MGE detailed information
MGE type: Conjugative plasmid MGE length: 87423 bp
Accession: NZ_CP032260 Location: 1..87423 Organism: Escherichia coli strain AR_0067 Replicon: plasmid unnamed3
Accession: NZ_CP032260 Location: 1..87423 Organism: Escherichia coli strain AR_0067 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM446_RS01225 () | 1137..2261 | - | 1125 | WP_000152384.1 | DsbC family protein | - |
| AM446_RS28450 () | 2258..3583 | - | 1326 | WP_181574513.1 | IncI1-type conjugal transfer protein TrbA | - |
| AM446_RS28455 () | 3921..4067 | + | 147 | WP_001346191.1 | hypothetical protein | - |
| AM446_RS01240 () | 4648..4899 | + | 252 | WP_001081067.1 | hypothetical protein | - |
| AM446_RS28460 () | 4962..5138 | - | 177 | WP_001054907.1 | hypothetical protein | - |
| AM446_RS01245 () | 5288..5755 | - | 468 | WP_000598962.1 | thermonuclease family protein | - |
| AM446_RS01250 () | 5915..6538 | + | 624 | WP_001155248.1 | DNA-binding protein | - |
| AM446_RS01260 () | 6736..6951 | - | 216 | WP_000266544.1 | hypothetical protein | - |
| AM446_RS01265 () | 6955..7323 | - | 369 | WP_001345852.1 | hypothetical protein | - |
| AM446_RS01275 () | 7614..7856 | - | 243 | WP_000650923.1 | hypothetical protein | - |
| AM446_RS01280 () | 8186..8338 | + | 153 | WP_001302699.1 | Hok/Gef family protein | - |
| AM446_RS01285 () | 8476..10062 | - | 1587 | WP_000004560.1 | TnsA endonuclease N-terminal domain-containing protein | - |
| AM446_RS01290 () | 10336..10989 | - | 654 | WP_001402874.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| AM446_RS01295 () | 11077..13242 | - | 2166 | WP_000691807.1 | DotA/TraY family protein | - |
| AM446_RS01300 () | 13317..13886 | - | 570 | WP_000650752.1 | conjugal transfer protein TraX | - |
| AM446_RS01305 () | 13883..15088 | - | 1206 | WP_162897657.1 | conjugal transfer protein TraW | - |
| AM446_RS01310 () | 15046..15666 | - | 621 | WP_000286854.1 | hypothetical protein | - |
| AM446_RS01315 () | 15666..18710 | - | 3045 | WP_001024766.1 | conjugal transfer protein | - |
| AM446_RS01325 () | 19005..19823 | - | 819 | WP_000753550.1 | hypothetical protein | - |
| AM446_RS01330 () | 19738..19989 | - | 252 | WP_001277573.1 | hypothetical protein | - |
| AM446_RS01335 () | 20046..20444 | - | 399 | WP_000088813.1 | hypothetical protein | - |
| AM446_RS01340 () | 20491..21018 | - | 528 | WP_001388619.1 | conjugal transfer protein TraQ | - |
| AM446_RS01345 () | 21018..21731 | - | 714 | WP_000787003.1 | conjugal transfer protein TraP | - |
| AM446_RS01350 () | 21728..23065 | - | 1338 | WP_001272018.1 | conjugal transfer protein TraO | - |
| AM446_RS01355 () | 23069..24043 | - | 975 | WP_000547385.1 | hypothetical protein | VF |
| AM446_RS01360 () | 24054..24749 | - | 696 | WP_001287545.1 | DotI/IcmL family type IV secretion protein | - |
| AM446_RS01365 () | 24761..25111 | - | 351 | WP_001056367.1 | hypothetical protein | - |
| AM446_RS01370 () | 25128..29189 | - | 4062 | WP_000842450.1 | DNA primase | - |
| AM446_RS01375 () | 29253..29543 | - | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| AM446_RS01380 () | 29540..30688 | - | 1149 | WP_000775210.1 | putative protein YggR | VF |
| AM446_RS01385 () | 30672..31508 | - | 837 | WP_000745049.1 | hypothetical protein | VF |
| AM446_RS01390 () | 31505..31963 | - | 459 | WP_001170111.1 | DotD/TraH family lipoprotein | - |
| AM446_RS01395 () | 32067..33269 | - | 1203 | WP_000979993.1 | conjugal transfer protein TraF | - |
| AM446_RS01400 () | 33371..34192 | - | 822 | WP_000845373.1 | hypothetical protein | - |
| AM446_RS01410 () | 34665..36026 | - | 1362 | WP_001168171.1 | hypothetical protein | VF |
| AM446_RS01415 () | 36044..36670 | - | 627 | WP_000939245.1 | prepilin peptidase | - |
| AM446_RS01420 () | 36686..37171 | - | 486 | WP_001080767.1 | hypothetical protein | VF |
| AM446_RS01425 () | 37216..37752 | - | 537 | WP_000111534.1 | hypothetical protein | VF |
| AM446_RS01430 () | 37814..38908 | - | 1095 | WP_000697158.1 | type II secretion system F family protein | - |
| AM446_RS01435 () | 38910..40418 | - | 1509 | WP_032425678.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| AM446_RS01440 () | 40522..40980 | - | 459 | WP_000095885.1 | hypothetical protein | VF |
| AM446_RS01445 () | 40970..42265 | - | 1296 | WP_000129883.1 | type 4b pilus protein PilO2 | - |
| AM446_RS01450 () | 42286..43905 | - | 1620 | WP_001035565.1 | Outer membrane lipoprotein BfpB | VF |
| AM446_RS01455 () | 43937..44374 | - | 438 | WP_000539952.1 | hypothetical protein | VF |
| AM446_RS01460 () | 44378..45448 | - | 1071 | WP_000730430.1 | hypothetical protein | VF |
| AM446_RS01465 () | 45675..46010 | - | 336 | WP_001335624.1 | hypothetical protein | - |
| AM446_RS01470 () | 46126..46443 | - | 318 | WP_001330559.1 | PilI type IV pilus biogenesis protein | - |
| AM446_RS01475 () | 46449..48128 | - | 1680 | WP_119163887.1 | flotillin family protein | - |
| AM446_RS01480 () | 48260..49120 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| AM446_RS01485 () | 49303..49860 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| AM446_RS01490 () | 50024..53029 | + | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| AM446_RS01495 () | 53125..53745 | - | 621 | WP_000176497.1 | DUF1449 family protein | - |
| AM446_RS01505 () | 54012..54674 | - | 663 | WP_000154142.1 | hypothetical protein | - |
| AM446_RS01510 () | 54815..55456 | - | 642 | WP_000335849.1 | transcription termination factor NusG | - |
| AM446_RS01525 () | 56157..57188 | + | 1032 | WP_000907880.1 | replication initiation protein | - |
| AM446_RS01540 () | 58096..58380 | + | 285 | WP_049143442.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| AM446_RS01545 () | 58380..58655 | + | 276 | WP_049143443.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AM446_RS01550 () | 58761..59042 | + | 282 | WP_001105066.1 | hypothetical protein | - |
| AM446_RS28785 () | 59233..59499 | - | 267 | WP_000627831.1 | hypothetical protein | - |
| AM446_RS28790 () | 59499..59681 | - | 183 | Protein_60 | hypothetical protein | - |
| AM446_RS01570 () | 59737..60339 | - | 603 | WP_000517694.1 | hypothetical protein | - |
| AM446_RS01580 () | 60693..62039 | + | 1347 | WP_001132022.1 | hypothetical protein | - |
| AM446_RS28465 () | 62550..62852 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| AM446_RS01595 () | 62849..63475 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| AM446_RS01600 () | 63695..64966 | - | 1272 | WP_000457510.1 | Y-family DNA polymerase | - |
| AM446_RS01605 () | 64966..65403 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| AM446_RS01610 () | 65400..65648 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| AM446_RS01625 () | 66067..66969 | + | 903 | WP_001330417.1 | DUF1281 domain-containing protein | - |
| AM446_RS01630 () | 66966..67278 | + | 313 | Protein_69 | hypothetical protein | - |
| AM446_RS01635 () | 67354..68037 | + | 684 | WP_000086137.1 | DNA methylase | - |
| AM446_RS01640 () | 68038..68259 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| AM446_RS01645 () | 68273..68707 | + | 435 | WP_000274421.1 | DUF1380 family protein | - |
| AM446_RS28795 () | 68752..69522 | + | 771 | WP_185737924.1 | hypothetical protein | - |
| AM446_RS01660 () | 70057..70359 | + | 303 | WP_072106536.1 | antirestriction protein | - |
| AM446_RS01665 () | 70406..70828 | + | 423 | WP_000271688.1 | DUF1380 family protein | - |
| AM446_RS01670 () | 70825..71016 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| AM446_RS01675 () | 71154..71435 | + | 282 | WP_154671919.1 | hypothetical protein | - |
| AM446_RS01685 () | 71788..72315 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| AM446_RS01690 () | 72373..72606 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| AM446_RS01695 () | 72665..74623 | + | 1959 | WP_119163889.1 | ParB/RepB/Spo0J family partition protein | - |
| AM446_RS01700 () | 74678..75112 | + | 435 | WP_001578018.1 | conjugation system SOS inhibitor PsiB | - |
| AM446_RS01705 () | 75109..75828 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| AM446_RS01710 () | 75825..76421 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| AM446_RS01720 () | 76883..77383 | + | 501 | WP_000117631.1 | antirestriction protein ArdA | - |
| AM446_RS01735 () | 78116..78550 | + | 435 | WP_000218862.1 | hypothetical protein | - |
| AM446_RS01740 () | 78643..78909 | + | 267 | WP_001247860.1 | hypothetical protein | - |
| AM446_RS01745 () | 79086..79475 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| AM446_RS01750 () | 79472..80386 | + | 915 | WP_000038334.1 | Recombination-promoting nuclease RpnA | VF |
| AM446_RS01755 () | 80386..80631 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| AM446_RS01760 () | 80662..80913 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| AM446_RS28800 () | 80947..81144 | - | 198 | WP_119163890.1 | hypothetical protein | - |
| AM446_RS01775 () | 81492..82340 | + | 849 | WP_119163891.1 | DUF4942 domain-containing protein | - |
| AM446_RS01780 () | 82426..82761 | - | 336 | WP_000157083.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| AM446_RS01785 () | 82994..83326 | + | 333 | WP_001291057.1 | hypothetical protein | - |
| AM446_RS01790 () | 83338..86058 | + | 2721 | WP_000991407.1 | Protein TraI | Relaxase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|