MGE detailed information
MGE type: Prophage MGE length: 34204 bp
Accession: NZ_CP032523 Location: 3567611..3601814 Organism: Shigella sonnei strain AR_0030 Replicon: chromosome
Accession: NZ_CP032523 Location: 3567611..3601814 Organism: Shigella sonnei strain AR_0030 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM357_RS18245 () | 3563694..3564335 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| AM357_RS18250 () | 3564391..3565569 | - | 1179 | WP_000173484.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| AM357_RS18255 () | 3565703..3565993 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| AM357_RS18260 () | 3566060..3566416 | + | 357 | WP_001295500.1 | protein YebF | - |
| AM357_RS18265 () | 3566743..3567402 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| AM357_RS18270 () | 3567611..3569671 | + | 2061 | WP_000936913.1 | oligopeptidase B | - |
| AM357_RS18275 () | 3569668..3570330 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| AM357_RS18280 () | 3570354..3571010 | - | 657 | WP_000011652.1 | carbon-nitrogen hydrolase family protein YobB | - |
| AM357_RS18285 () | 3571112..3571342 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| AM357_RS18290 () | 3571481..3571855 | + | 375 | WP_000168735.1 | CopC domain-containing protein YobA | - |
| AM357_RS18295 () | 3571859..3572731 | + | 873 | WP_000879296.1 | copper homeostasis membrane protein CopD | - |
| AM357_RS18300 () | 3572744..3573085 | + | 342 | WP_000976476.1 | YebY family protein | - |
| - | 3573113..3573347 | - | 235 | - | - | Antitoxin Detail |
| - | 3573243..3573346 | + | 104 | - | - | Toxin Detail |
| AM357_RS18305 () | 3573478..3574554 | - | 1077 | WP_001189101.1 | hypothetical protein ; Integrase | Integrase |
| AM357_RS18325 () | 3576650..3576766 | - | 117 | Protein_3518 | host-nuclease inhibitor Gam family protein | - |
| AM357_RS27085 () | 3576744..3577064 | - | 321 | WP_241556168.1 | exodeoxyribonuclease VIII | - |
| AM357_RS18340 () | 3577312..3578468 | + | 1157 | WP_094096605.1 | IS3 family transposase IS600 | Transposase |
| AM357_RS18355 () | 3579836..3581542 | - | 1707 | WP_000936825.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| AM357_RS18370 () | 3583560..3583733 | + | 174 | Protein_3524 | metallophosphoesterase | - |
| AM357_RS18380 () | 3584499..3584804 | + | 306 | Protein_3526 | serine/threonine-protein phosphatase | - |
| AM357_RS18385 () | 3584862..3586018 | + | 1157 | WP_094096605.1 | IS3 family transposase IS600 | Transposase |
| AM357_RS18390 () | 3586060..3586260 | + | 201 | Protein_3528 | serine/threonine-protein phosphatase | - |
| AM357_RS18395 () | 3586261..3586452 | - | 192 | WP_001296140.1 | YebW family protein | - |
| AM357_RS18400 () | 3586557..3586715 | - | 159 | Protein_3530 | DUF1480 family protein | - |
| AM357_RS18405 () | 3586773..3587470 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| AM357_RS26900 () | 3587487..3587570 | - | 84 | Protein_3532 | DUF1480 family protein | - |
| AM357_RS18410 () | 3587688..3589127 | - | 1440 | WP_005138560.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| AM357_RS18415 () | 3589208..3591841 | - | 2634 | WP_005138565.1 | hypothetical protein | VF |
| AM357_RS18420 () | 3591810..3593093 | - | 1284 | WP_001207284.1 | membrane integrity lipid transport subunit YebS | - |
| AM357_RS18425 () | 3593223..3593720 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| AM357_RS18430 () | 3593817..3594515 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| AM357_RS18435 () | 3594535..3596583 | + | 2049 | WP_024261239.1 | carboxy terminal-processing peptidase | - |
| AM357_RS18440 () | 3596775..3597656 | + | 882 | WP_000984517.1 | protease HtpX | - |
| AM357_RS18445 () | 3597702..3598765 | - | 1064 | Protein_3540 | MFS transporter | - |
| AM357_RS18450 () | 3598942..3599733 | + | 792 | WP_001262174.1 | DNA-binding transcriptional regulator KdgR | - |
| AM357_RS18455 () | 3599876..3600115 | - | 240 | WP_001211011.1 | YobH family protein | - |
| AM357_RS18460 () | 3600274..3600417 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| AM357_RS18465 () | 3600492..3600779 | + | 288 | WP_001006860.1 | YebO family protein | - |
| AM357_RS18470 () | 3601449..3601592 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| AM357_RS18475 () | 3601605..3601814 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| AM357_RS18480 () | 3601980..3602789 | + | 810 | WP_000010143.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| AM357_RS18485 () | 3602786..3603352 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| AM357_RS18490 () | 3603781..3604239 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| AM357_RS18495 () | 3604294..3605145 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| AM357_RS18500 () | 3605158..3605958 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|