MGE detailed information
MGE type: Prophage MGE length: 65075 bp
Accession: NZ_CP032487 Location: 1506167..1571241 Organism: Yersinia hibernica strain CFS1934 Replicon: chromosome
Accession: NZ_CP032487 Location: 1506167..1571241 Organism: Yersinia hibernica strain CFS1934 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D5F51_RS06970 () | 1501370..1501726 | + | 357 | WP_162301830.1 | protein YebF | - |
| D5F51_RS06975 () | 1501918..1503972 | + | 2055 | WP_129195981.1 | prolyl oligopeptidase family serine peptidase | - |
| D5F51_RS06980 () | 1503987..1504646 | - | 660 | WP_025378529.1 | exodeoxyribonuclease X | - |
| D5F51_RS06985 () | 1505162..1506118 | + | 957 | WP_129195982.1 | prolyl aminopeptidase | - |
| D5F51_RS06990 () | 1506167..1506400 | - | 234 | WP_025378527.1 | DNA polymerase III subunit theta | - |
| D5F51_RS06995 () | 1506795..1507304 | + | 510 | WP_025378526.1 | non-heme ferritin | - |
| D5F51_RS07000 () | 1507696..1508082 | + | 387 | WP_129195983.1 | CopC domain-containing protein YobA | - |
| D5F51_RS07005 () | 1508084..1508968 | + | 885 | WP_129195984.1 | copper homeostasis membrane protein CopD | - |
| D5F51_RS07010 () | 1509065..1509406 | + | 342 | WP_129199241.1 | YebY family protein | - |
| - () | 1509578..1509670 | + | 93 | - | - | Toxin Detail |
| - () | 1509578..1509674 | - | 97 | - | - | Antitoxin Detail |
| D5F51_RS07015 () | 1509749..1510831 | - | 1083 | WP_129195985.1 | hypothetical protein ; Integrase | Integrase |
| D5F51_RS07020 () | 1510806..1511072 | - | 267 | WP_025378521.1 | excisionase | - |
| D5F51_RS07025 () | 1511145..1511657 | - | 513 | WP_025378520.1 | siphovirus Gp157 family protein | - |
| D5F51_RS07030 () | 1511654..1513807 | - | 2154 | WP_129195986.1 | hypothetical protein | - |
| D5F51_RS07035 () | 1513821..1514135 | - | 315 | WP_042546155.1 | hypothetical protein | - |
| D5F51_RS07040 () | 1514324..1514656 | - | 333 | WP_061111990.1 | hypothetical protein | - |
| D5F51_RS07045 () | 1514670..1514843 | - | 174 | WP_100273932.1 | DUF1482 family protein | - |
| D5F51_RS07050 () | 1514956..1515267 | - | 312 | WP_057627727.1 | hypothetical protein | - |
| D5F51_RS07055 () | 1515441..1515833 | - | 393 | WP_042546154.1 | helix-turn-helix domain-containing protein | - |
| D5F51_RS07060 () | 1515916..1516113 | + | 198 | WP_057627725.1 | helix-turn-helix domain-containing protein | - |
| D5F51_RS07065 () | 1516154..1516594 | + | 441 | WP_129195987.1 | tRNA-(guanine-N1)-methyltransferase | - |
| D5F51_RS07070 () | 1516608..1516847 | + | 240 | WP_129195988.1 | cell envelope biogenesis protein OmpA | - |
| D5F51_RS07075 () | 1516852..1517040 | + | 189 | WP_129195989.1 | hypothetical protein | - |
| D5F51_RS07080 () | 1517053..1518087 | + | 1035 | WP_129195990.1 | hypothetical protein | - |
| D5F51_RS07085 () | 1518116..1518523 | + | 408 | WP_025378510.1 | replication protein | - |
| D5F51_RS07090 () | 1518538..1519038 | + | 501 | WP_050127470.1 | hypothetical protein | - |
| D5F51_RS07095 () | 1519035..1521095 | + | 2061 | WP_129195991.1 | DNA cytosine methyltransferase | - |
| D5F51_RS07100 () | 1521243..1521425 | + | 183 | WP_098057202.1 | hypothetical protein | - |
| D5F51_RS07110 () | 1521499..1522092 | + | 594 | WP_048615665.1 | DUF1367 family protein | - |
| D5F51_RS07115 () | 1522101..1522385 | + | 285 | WP_048615663.1 | DUF1364 domain-containing protein | - |
| D5F51_RS07120 () | 1522427..1522783 | + | 357 | WP_129199244.1 | antitermination protein | - |
| D5F51_RS07125 () | 1522775..1523989 | - | 1215 | WP_129195992.1 | hypothetical protein | - |
| D5F51_RS07130 () | 1523982..1525136 | - | 1155 | WP_129195993.1 | nucleoid-associated protein | - |
| D5F51_RS07135 () | 1525430..1525645 | + | 216 | WP_019082932.1 | peptidoglycan-binding protein LysM | - |
| D5F51_RS07140 () | 1525645..1526175 | + | 531 | WP_129195994.1 | lysozyme | - |
| D5F51_RS07145 () | 1526168..1526500 | + | 333 | WP_129195995.1 | DUF2570 domain-containing protein | - |
| D5F51_RS07155 () | 1526853..1527272 | + | 420 | WP_050328218.1 | hypothetical protein | - |
| D5F51_RS07160 () | 1527592..1528101 | + | 510 | WP_129195997.1 | ParB/Srx family N-terminal domain-containing protein | - |
| D5F51_RS07165 () | 1528098..1528712 | + | 615 | WP_050291230.1 | hypothetical protein | - |
| D5F51_RS07170 () | 1528715..1528975 | + | 261 | WP_050127482.1 | hypothetical protein | - |
| D5F51_RS07175 () | 1528979..1529986 | + | 1008 | WP_129195998.1 | terminase small subunit | - |
| D5F51_RS07180 () | 1530040..1530360 | + | 321 | WP_050916801.1 | hypothetical protein | - |
| D5F51_RS07185 () | 1530457..1531338 | - | 882 | WP_050916802.1 | FRG domain-containing protein | - |
| D5F51_RS07190 () | 1531525..1533168 | + | 1644 | WP_129195999.1 | phage terminase large subunit | - |
| D5F51_RS07195 () | 1533171..1534556 | + | 1386 | WP_129196000.1 | DUF1073 domain-containing protein | - |
| D5F51_RS07200 () | 1534615..1535364 | + | 750 | WP_129199246.1 | phage head morphogenesis protein | - |
| D5F51_RS07205 () | 1535376..1536575 | + | 1200 | WP_129196001.1 | DUF2213 domain-containing protein | - |
| D5F51_RS07210 () | 1536575..1537099 | + | 525 | WP_025378623.1 | hypothetical protein | - |
| D5F51_RS07215 () | 1537118..1538053 | + | 936 | WP_025378622.1 | hypothetical protein ; Integrase | Integrase |
| D5F51_RS07220 () | 1538056..1538436 | + | 381 | WP_025378621.1 | hypothetical protein | - |
| D5F51_RS07225 () | 1538461..1538868 | + | 408 | WP_025378620.1 | DUF4054 domain-containing protein | - |
| D5F51_RS07230 () | 1538865..1539332 | + | 468 | WP_025378619.1 | hypothetical protein | - |
| D5F51_RS07235 () | 1539335..1539754 | + | 420 | WP_025378482.1 | hypothetical protein | - |
| D5F51_RS07240 () | 1539754..1540314 | + | 561 | WP_129196002.1 | hypothetical protein | - |
| D5F51_RS07245 () | 1540298..1541455 | + | 1158 | WP_129196003.1 | DUF3383 family protein | - |
| D5F51_RS07250 () | 1541462..1541866 | + | 405 | WP_025378479.1 | hypothetical protein | - |
| D5F51_RS07255 () | 1541869..1542261 | + | 393 | WP_129196004.1 | hypothetical protein | - |
| D5F51_RS07260 () | 1542524..1543102 | + | 579 | WP_050329331.1 | hypothetical protein | - |
| D5F51_RS07265 () | 1543056..1543388 | + | 333 | WP_050329329.1 | hypothetical protein | - |
| D5F51_RS07270 () | 1543506..1545170 | + | 1665 | WP_129196005.1 | glycoside hydrolase family 104 protein | - |
| D5F51_RS07275 () | 1545170..1545838 | + | 669 | WP_129196006.1 | hypothetical protein | - |
| D5F51_RS07280 () | 1545838..1546128 | + | 291 | WP_129196007.1 | hypothetical protein | - |
| D5F51_RS07285 () | 1546121..1547014 | + | 894 | WP_129196008.1 | hypothetical protein | - |
| D5F51_RS07290 () | 1547022..1547699 | + | 678 | WP_129199248.1 | hypothetical protein | - |
| D5F51_RS07295 () | 1547772..1548122 | + | 351 | WP_025378609.1 | hypothetical protein | - |
| D5F51_RS07300 () | 1548122..1549321 | + | 1200 | WP_129196009.1 | baseplate J/gp47 family protein | - |
| D5F51_RS07305 () | 1549314..1549958 | + | 645 | WP_019079691.1 | DUF2612 domain-containing protein | - |
| D5F51_RS07310 () | 1549972..1550751 | + | 780 | Protein_1392 | hypothetical protein | - |
| D5F51_RS07315 () | 1550976..1551464 | + | 489 | WP_129196010.1 | tail fiber assembly protein | - |
| D5F51_RS07320 () | 1551501..1553465 | - | 1965 | WP_129196011.1 | O-acetyltransferase OatA | VF |
| D5F51_RS07325 () | 1554142..1555158 | + | 1017 | WP_050135371.1 | hypothetical protein | - |
| D5F51_RS07330 () | 1555660..1557066 | - | 1407 | WP_046694917.1 | hypothetical protein | - |
| D5F51_RS07335 () | 1557746..1558033 | + | 288 | Protein_1397 | phage N-6-adenine-methyltransferase | - |
| D5F51_RS07340 () | 1558030..1558677 | + | 648 | WP_129196012.1 | DUF1367 family protein | - |
| D5F51_RS07345 () | 1558679..1558930 | + | 252 | WP_129196013.1 | DUF1364 family protein | - |
| D5F51_RS07355 () | 1559898..1560116 | - | 219 | WP_050130796.1 | hypothetical protein | - |
| D5F51_RS07360 () | 1560097..1560738 | - | 642 | WP_129196015.1 | hypothetical protein | - |
| D5F51_RS07370 () | 1562351..1562455 | + | 105 | WP_129196016.1 | ESPR domain-containing protein | - |
| D5F51_RS07380 () | 1563225..1566950 | + | 3726 | WP_129196017.1 | Outer membrane protein IcsA autotransporter | VF |
| D5F51_RS07385 () | 1567362..1567604 | + | 243 | WP_129196018.1 | tail fiber assembly protein | - |
| D5F51_RS07390 () | 1567638..1567964 | - | 327 | WP_129196019.1 | DUF1493 family protein | - |
| D5F51_RS22485 () | 1568341..1568730 | - | 390 | WP_162301831.1 | hypothetical protein | - |
| D5F51_RS07405 () | 1569667..1570047 | - | 381 | WP_206197189.1 | hypothetical protein | - |
| D5F51_RS07410 () | 1570051..1570748 | + | 698 | WP_129196021.1 | IS1 family transposase | - |
| D5F51_RS07415 () | 1570777..1571228 | + | 452 | Protein_1412 | terminase | - |
| D5F51_RS07420 () | 1571529..1572100 | + | 572 | Protein_1413 | peptidoglycan-binding domain-containing protein | - |
| D5F51_RS07425 () | 1572054..1572386 | + | 333 | WP_162301707.1 | hypothetical protein | - |
| D5F51_RS07430 () | 1572395..1573417 | - | 1023 | WP_129196023.1 | hypothetical protein | - |
| D5F51_RS07435 () | 1574158..1575090 | + | 933 | WP_129196024.1 | omptin family outer membrane protease | - |
| D5F51_RS07440 () | 1575600..1575839 | - | 240 | WP_129199250.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|