MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 92687 bp
Accession: NZ_CP032312 Location: 757335..850021 Organism: Pannonibacter phragmitetus BB Replicon: chromosome
Accession: NZ_CP032312 Location: 757335..850021 Organism: Pannonibacter phragmitetus BB Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P874_RS03550 () | 752455..754266 | - | 1812 | WP_050472183.1 | membrane protein insertase YidC | - |
| P874_RS03555 () | 754276..754707 | - | 432 | WP_050472182.1 | ribonuclease P protein component | - |
| P874_RS03560 () | 754773..754907 | - | 135 | WP_026355454.1 | 50S ribosomal protein L34 | - |
| P874_RS03565 () | 755297..756814 | + | 1518 | WP_050472181.1 | HAMP domain-containing histidine kinase | - |
| P874_RS03575 () | 757437..759203 | - | 1767 | WP_094463847.1 | sulfate permease | - |
| P874_RS03580 () | 759228..759554 | - | 327 | WP_162936300.1 | TIGR01244 family phosphatase | - |
| P874_RS03585 () | 759584..760033 | - | 450 | WP_094463849.1 | YeeE/YedE family protein | - |
| P874_RS03590 () | 760033..760461 | - | 429 | WP_094463850.1 | hypothetical protein | - |
| P874_RS03595 () | 760458..760679 | - | 222 | WP_094463851.1 | DUF2892 domain-containing protein | - |
| P874_RS03600 () | 760676..761008 | - | 333 | WP_174235493.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| P874_RS03605 () | 761020..761904 | - | 885 | WP_094463852.1 | MBL fold metallo-hydrolase | - |
| P874_RS03610 () | 762073..763095 | - | 1023 | WP_162936301.1 | hypothetical protein | VF |
| P874_RS03615 () | 763151..764353 | - | 1203 | WP_094463854.1 | MFS transporter | - |
| P874_RS03620 () | 764384..765001 | - | 618 | WP_094463855.1 | L,D-transpeptidase | - |
| P874_RS03625 () | 765205..765867 | + | 663 | WP_094463856.1 | Transcriptional regulatory protein QseB | VF |
| P874_RS03630 () | 765867..767315 | + | 1449 | WP_094463857.1 | sensor histidine kinase N-terminal domain-containing protein | - |
| P874_RS03635 () | 767228..767920 | - | 693 | WP_094463858.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| P874_RS03640 () | 768095..768988 | + | 894 | WP_094463884.1 | AraC family transcriptional regulator | - |
| P874_RS03645 () | 769121..769735 | - | 615 | WP_094463859.1 | L,D-transpeptidase | - |
| P874_RS03650 () | 770083..770619 | + | 537 | WP_094463860.1 | thioredoxin family protein | - |
| P874_RS03655 () | 770634..771257 | + | 624 | WP_094463861.1 | class I SAM-dependent methyltransferase | - |
| P874_RS03660 () | 771334..771936 | + | 603 | WP_094463862.1 | DsbA family protein | - |
| P874_RS03665 () | 771933..773114 | + | 1182 | WP_094463863.1 | L,D-transpeptidase family protein | - |
| P874_RS03670 () | 773111..773383 | + | 273 | WP_162936302.1 | hypothetical protein | - |
| P874_RS03675 () | 773383..774831 | + | 1449 | WP_094463865.1 | bifunctional metallophosphatase/5'-nucleotidase | - |
| P874_RS03680 () | 774844..775656 | - | 813 | WP_094463866.1 | GGDEF domain-containing protein | - |
| P874_RS03685 () | 775805..777877 | - | 2073 | WP_119396586.1 | cadmium-translocating P-type ATPase | - |
| P874_RS03690 () | 777885..778913 | - | 1029 | WP_094463868.1 | c-type cytochrome | - |
| P874_RS03695 () | 778910..780154 | - | 1245 | WP_119396587.1 | Cytochrome c4 | VF |
| P874_RS03700 () | 780151..780771 | - | 621 | WP_094463870.1 | cbb3-type cytochrome c oxidase subunit II | - |
| P874_RS03705 () | 780768..782336 | - | 1569 | WP_094463871.1 | cbb3-type cytochrome c oxidase subunit I | - |
| P874_RS03710 () | 782459..785638 | - | 3180 | WP_094463872.1 | tetrathionate reductase subunit TtrA | - |
| P874_RS03715 () | 785650..786702 | - | 1053 | WP_094463873.1 | polysulfide reductase NrfD | - |
| P874_RS03720 () | 786709..787470 | - | 762 | WP_094463874.1 | 4Fe-4S dicluster domain-containing protein | - |
| P874_RS03725 () | 787832..788446 | - | 615 | WP_094463875.1 | SCO family protein | - |
| P874_RS03730 () | 788530..789162 | - | 633 | WP_094463876.1 | thioredoxin domain-containing protein | - |
| P874_RS03735 () | 789283..790074 | + | 792 | WP_094463877.1 | thiol:disulfide interchange protein DsbG | - |
| P874_RS03740 () | 790183..790929 | + | 747 | WP_094463878.1 | cytochrome c oxidase assembly protein | - |
| P874_RS03745 () | 791169..791849 | + | 681 | WP_094463879.1 | DsbA family protein | - |
| P874_RS03750 () | 791883..793700 | + | 1818 | WP_094463880.1 | protein-disulfide reductase DsbD | - |
| P874_RS03755 () | 793702..794562 | + | 861 | WP_094463881.1 | TlpA family protein disulfide reductase | - |
| P874_RS03760 () | 794711..795682 | + | 972 | WP_094463885.1 | LysR family transcriptional regulator | - |
| P874_RS03765 () | 795691..795921 | - | 231 | WP_094463882.1 | DUF2274 domain-containing protein | - |
| P874_RS03770 () | 795918..797105 | - | 1188 | WP_174235446.1 | Type IV secretion system protein virB10 | VF |
| P874_RS03775 () | 797102..798109 | - | 1008 | WP_090598426.1 | P-type conjugative transfer protein TrbG | - |
| P874_RS03780 () | 798106..798795 | - | 690 | WP_090598423.1 | conjugal transfer protein TrbF | - |
| P874_RS03785 () | 798792..800144 | - | 1353 | WP_119396588.1 | P-type conjugative transfer protein TrbL | - |
| P874_RS03790 () | 800149..800415 | - | 267 | WP_090598498.1 | putative entry exclusion protein TrbK-alt | - |
| P874_RS03795 () | 800438..801223 | - | 786 | WP_090598418.1 | P-type conjugative transfer protein TrbJ | - |
| P874_RS03800 () | 801220..803799 | - | 2580 | WP_090598416.1 | conjugal transfer protein TrbE | - |
| P874_RS03805 () | 803810..804091 | - | 282 | WP_090598413.1 | VirB3 family type IV secretion system protein | - |
| P874_RS03810 () | 804091..804423 | - | 333 | WP_090598411.1 | TrbC/VirB2 family protein | - |
| P874_RS03815 () | 804420..805400 | - | 981 | WP_090598495.1 | Type IV secretion system protein VirB11 | VF |
| P874_RS03820 () | 805947..806681 | - | 735 | WP_094462473.1 | hypothetical protein | - |
| P874_RS03825 () | 806703..807437 | - | 735 | WP_094462472.1 | HupE/UreJ family protein | - |
| P874_RS03830 () | 807496..807873 | - | 378 | WP_094462471.1 | hypothetical protein | - |
| P874_RS03835 () | 807977..808255 | + | 279 | WP_094462515.1 | metal-sensing transcriptional repressor | - |
| P874_RS03840 () | 808268..809590 | + | 1323 | WP_094462470.1 | MFS transporter | - |
| P874_RS03845 () | 809628..810356 | + | 729 | WP_094462469.1 | ABC transporter permease | - |
| P874_RS03850 () | 810467..811285 | + | 819 | WP_094462468.1 | chromate resistance protein | - |
| P874_RS03855 () | 811285..812652 | + | 1368 | WP_119396589.1 | chromate efflux transporter | - |
| P874_RS03860 () | 813485..814684 | - | 1200 | WP_094462466.1 | IS91 family transposase ISMno24 | Transposase |
| P874_RS03865 () | 814688..815596 | - | 909 | WP_094462465.1 | IS91 family transposase ISMno24 | Transposase |
| P874_RS03870 () | 815734..816150 | - | 417 | WP_094462464.1 | ribbon-helix-helix domain-containing protein | - |
| P874_RS03875 () | 816160..818151 | - | 1992 | WP_094462463.1 | Conjugal transfer protein TraG | VF |
| P874_RS03880 () | 818180..819946 | - | 1767 | WP_094462462.1 | VirD2 family relaxase/mobilization nuclease | - |
| P874_RS03885 () | 820194..820961 | - | 768 | WP_094462461.1 | Soluble lytic murein transglycosylase | VF |
| P874_RS03890 () | 820965..821306 | - | 342 | WP_094462460.1 | DUF736 domain-containing protein | - |
| P874_RS03895 () | 821343..821900 | - | 558 | WP_094462459.1 | S26 family signal peptidase | - |
| P874_RS03900 () | 821897..822400 | - | 504 | WP_094462458.1 | DUF2840 domain-containing protein | - |
| P874_RS03905 () | 822397..823461 | - | 1065 | WP_094462457.1 | replication initiator protein A | - |
| P874_RS03910 () | 823471..823752 | - | 282 | WP_094462456.1 | helix-turn-helix domain-containing protein | - |
| P874_RS03915 () | 823930..824304 | - | 375 | WP_094462455.1 | DUF2285 domain-containing protein | - |
| P874_RS03920 () | 824450..824701 | - | 252 | WP_094462454.1 | hypothetical protein | - |
| P874_RS03930 () | 825194..825445 | - | 252 | WP_094462452.1 | hypothetical protein | - |
| P874_RS25115 () | 825597..825764 | - | 168 | WP_162936303.1 | hypothetical protein | - |
| P874_RS03935 () | 826162..826608 | + | 447 | WP_094462451.1 | hypothetical protein | - |
| P874_RS03940 () | 826649..827086 | - | 438 | WP_094462450.1 | PIN domain-containing protein | Toxin Detail |
| P874_RS03945 () | 827083..827310 | - | 228 | WP_094462449.1 | CopG family transcriptional regulator | Antitoxin Detail |
| P874_RS03950 () | 827418..827819 | - | 402 | WP_094462448.1 | Single-stranded DNA-binding protein | VF |
| P874_RS03955 () | 828734..829105 | - | 372 | WP_094462447.1 | hypothetical protein | - |
| P874_RS03960 () | 829555..829971 | - | 417 | WP_094462446.1 | hypothetical protein | - |
| P874_RS03965 () | 830139..831074 | - | 936 | WP_094462514.1 | DUF2493 domain-containing protein | - |
| P874_RS03970 () | 831388..832443 | - | 1056 | WP_094462445.1 | toprim domain-containing protein | - |
| P874_RS03975 () | 832443..836777 | - | 4335 | WP_094462444.1 | strawberry notch family protein | - |
| P874_RS03980 () | 836873..837181 | - | 309 | WP_094462443.1 | DUF4326 domain-containing protein | - |
| P874_RS03985 () | 837410..837826 | - | 417 | WP_094462442.1 | hypothetical protein | - |
| P874_RS03990 () | 837900..838094 | - | 195 | WP_094462441.1 | hypothetical protein | - |
| P874_RS03995 () | 838104..838505 | - | 402 | WP_094462440.1 | hypothetical protein | - |
| P874_RS04000 () | 838635..839257 | - | 623 | Protein_791 | hypothetical protein | - |
| P874_RS04005 () | 839387..839656 | - | 270 | WP_094462513.1 | hypothetical protein | - |
| P874_RS04010 () | 839728..840201 | - | 474 | WP_094462439.1 | hypothetical protein | - |
| P874_RS04015 () | 840274..840495 | - | 222 | WP_094462438.1 | hypothetical protein | - |
| P874_RS04020 () | 840558..842699 | - | 2142 | WP_094462437.1 | chromosome partitioning protein ParB | - |
| P874_RS25465 () | 842934..843578 | - | 645 | Protein_796 | hypothetical protein | - |
| P874_RS04030 () | 843578..843946 | - | 369 | WP_094462436.1 | DUF2958 domain-containing protein | - |
| P874_RS04035 () | 843943..844896 | - | 954 | WP_094462435.1 | DUF1738 domain-containing protein | - |
| P874_RS04040 () | 845037..846635 | - | 1599 | WP_208999602.1 | S8 family serine peptidase | - |
| P874_RS04045 () | 847385..848371 | - | 987 | WP_094462433.1 | ATP-dependent zinc metalloprotease FtsH 4 | VF |
| P874_RS04050 () | 848516..849799 | - | 1284 | WP_119396590.1 | hypothetical protein ; Integrase | Integrase |
| P874_RS04055 () | 850135..851085 | + | 951 | WP_050472180.1 | hypothetical protein | - |
| P874_RS04060 () | 851575..852336 | - | 762 | WP_094462512.1 | HpcH/HpaI aldolase/citrate lyase family protein | - |
| P874_RS04065 () | 852386..853168 | - | 783 | WP_094462511.1 | 2-oxo-hepta-3-ene-1,7-dioate hydratase | - |
| P874_RS04070 () | 853176..854069 | - | 894 | WP_094462432.1 | catechol 1,2-dioxygenase | - |
| P874_RS04075 () | 854135..854578 | - | 444 | WP_050472177.1 | type II 3-dehydroquinate dehydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|