regulator | - |
| AM357_RS21010 (4079340) | 4079340..4079825 | + | 486 | WP_053002468.1 | helix-turn-helix domain-containing protein | - |
| AM357_RS21015 (4079845) | 4079845..4080039 | + | 195 | WP_005142544.1 | hypothetical protein | Antitoxin Detail |
| AM357_RS21020 (4080039) | 4080039..4080329 | + | 291 | WP_014334020.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AM357_RS21025 (4080608) | 4080608..4080760 | + | 153 | WP_000379558.1 | DUF1391 family protein | - |
| AM357_RS21030 (4080772) | 4080772..4081137 | + | 366 | WP_024174355.1 | hypothetical protein | - |
| AM357_RS27505 (4082039) | 4082039..4082134 | + | 96 | Protein_4057 | transcriptional regulator | - |
| AM357_RS21045 (4082145) | 4082145..4082333 | + | 189 | WP_000449206.1 | cell division inhibition protein DicB | - |
| AM357_RS21050 (4082330) | 4082330..4082521 | + | 192 | WP_001090204.1 | DUF1482 family protein | - |
| AM357_RS21055 (4082615) | 4082615..4083673 | + | 1059 | Protein_4060 | exonuclease | - |
| AM357_RS21065 (4084939) | 4084939..4085181 | + | 243 | Protein_4062 | benzoate/H(+) symporter BenE family transporter | - |
| AM357_RS21070 (4085221) | 4085221..4086429 | - | 1209 | WP_000826419.1 | IS200-IS605 family transposase IS609 | Transposase |
| AM357_RS21075 (4086437) | 4086437..4086938 | + | 502 | Protein_4064 | IS200/IS605 family transposase | - |
| AM357_RS21080 (4086956) | 4086956..4087624 | - | 669 | Protein_4065 | DUF3313 domain-containing protein | - |
| AM357_RS21090 (4088704) | 4088704..4089297 | - | 594 | WP_000586732.1 | tellurite resistance methyltransferase TehB | - |
| AM357_RS21095 (4089294) | 4089294..4090286 | - | 993 | WP_001341359.1 | dicarboxylate transporter/tellurite-resistance protein TehA | - |
| AM357_RS21100 (4090410) | 4090410..4091390 | + | 981 | WP_001234073.1 | YdcK family protein | - |
| AM357_RS21105 (4091385) | 4091385..4091921 | - | 537 | WP_000140884.1 | 50S ribosomal protein L7/L12-serine acetyltransferase | - |
| AM357_RS21110 (4091984) | 4091984..4092208 | - | 225 | WP_001296778.1 | YdcH family protein | - |
| AM357_RS21115 (4092348) | 4092348..4094003 | - | 1656 | WP_000375956.1 | glucan biosynthesis protein OpgD | - |
| AM357_RS21120 (4094270) | 4094270..4095571 | - | 1302 | WP_000013788.1 | VOC family protein | - |
| AM357_RS21125 (4095788) | 4095788..4096711 | + | 924 | WP_000414564.1 | LysR substrate-binding domain-containing protein | - |
| AM357_RS21130 (4096749) | 4096749..4098389 | - | 1641 | WP_001098543.1 | Methyl-accepting chemotaxis protein III | VF |
| AM357_RS21140 (4098788) | 4098788..4098937 | + | 150 | WP_001320773.1 | type I toxin-antitoxin system toxin HokB | - |
| AM357_RS27510 (4098915) | 4098915..4098983 | - | 69 | WP_212591405.1 | hypothetical protein | - |
| AM357_RS21145 (4099002) | 4099002..4099181 | - | 180 | WP_000731830.1 | hypothetical protein | - |
| AM357_RS21150 (4099426) | 4099426..4099956 | - | 531 | WP_005136298.1 | cytochrome b561 | - |
| AM357_RS21155 (4100145) | 4100145..4100969 | + | 825 | Protein_4080 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
| AM357_RS21165 (4102234) | 4102234..4102413 | + | 180 | Protein_4082 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
| AM357_RS21170 (4102455) | 4102455..4103000 | - | 546 | Protein_4083 | aldehyde dehydrogenase family protein | - |
| AM357_RS21175 (4103001) | 4103001..4103132 | + | 132 | Protein_4084 | YdcF family protein | - |
| AM357_RS21180 (4103329) | 4103329..4104225 | + | 897 | Protein_4085 | aldehyde dehydrogenase | - |
| AM357_RS21190 (4105478) | 4105478..4106158 | - | 681 | WP_001027948.1 | YdcF family protein | - |
| AM357_RS21195 (4106430) | 4106430..4110332 | - | 3903 | WP_000139576.1 | ATP-dependent RNA helicase HrpA | - |
| AM357_RS21200 (4110533) | 4110533..4111138 | + | 606 | WP_000048948.1 | FMN-dependent NADH-azoreductase | - |
| AM357_RS21205 (4111189) | 4111189..4112505 | - | 1317 | WP_000627394.1 | phosphatase PAP2/dual specificity phosphatase family protein | - |
| AM357_RS21210 (4112495) | 4112495..4114252 | - | 1758 | WP_000431894.1 | bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase | - |
| AM357_RS21215 (4114268) | 4114268..4115191 | - | 924 | WP_049801002.1 | Phosphatidate cytidylyltransferase | VF |
| AM357_RS21220 (4115184) | 4115184..4116026 | - | 843 | Protein_4093 | IS3 family transposase IS600 | Transposase |
| AM357_RS21230 (4117276) | 4117276..4117592 | - | 317 | Protein_4095 | IS3 family transposase ISSfl10 | Transposase |
| AM357_RS21235 (4117656) | 4117656..4118225 | + | 570 | Protein_4096 | transcriptional regulator FeaR | - |
| AM357_RS21240 (4118216) | 4118216..4119381 | + | 1166 | Protein_4097 | IS3 family transposase IS2 | Transposase |
| AM357_RS21245 (4119395) | 4119395..4119568 | + | 174 | Protein_4098 | helix-turn-helix domain-containing protein | - |
| AM357_RS21250 (4119740) | 4119740..4120069 | - | 330 | WP_001325798.1 | YdbL family protein | - |
| AM357_RS21255 (4120074) | 4120074..4120259 | - | 186 | WP_000698145.1 | YnbE family lipoprotein | - |
| AM357_RS21260 (4120256) | 4120256..4122895 | - | 2640 | WP_000900907.1 | YdbH family protein | - |
| AM357_RS21265 (4123103) | 4123103..4124092 | + | 990 | WP_000762229.1 | D-lactate dehydrogenase | - |
| AM357_RS21270 (4124203) | 4124203..4124625 | + | 423 | WP_001298828.1 | heat shock protein HslJ | - |
| AM357_RS21275 (4124622) | 4124622..4124888 | - | 267 | WP_001295715.1 | DUF333 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|