MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 103514 bp
Accession: NZ_CP032385 Location: 1..103514 Organism: Salmonella enterica subsp. enterica serovar Dublin strain CVM N53043 Replicon: plasmid pN53043_1
Accession: NZ_CP032385 Location: 1..103514 Organism: Salmonella enterica subsp. enterica serovar Dublin strain CVM N53043 Replicon: plasmid pN53043_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D5F97_RS24940 () | 412..1452 | - | 1041 | WP_000101568.1 | DNA-binding protein | - |
| D5F97_RS24945 () | 1606..2481 | - | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| D5F97_RS24950 () | 2808..3299 | - | 492 | WP_000139717.1 | hypothetical protein | - |
| D5F97_RS24955 () | 3296..4165 | - | 870 | WP_012728230.1 | 3'-5' exonuclease | - |
| D5F97_RS24960 () | 4170..5180 | - | 1011 | WP_000543934.1 | tyrosine-type recombinase/integrase | - |
| D5F97_RS24965 () | 5183..5719 | - | 537 | WP_000949433.1 | hypothetical protein | - |
| D5F97_RS24975 () | 6018..6299 | - | 282 | WP_000575657.1 | hypothetical protein | - |
| D5F97_RS24980 () | 6569..7171 | + | 603 | WP_000278322.1 | hypothetical protein | - |
| D5F97_RS24985 () | 7187..7639 | - | 453 | Protein_9 | hypothetical protein | - |
| D5F97_RS24990 () | 7810..8250 | - | 441 | WP_001326394.1 | hypothetical protein | - |
| D5F97_RS24995 () | 8222..12475 | - | 4254 | WP_001257735.1 | RHS domain-containing protein | - |
| D5F97_RS25005 () | 12608..13333 | - | 726 | WP_000988731.1 | hypothetical protein | - |
| D5F97_RS25010 () | 13447..13821 | - | 375 | WP_000868820.1 | hypothetical protein | - |
| D5F97_RS26280 () | 13942..14058 | - | 117 | WP_000338626.1 | hypothetical protein | - |
| D5F97_RS25015 () | 14068..14187 | - | 120 | Protein_15 | permease | - |
| D5F97_RS25020 () | 14464..15468 | - | 1005 | WP_000427623.1 | IS110-like element IS4321 family transposase | - |
| D5F97_RS25025 () | 15568..16002 | - | 435 | WP_000414383.1 | mercury resistance transcriptional regulator MerR | - |
| D5F97_RS25030 () | 16074..16424 | + | 351 | WP_001294666.1 | mercuric transport protein MerT | - |
| D5F97_RS25035 () | 16440..16715 | + | 276 | WP_000732290.1 | mercury resistance system periplasmic binding protein MerP | - |
| D5F97_RS25040 () | 16787..18472 | + | 1686 | WP_000149288.1 | mercury(II) reductase | - |
| D5F97_RS25045 () | 18487..19125 | + | 639 | WP_000761850.1 | organomercurial lyase MerB | - |
| D5F97_RS25050 () | 19237..19602 | + | 366 | WP_000995361.1 | mercury resistance co-regulator MerD | - |
| D5F97_RS25055 () | 19599..19835 | + | 237 | WP_001087810.1 | broad-spectrum mercury transporter MerE | - |
| D5F97_RS25060 () | 19832..20821 | + | 990 | WP_001276635.1 | DUF3330 domain-containing protein | - |
| D5F97_RS25065 () | 21031..21735 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| D5F97_RS25075 () | 21775..22611 | + | 837 | WP_012728227.1 | TEM family class A beta-lactamase | - |
| D5F97_RS25080 () | 22772..23269 | + | 498 | Protein_27 | mercuric reductase | - |
| D5F97_RS25085 () | 23287..23649 | + | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| D5F97_RS25090 () | 23646..23882 | + | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| D5F97_RS25095 () | 23918..24586 | + | 669 | WP_001300294.1 | EAL domain-containing protein | - |
| D5F97_RS25105 () | 24661..25911 | + | 1251 | Protein_31 | transposase | - |
| D5F97_RS25110 () | 25976..26680 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| D5F97_RS25115 () | 26870..27685 | - | 816 | WP_000018329.1 | aminoglycoside O-phosphotransferase APH(3')-Ia | - |
| D5F97_RS25120 () | 27838..28542 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| D5F97_RS25125 () | 28599..29069 | - | 471 | Protein_35 | lipocalin family protein | - |
| D5F97_RS25130 () | 29163..30308 | - | 1146 | WP_000976514.1 | class C beta-lactamase CMY-2 | - |
| D5F97_RS25135 () | 30632..31894 | - | 1263 | WP_000608644.1 | IS1380-like element ISEc9 family transposase | - |
| D5F97_RS25140 () | 32179..32571 | - | 393 | WP_000479535.1 | hypothetical protein | - |
| D5F97_RS25145 () | 32575..33153 | - | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| D5F97_RS25150 () | 33150..34463 | - | 1314 | WP_024131605.1 | conjugal transfer protein TraB | - |
| D5F97_RS25155 () | 34463..35380 | - | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| D5F97_RS25160 () | 35364..35990 | - | 627 | WP_001049717.1 | hypothetical protein | - |
| D5F97_RS25165 () | 35987..36268 | - | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| D5F97_RS25170 () | 36413..36790 | - | 378 | WP_001326174.1 | hypothetical protein | - |
| D5F97_RS25175 () | 37114..37776 | - | 663 | WP_001231464.1 | hypothetical protein | - |
| D5F97_RS25180 () | 37776..38153 | - | 378 | WP_000869297.1 | hypothetical protein | - |
| D5F97_RS25185 () | 38163..38609 | - | 447 | WP_000122507.1 | hypothetical protein | - |
| D5F97_RS25190 () | 38619..39248 | - | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
| D5F97_RS25195 () | 39205..39789 | - | 585 | WP_000332868.1 | hypothetical protein | - |
| D5F97_RS25200 () | 39800..41665 | - | 1866 | WP_077779971.1 | conjugative transfer system coupling protein TraD | - |
| D5F97_RS25205 () | 41662..44634 | - | 2973 | WP_001326173.1 | TraI domain-containing protein | - |
| D5F97_RS25210 () | 44802..45419 | + | 618 | WP_001249395.1 | hypothetical protein | - |
| D5F97_RS25215 () | 45401..45634 | + | 234 | WP_001191890.1 | hypothetical protein | - |
| D5F97_RS25220 () | 45634..47826 | + | 2193 | WP_000366823.1 | DNA topoisomerase 3 | - |
| D5F97_RS25225 () | 47841..48329 | + | 489 | WP_000467110.1 | hypothetical protein | - |
| D5F97_RS25230 () | 48420..48719 | - | 300 | WP_001326171.1 | hypothetical protein | - |
| D5F97_RS25240 () | 48931..49548 | - | 618 | WP_000464630.1 | hypothetical protein | - |
| D5F97_RS25245 () | 49604..50260 | - | 657 | WP_000268552.1 | hypothetical protein | - |
| D5F97_RS25250 () | 50260..51687 | - | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| D5F97_RS25255 () | 51691..52191 | - | 501 | WP_000647188.1 | hypothetical protein | - |
| D5F97_RS25260 () | 52200..52511 | - | 312 | WP_001447539.1 | hypothetical protein | - |
| D5F97_RS25265 () | 52517..52948 | - | 432 | WP_001326170.1 | hypothetical protein | - |
| D5F97_RS25270 () | 53016..53690 | - | 675 | WP_000344149.1 | hypothetical protein | - |
| D5F97_RS26400 () | 53665..53946 | - | 282 | WP_000044823.1 | hypothetical protein | - |
| D5F97_RS25280 () | 53939..54316 | - | 378 | WP_001125904.1 | hypothetical protein | - |
| D5F97_RS26295 () | 54643..54786 | + | 144 | WP_000939033.1 | hypothetical protein | - |
| D5F97_RS25285 () | 54878..55513 | + | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| D5F97_RS25290 () | 55566..55838 | - | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| D5F97_RS25295 () | 55887..57068 | - | 1182 | WP_001207227.1 | ParB/RepB/Spo0J family partition protein | - |
| D5F97_RS25300 () | 57072..57857 | - | 786 | WP_001151304.1 | ParA family protein | - |
| D5F97_RS25305 () | 58031..58342 | - | 312 | WP_000338945.1 | hypothetical protein | - |
| D5F97_RS25315 () | 58649..59464 | + | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| D5F97_RS25320 () | 59525..60328 | + | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| D5F97_RS25325 () | 60328..61164 | + | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| D5F97_RS25335 () | 61470..61712 | + | 243 | WP_000844627.1 | transposase | - |
| D5F97_RS25340 () | 61744..62394 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| D5F97_RS25345 () | 62500..63699 | + | 1200 | WP_000804063.1 | tetracycline efflux MFS transporter Tet(A) | - |
| D5F97_RS25350 () | 63666..63854 | - | 189 | Protein_78 | IS91 family transposase | - |
| D5F97_RS25355 () | 63966..64271 | - | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| D5F97_RS25360 () | 64299..65513 | - | 1215 | WP_012728216.1 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| D5F97_RS26405 () | 65730..66176 | - | 447 | Protein_81 | DUF3363 domain-containing protein | - |
| D5F97_RS25370 () | 66645..68138 | - | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| D5F97_RS25375 () | 68349..68573 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| D5F97_RS25380 () | 68570..69307 | - | 738 | WP_001366550.1 | recombinase family protein | - |
| D5F97_RS25390 () | 69773..70477 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| D5F97_RS25395 () | 70784..70963 | + | 180 | Protein_86 | helix-turn-helix transcriptional regulator | - |
| D5F97_RS25400 () | 71028..71732 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| D5F97_RS25405 () | 71947..72444 | - | 498 | WP_000062185.1 | hypothetical protein | - |
| D5F97_RS25410 () | 72447..72935 | - | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| D5F97_RS25415 () | 73032..73367 | + | 336 | WP_000683476.1 | hypothetical protein | - |
| D5F97_RS25420 () | 73382..73852 | - | 471 | WP_001281821.1 | hypothetical protein | - |
| D5F97_RS25425 () | 73845..74216 | - | 372 | WP_000516916.1 | hypothetical protein | - |
| D5F97_RS25430 () | 74227..74421 | - | 195 | WP_000343597.1 | hypothetical protein | - |
| D5F97_RS25440 () | 74762..75310 | - | 549 | WP_001061574.1 | transcriptional regulator | - |
| D5F97_RS25445 () | 75473..75823 | + | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D5F97_RS25450 () | 75828..76130 | + | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| D5F97_RS25455 () | 76157..76450 | - | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| D5F97_RS25460 () | 76538..76810 | - | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| D5F97_RS25465 () | 76868..77395 | - | 528 | WP_001236377.1 | thermonuclease family protein | - |
| D5F97_RS25475 () | 77626..78483 | - | 858 | WP_001167032.1 | hypothetical protein | - |
| D5F97_RS25480 () | 78470..78700 | - | 231 | WP_000972663.1 | hypothetical protein | - |
| D5F97_RS25485 () | 78700..79218 | - | 519 | WP_000210756.1 | nitrite reductase | - |
| D5F97_RS25490 () | 79215..79661 | - | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| D5F97_RS25495 () | 79661..80020 | - | 360 | WP_000422768.1 | hypothetical protein | - |
| D5F97_RS25500 () | 80077..80505 | - | 429 | WP_000591074.1 | hypothetical protein | - |
| D5F97_RS25505 () | 80539..81399 | - | 861 | WP_000139698.1 | DsbA family protein | - |
| D5F97_RS25510 () | 81415..82374 | - | 960 | WP_000829616.1 | S49 family peptidase | - |
| D5F97_RS25515 () | 82374..83228 | - | 855 | WP_000539392.1 | hypothetical protein | - |
| D5F97_RS25520 () | 83233..83526 | - | 294 | WP_001370730.1 | hypothetical protein | - |
| D5F97_RS25525 () | 83537..84010 | - | 474 | WP_000057877.1 | hypothetical protein | - |
| D5F97_RS25530 () | 84107..84628 | - | 522 | WP_000805800.1 | hypothetical protein | - |
| D5F97_RS25535 () | 84631..85152 | - | 522 | WP_000393785.1 | hypothetical protein | - |
| D5F97_RS25540 () | 85157..85765 | - | 609 | WP_000849071.1 | hypothetical protein | - |
| D5F97_RS25545 () | 86034..87149 | + | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| D5F97_RS25550 () | 87167..87601 | + | 435 | WP_000883925.1 | hypothetical protein | - |
| D5F97_RS25565 () | 88638..89738 | - | 1101 | WP_000350011.1 | plasmid replication protein | - |
| D5F97_RS25570 () | 89723..90010 | - | 288 | WP_000127321.1 | hypothetical protein | - |
| D5F97_RS25575 () | 90015..90554 | - | 540 | WP_001447712.1 | hypothetical protein | - |
| D5F97_RS25580 () | 91053..92036 | + | 984 | WP_000077458.1 | ParM/StbA family protein | - |
| D5F97_RS25585 () | 92053..92346 | + | 294 | WP_000919078.1 | hypothetical protein | - |
| D5F97_RS25590 () | 92348..92767 | + | 420 | WP_000651490.1 | H-NS histone family protein | - |
| D5F97_RS25595 () | 92827..93378 | - | 552 | WP_001020646.1 | hypothetical protein | - |
| D5F97_RS25600 () | 93375..93983 | - | 609 | WP_000891157.1 | hypothetical protein | - |
| D5F97_RS25605 () | 93994..94527 | - | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| D5F97_RS25610 () | 94527..94799 | - | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| D5F97_RS25615 () | 95515..95877 | + | 363 | WP_000683483.1 | hypothetical protein | - |
| D5F97_RS25620 () | 95915..99529 | - | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| D5F97_RS25625 () | 99542..100975 | - | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| D5F97_RS25630 () | 100977..102017 | - | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|