MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 146176 bp
Accession: NZ_CP032391 Location: 1..146176 Organism: Salmonella enterica subsp. enterica serovar Dublin strain CVM 34981 Replicon: plasmid p34981_1
Accession: NZ_CP032391 Location: 1..146176 Organism: Salmonella enterica subsp. enterica serovar Dublin strain CVM 34981 Replicon: plasmid p34981_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D5F99_RS24795 () | 401..1582 | + | 1182 | WP_119768174.1 | ParB/RepB/Spo0J family partition protein | - |
| D5F99_RS24800 () | 1631..1903 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| D5F99_RS24805 () | 1956..2591 | - | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| D5F99_RS26325 () | 2683..2826 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| D5F99_RS24810 () | 3153..3530 | + | 378 | WP_001125904.1 | hypothetical protein | - |
| D5F99_RS26445 () | 3523..3804 | + | 282 | WP_000044823.1 | hypothetical protein | - |
| D5F99_RS24820 () | 3779..4453 | + | 675 | WP_000344149.1 | hypothetical protein | - |
| D5F99_RS24825 () | 4521..4952 | + | 432 | WP_001326170.1 | hypothetical protein | - |
| D5F99_RS24830 () | 4958..5269 | + | 312 | WP_001447539.1 | hypothetical protein | - |
| D5F99_RS24835 () | 5278..5778 | + | 501 | WP_000647188.1 | hypothetical protein | - |
| D5F99_RS24840 () | 5782..7209 | + | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| D5F99_RS24845 () | 7209..7865 | + | 657 | WP_000268552.1 | hypothetical protein | - |
| D5F99_RS24850 () | 7921..8538 | + | 618 | WP_000464630.1 | hypothetical protein | - |
| D5F99_RS24860 () | 8750..9049 | + | 300 | WP_001326171.1 | hypothetical protein | - |
| D5F99_RS24865 () | 9140..9628 | - | 489 | WP_000467110.1 | hypothetical protein | - |
| D5F99_RS24870 () | 9643..11835 | - | 2193 | WP_000366823.1 | DNA topoisomerase 3 | - |
| D5F99_RS24875 () | 11835..12068 | - | 234 | WP_001191890.1 | hypothetical protein | - |
| D5F99_RS24880 () | 12050..12667 | - | 618 | WP_001249395.1 | hypothetical protein | - |
| D5F99_RS24885 () | 12835..15807 | + | 2973 | WP_001326173.1 | TraI domain-containing protein | - |
| D5F99_RS24890 () | 15804..17669 | + | 1866 | WP_000178857.1 | conjugative transfer system coupling protein TraD | - |
| D5F99_RS24895 () | 17680..18264 | + | 585 | WP_000332868.1 | hypothetical protein | - |
| D5F99_RS24900 () | 18221..18850 | + | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
| D5F99_RS24905 () | 18860..19306 | + | 447 | WP_000122507.1 | hypothetical protein | - |
| D5F99_RS24910 () | 19316..19693 | + | 378 | WP_000869297.1 | hypothetical protein | - |
| D5F99_RS24915 () | 19693..20355 | + | 663 | WP_001231464.1 | hypothetical protein | - |
| D5F99_RS24920 () | 20679..21056 | + | 378 | WP_001326174.1 | hypothetical protein | - |
| D5F99_RS24925 () | 21201..21482 | + | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| D5F99_RS24930 () | 21479..22105 | + | 627 | WP_001049717.1 | hypothetical protein | - |
| D5F99_RS24935 () | 22089..23006 | + | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| D5F99_RS24940 () | 23006..24319 | + | 1314 | WP_024131605.1 | conjugal transfer protein TraB | - |
| D5F99_RS24945 () | 24316..24894 | + | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| D5F99_RS24950 () | 24898..25290 | + | 393 | WP_000479535.1 | hypothetical protein | - |
| D5F99_RS24955 () | 25575..26837 | + | 1263 | WP_000608644.1 | IS1380-like element ISEc9 family transposase | - |
| D5F99_RS24960 () | 27161..28306 | + | 1146 | WP_000976514.1 | class C beta-lactamase CMY-2 | - |
| D5F99_RS24965 () | 28400..28933 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| D5F99_RS24970 () | 28930..29247 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| D5F99_RS24980 () | 29975..35461 | + | 5487 | WP_000606835.1 | DUF4165 domain-containing protein | - |
| D5F99_RS24985 () | 35610..36317 | + | 708 | WP_001259346.1 | DsbC family protein | - |
| D5F99_RS24990 () | 36314..38761 | + | 2448 | WP_000637384.1 | type IV secretion system protein TraC | - |
| D5F99_RS24995 () | 38776..39093 | + | 318 | WP_000351984.1 | hypothetical protein | - |
| D5F99_RS25000 () | 39090..39620 | + | 531 | WP_001010740.1 | S26 family signal peptidase | - |
| D5F99_RS25005 () | 39583..40848 | + | 1266 | WP_001447719.1 | conjugal transfer protein TraW | - |
| D5F99_RS25010 () | 40845..41516 | + | 672 | WP_000575345.1 | EAL domain-containing protein | - |
| D5F99_RS25015 () | 41513..42520 | + | 1008 | WP_000983282.1 | TraU family protein | - |
| D5F99_RS25020 () | 42624..45431 | + | 2808 | WP_001447718.1 | conjugal transfer mating pair stabilization protein TraN | - |
| D5F99_RS25025 () | 45470..46330 | - | 861 | WP_000709517.1 | hypothetical protein | - |
| D5F99_RS25030 () | 46453..47094 | - | 642 | WP_000796664.1 | hypothetical protein | - |
| D5F99_RS25035 () | 47389..47709 | + | 321 | WP_000547566.1 | hypothetical protein | - |
| D5F99_RS25040 () | 48013..48198 | + | 186 | WP_001186917.1 | hypothetical protein | - |
| D5F99_RS25045 () | 48418..49386 | + | 969 | WP_000085160.1 | CbbQ/NirQ/NorQ C-terminal domain-containing protein | - |
| D5F99_RS25050 () | 49397..50305 | + | 909 | WP_000739139.1 | hypothetical protein | - |
| D5F99_RS25055 () | 50366..50896 | + | 531 | WP_000987165.1 | single-stranded DNA-binding protein | - |
| D5F99_RS25060 () | 50991..51980 | + | 990 | WP_001282585.1 | phage recombination protein Bet | - |
| D5F99_RS25065 () | 52043..53053 | + | 1011 | WP_000706865.1 | YqaJ viral recombinase family protein | - |
| D5F99_RS25075 () | 53253..54530 | + | 1278 | WP_000170087.1 | DUF3150 domain-containing protein | - |
| D5F99_RS25080 () | 54615..56411 | + | 1797 | WP_000039319.1 | VWA domain-containing protein | - |
| D5F99_RS25085 () | 56473..56808 | + | 336 | WP_001447572.1 | hypothetical protein | - |
| D5F99_RS25090 () | 57073..57612 | + | 540 | WP_000018872.1 | hypothetical protein | - |
| D5F99_RS25095 () | 57703..58203 | + | 501 | WP_000793769.1 | hypothetical protein | - |
| D5F99_RS25100 () | 58277..59161 | + | 885 | WP_000477209.1 | hypothetical protein | - |
| D5F99_RS25105 () | 59227..59451 | + | 225 | WP_001102700.1 | 2Fe-2S ferredoxin-like protein | - |
| D5F99_RS25110 () | 59513..59902 | + | 390 | WP_000026577.1 | hypothetical protein | - |
| D5F99_RS25115 () | 59892..60344 | + | 453 | WP_001176699.1 | hypothetical protein | - |
| D5F99_RS25125 () | 60682..60873 | + | 192 | WP_000651508.1 | hypothetical protein | - |
| D5F99_RS25130 () | 60918..61295 | + | 378 | WP_001337696.1 | hypothetical protein | - |
| D5F99_RS25135 () | 61487..61831 | + | 345 | WP_000209093.1 | hypothetical protein | - |
| D5F99_RS25140 () | 61909..62211 | + | 303 | WP_000410925.1 | hypothetical protein | - |
| D5F99_RS25145 () | 62289..63914 | + | 1626 | WP_000201432.1 | DNA cytosine methyltransferase | - |
| D5F99_RS25150 () | 63975..64406 | + | 432 | WP_000687894.1 | hypothetical protein | - |
| D5F99_RS25155 () | 64480..65034 | + | 555 | WP_001093867.1 | hypothetical protein | - |
| D5F99_RS25160 () | 65267..65653 | + | 387 | WP_000042274.1 | hypothetical protein | - |
| D5F99_RS25165 () | 65741..68194 | + | 2454 | WP_001187969.1 | phosphoadenosine phosphosulfate reductase | - |
| D5F99_RS25170 () | 68396..68599 | + | 204 | WP_000050847.1 | hypothetical protein | - |
| D5F99_RS25175 () | 68671..69276 | + | 606 | WP_000071870.1 | 5'-deoxynucleotidase | - |
| D5F99_RS25180 () | 69269..69538 | + | 270 | WP_000184110.1 | hypothetical protein | - |
| D5F99_RS25185 () | 69552..69770 | + | 219 | WP_000260293.1 | hypothetical protein | - |
| D5F99_RS25190 () | 69844..70401 | + | 558 | WP_000064432.1 | hypothetical protein | - |
| D5F99_RS25195 () | 70476..71327 | + | 852 | WP_000595210.1 | hypothetical protein | - |
| D5F99_RS25200 () | 71786..72172 | + | 387 | WP_001077336.1 | hypothetical protein | - |
| D5F99_RS25205 () | 72350..74077 | + | 1728 | WP_000122922.1 | toprim domain-containing protein | - |
| D5F99_RS25210 () | 74064..74342 | + | 279 | WP_000268337.1 | hypothetical protein | - |
| D5F99_RS25215 () | 74415..74636 | + | 222 | WP_000714163.1 | hypothetical protein | - |
| D5F99_RS25220 () | 74818..75822 | - | 1005 | WP_000427619.1 | IS110-like element IS5075 family transposase | - |
| D5F99_RS25225 () | 75901..78873 | - | 2973 | WP_001138073.1 | Tn3 family transposase | - |
| D5F99_RS25230 () | 78876..79127 | - | 252 | WP_072209121.1 | helix-turn-helix domain-containing protein | - |
| D5F99_RS25240 () | 79220..79924 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| D5F99_RS25245 () | 80062..80298 | - | 237 | WP_001087810.1 | broad-spectrum mercury transporter MerE | - |
| D5F99_RS25250 () | 80295..80660 | - | 366 | WP_000995361.1 | mercury resistance co-regulator MerD | - |
| D5F99_RS25255 () | 80772..81410 | - | 639 | WP_000761850.1 | organomercurial lyase MerB | - |
| D5F99_RS25260 () | 81425..83110 | - | 1686 | WP_000149288.1 | mercury(II) reductase | - |
| D5F99_RS25265 () | 83182..83457 | - | 276 | WP_000732290.1 | mercury resistance system periplasmic binding protein MerP | - |
| D5F99_RS25270 () | 83473..83823 | - | 351 | WP_001294666.1 | mercuric transport protein MerT | - |
| D5F99_RS25275 () | 83895..84329 | + | 435 | WP_000414383.1 | mercury resistance transcriptional regulator MerR | - |
| D5F99_RS25280 () | 84429..85433 | + | 1005 | WP_000427623.1 | IS110-like element IS4321 family transposase | - |
| D5F99_RS25285 () | 85710..85829 | + | 120 | Protein_95 | permease | - |
| D5F99_RS26345 () | 85839..85955 | + | 117 | WP_000338626.1 | hypothetical protein | - |
| D5F99_RS25290 () | 86076..86450 | + | 375 | WP_000868820.1 | hypothetical protein | - |
| D5F99_RS25295 () | 86564..87289 | + | 726 | WP_000988731.1 | hypothetical protein | - |
| D5F99_RS25305 () | 87422..91675 | + | 4254 | WP_001257735.1 | RHS domain-containing protein | - |
| D5F99_RS25310 () | 91647..92087 | + | 441 | WP_001326394.1 | hypothetical protein | - |
| D5F99_RS25315 () | 92258..92710 | + | 453 | Protein_101 | hypothetical protein | - |
| D5F99_RS25320 () | 92726..93328 | - | 603 | WP_000278322.1 | hypothetical protein | - |
| D5F99_RS25325 () | 93598..93879 | + | 282 | WP_000575657.1 | hypothetical protein | - |
| D5F99_RS25335 () | 94178..94714 | + | 537 | WP_000949433.1 | hypothetical protein | - |
| D5F99_RS25340 () | 94717..95727 | + | 1011 | WP_000543934.1 | tyrosine-type recombinase/integrase | - |
| D5F99_RS25345 () | 95732..96601 | + | 870 | WP_000997323.1 | 3'-5' exonuclease | - |
| D5F99_RS25350 () | 96598..97089 | + | 492 | WP_000139717.1 | hypothetical protein | - |
| D5F99_RS26450 () | 97135..97350 | - | 216 | WP_205570387.1 | hypothetical protein | - |
| D5F99_RS25360 () | 97476..98351 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| D5F99_RS25365 () | 98513..99553 | + | 1041 | WP_000101568.1 | DNA-binding protein | - |
| D5F99_RS25375 () | 99840..101351 | + | 1512 | WP_000811656.1 | UvrD-helicase domain-containing protein | - |
| D5F99_RS25380 () | 101462..102502 | + | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| D5F99_RS25385 () | 102504..103937 | + | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| D5F99_RS25390 () | 103950..107564 | + | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| D5F99_RS25395 () | 107602..107964 | - | 363 | WP_000683483.1 | hypothetical protein | - |
| D5F99_RS25400 () | 108680..108952 | + | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| D5F99_RS25405 () | 108952..109485 | + | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| D5F99_RS25410 () | 109496..110104 | + | 609 | WP_000891157.1 | hypothetical protein | - |
| D5F99_RS25415 () | 110101..110652 | + | 552 | WP_001020646.1 | hypothetical protein | - |
| D5F99_RS25420 () | 110712..111131 | - | 420 | WP_000651490.1 | H-NS histone family protein | - |
| D5F99_RS25425 () | 111133..111426 | - | 294 | WP_000919078.1 | hypothetical protein | - |
| D5F99_RS25430 () | 111443..112426 | - | 984 | WP_000077458.1 | ParM/StbA family protein | - |
| D5F99_RS25435 () | 112925..113464 | + | 540 | WP_001447712.1 | hypothetical protein | - |
| D5F99_RS25440 () | 113469..113756 | + | 288 | WP_000127321.1 | hypothetical protein | - |
| D5F99_RS25445 () | 113741..114841 | + | 1101 | WP_000350011.1 | plasmid replication protein | - |
| D5F99_RS25460 () | 115878..116312 | - | 435 | WP_000883925.1 | hypothetical protein | - |
| D5F99_RS25465 () | 116330..117445 | - | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| D5F99_RS25470 () | 117714..118322 | + | 609 | WP_000849071.1 | hypothetical protein | - |
| D5F99_RS25475 () | 118327..118848 | + | 522 | WP_000393785.1 | hypothetical protein | - |
| D5F99_RS25480 () | 118851..119372 | + | 522 | WP_000805800.1 | hypothetical protein | - |
| D5F99_RS25485 () | 119469..119942 | + | 474 | WP_000057877.1 | hypothetical protein | - |
| D5F99_RS25490 () | 119953..120246 | + | 294 | WP_001370730.1 | hypothetical protein | - |
| D5F99_RS25495 () | 120251..121105 | + | 855 | WP_000539392.1 | hypothetical protein | - |
| D5F99_RS25500 () | 121105..122064 | + | 960 | WP_000829616.1 | S49 family peptidase | - |
| D5F99_RS25505 () | 122080..122940 | + | 861 | WP_000139698.1 | DsbA family protein | - |
| D5F99_RS25510 () | 122974..123402 | + | 429 | WP_000591074.1 | hypothetical protein | - |
| D5F99_RS25515 () | 123459..123818 | + | 360 | WP_000422768.1 | hypothetical protein | - |
| D5F99_RS25520 () | 123818..124264 | + | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| D5F99_RS25525 () | 124261..124779 | + | 519 | WP_000210756.1 | nitrite reductase | - |
| D5F99_RS25530 () | 124779..125009 | + | 231 | WP_000972663.1 | hypothetical protein | - |
| D5F99_RS25535 () | 124996..125853 | + | 858 | WP_001167032.1 | hypothetical protein | - |
| D5F99_RS25545 () | 126084..126611 | + | 528 | WP_001236377.1 | thermonuclease family protein | - |
| D5F99_RS25550 () | 126669..126941 | + | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| D5F99_RS25555 () | 127029..127322 | + | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| D5F99_RS25560 () | 127349..127651 | - | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| D5F99_RS25565 () | 127656..128006 | - | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D5F99_RS25570 () | 128169..128717 | + | 549 | WP_001061574.1 | transcriptional regulator | - |
| D5F99_RS25580 () | 129058..129252 | + | 195 | WP_000343597.1 | hypothetical protein | - |
| D5F99_RS25585 () | 129263..129634 | + | 372 | WP_000516916.1 | hypothetical protein | - |
| D5F99_RS25590 () | 129627..130097 | + | 471 | WP_001281821.1 | hypothetical protein | - |
| D5F99_RS25595 () | 130112..130447 | - | 336 | WP_000683476.1 | hypothetical protein | - |
| D5F99_RS25600 () | 130544..131032 | + | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| D5F99_RS25605 () | 131035..131532 | + | 498 | WP_000062185.1 | hypothetical protein | - |
| D5F99_RS25610 () | 131747..132451 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| D5F99_RS25615 () | 132516..132695 | - | 180 | Protein_155 | helix-turn-helix transcriptional regulator | - |
| D5F99_RS25620 () | 133002..133706 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| D5F99_RS26370 () | 133712..133852 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| D5F99_RS25630 () | 134338..135075 | + | 738 | WP_001366550.1 | recombinase family protein | - |
| D5F99_RS25635 () | 135072..135296 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| D5F99_RS25640 () | 135507..137000 | + | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| D5F99_RS26455 () | 137469..137915 | + | 447 | Protein_161 | DUF3363 domain-containing protein | - |
| D5F99_RS25650 () | 138132..139346 | + | 1215 | WP_021038045.1 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| D5F99_RS25655 () | 139374..139679 | + | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| D5F99_RS25660 () | 139791..139979 | + | 189 | Protein_164 | IS91 family transposase | - |
| D5F99_RS25665 () | 139946..141145 | - | 1200 | WP_000804063.1 | tetracycline efflux MFS transporter Tet(A) | - |
| D5F99_RS25670 () | 141251..141901 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| D5F99_RS25675 () | 141933..142175 | - | 243 | WP_000844627.1 | transposase | - |
| D5F99_RS25685 () | 142481..143317 | - | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| D5F99_RS25690 () | 143317..144120 | - | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| D5F99_RS25695 () | 144181..144996 | - | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| D5F99_RS25705 () | 145303..145614 | + | 312 | WP_000338945.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|