MGE detailed information
MGE type: Conjugative plasmid MGE length: 162163 bp
Accession: NZ_CP032238 Location: 1..162163 Organism: Escherichia coli strain ECCWS199 Replicon: plasmid pTB221
Accession: NZ_CP032238 Location: 1..162163 Organism: Escherichia coli strain ECCWS199 Replicon: plasmid pTB221
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D3W53_RS24105 () | 201..1301 | + | 1101 | WP_000350011.1 | plasmid replication protein | - |
| D3W53_RS24120 () | 2338..2772 | - | 435 | WP_000883925.1 | hypothetical protein | - |
| D3W53_RS24125 () | 2790..3905 | - | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| D3W53_RS24130 () | 4174..4782 | + | 609 | WP_000849071.1 | hypothetical protein | - |
| D3W53_RS24135 () | 4787..5308 | + | 522 | WP_000393785.1 | hypothetical protein | - |
| D3W53_RS24140 () | 5311..5832 | + | 522 | WP_000805800.1 | hypothetical protein | - |
| D3W53_RS24145 () | 5929..6402 | + | 474 | WP_000057877.1 | hypothetical protein | - |
| D3W53_RS24150 () | 6413..6706 | + | 294 | WP_001370730.1 | hypothetical protein | - |
| D3W53_RS24155 () | 6711..7565 | + | 855 | WP_061602450.1 | hypothetical protein | - |
| D3W53_RS24160 () | 7565..8524 | + | 960 | WP_000829616.1 | S49 family peptidase | - |
| D3W53_RS24165 () | 8540..9400 | + | 861 | WP_000139698.1 | DsbA family protein | - |
| D3W53_RS24170 () | 9434..9862 | + | 429 | WP_000591074.1 | hypothetical protein | - |
| D3W53_RS24175 () | 9919..10278 | + | 360 | WP_000422768.1 | hypothetical protein | - |
| D3W53_RS24180 () | 10278..10724 | + | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| D3W53_RS24185 () | 10721..11239 | + | 519 | WP_000210756.1 | nitrite reductase | - |
| D3W53_RS24190 () | 11239..11469 | + | 231 | WP_000972663.1 | hypothetical protein | - |
| D3W53_RS24195 () | 11456..12313 | + | 858 | WP_001167032.1 | hypothetical protein | - |
| D3W53_RS24200 () | 12339..12527 | + | 189 | WP_001270411.1 | hypothetical protein | - |
| D3W53_RS24205 () | 12544..13071 | + | 528 | WP_001236377.1 | thermonuclease family protein | - |
| D3W53_RS24210 () | 13129..13401 | + | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| D3W53_RS24215 () | 13489..13782 | + | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| D3W53_RS24220 () | 13809..14111 | - | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| D3W53_RS24225 () | 14116..14466 | - | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D3W53_RS24230 () | 14629..15177 | + | 549 | WP_001061574.1 | transcriptional regulator | - |
| D3W53_RS24240 () | 15518..15712 | + | 195 | WP_000343597.1 | hypothetical protein | - |
| D3W53_RS24245 () | 15723..16094 | + | 372 | WP_000516916.1 | hypothetical protein | - |
| D3W53_RS24250 () | 16087..16395 | + | 309 | Protein_27 | hypothetical protein | - |
| D3W53_RS24255 () | 16565..17764 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| D3W53_RS24260 () | 17774..17962 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| D3W53_RS24270 () | 18260..18595 | - | 336 | WP_000683476.1 | hypothetical protein | - |
| D3W53_RS24275 () | 18692..19180 | + | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| D3W53_RS24280 () | 19183..19680 | + | 498 | WP_000062185.1 | hypothetical protein | - |
| D3W53_RS24285 () | 19895..20599 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| D3W53_RS24290 () | 20664..20843 | - | 180 | Protein_34 | winged helix-turn-helix domain-containing protein | - |
| D3W53_RS24295 () | 21150..21854 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| D3W53_RS26435 () | 21860..22000 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| D3W53_RS24305 () | 22486..23443 | + | 958 | Protein_37 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| D3W53_RS24310 () | 23655..25148 | + | 1494 | WP_119173447.1 | IS91 family transposase ISVsa3 | Transposase |
| D3W53_RS26620 () | 25617..26063 | + | 447 | Protein_39 | DUF3363 domain-containing protein | - |
| D3W53_RS24320 () | 26286..27500 | + | 1215 | WP_023300759.1 | Bicyclomycin resistance protein | ARG |
| D3W53_RS24325 () | 27528..27833 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| D3W53_RS24330 () | 27945..28133 | + | 189 | Protein_42 | IS91 family transposase | - |
| D3W53_RS24335 () | 28100..29299 | - | 1200 | WP_032153701.1 | Tetracycline resistance protein, class C | ARG |
| D3W53_RS24340 () | 29405..30055 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| D3W53_RS24345 () | 30087..30329 | - | 243 | WP_000844627.1 | transposase | - |
| D3W53_RS24355 () | 30635..31471 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| D3W53_RS24360 () | 31471..32274 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| D3W53_RS24365 () | 32335..33150 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| D3W53_RS24375 () | 33454..33765 | + | 312 | WP_000338945.1 | hypothetical protein | - |
| D3W53_RS24380 () | 33939..34724 | + | 786 | WP_001151304.1 | Sporulation initiation inhibitor protein Soj | VF |
| D3W53_RS24385 () | 34728..35909 | + | 1182 | WP_001207227.1 | ParB/RepB/Spo0J family partition protein | - |
| D3W53_RS24390 () | 35958..36230 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| D3W53_RS24395 () | 36283..36918 | - | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| D3W53_RS26445 () | 37010..37153 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| D3W53_RS24400 () | 37472..37849 | + | 378 | WP_001125905.1 | hypothetical protein | - |
| D3W53_RS26625 () | 37842..38123 | + | 282 | WP_000044824.1 | hypothetical protein | - |
| D3W53_RS24410 () | 38098..38772 | + | 675 | WP_000344151.1 | thymidylate kinase | - |
| D3W53_RS24415 () | 38840..39271 | + | 432 | WP_005507681.1 | hypothetical protein | - |
| D3W53_RS24420 () | 39277..39588 | + | 312 | WP_002210541.1 | hypothetical protein | - |
| D3W53_RS24425 () | 39597..40097 | + | 501 | WP_000647189.1 | hypothetical protein | - |
| D3W53_RS24430 () | 40101..41528 | + | 1428 | WP_000936896.1 | DNA cytosine methyltransferase | - |
| D3W53_RS24435 () | 41528..42184 | + | 657 | WP_000268551.1 | hypothetical protein | - |
| D3W53_RS24440 () | 42390..42608 | + | 219 | WP_000362482.1 | hypothetical protein | - |
| D3W53_RS24445 () | 42702..43319 | + | 618 | WP_000464631.1 | hypothetical protein | - |
| D3W53_RS24455 () | 43531..43830 | + | 300 | WP_000542259.1 | hypothetical protein | - |
| D3W53_RS24460 () | 43922..44410 | - | 489 | WP_000468105.1 | hypothetical protein | - |
| D3W53_RS24465 () | 44425..46617 | - | 2193 | WP_000366822.1 | DNA topoisomerase 3 | - |
| D3W53_RS24470 () | 46617..46850 | - | 234 | WP_001191892.1 | hypothetical protein | - |
| D3W53_RS24475 () | 46832..47449 | - | 618 | WP_001249396.1 | hypothetical protein | - |
| D3W53_RS24480 () | 47617..50589 | + | 2973 | WP_064986968.1 | hypothetical protein | Relaxase |
| D3W53_RS24485 () | 50586..52451 | + | 1866 | WP_000178857.1 | conjugative transfer system coupling protein TraD | - |
| D3W53_RS24490 () | 52462..53046 | + | 585 | WP_000332868.1 | hypothetical protein | - |
| D3W53_RS24495 () | 53003..53632 | + | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
| D3W53_RS24500 () | 53642..54088 | + | 447 | WP_000122507.1 | hypothetical protein | - |
| D3W53_RS24505 () | 54098..54475 | + | 378 | WP_000869297.1 | hypothetical protein | - |
| D3W53_RS24510 () | 54475..55137 | + | 663 | WP_001231464.1 | hypothetical protein | - |
| D3W53_RS26460 () | 55318..55461 | + | 144 | WP_001275801.1 | hypothetical protein | - |
| D3W53_RS24515 () | 55461..55838 | + | 378 | WP_001326174.1 | hypothetical protein | - |
| D3W53_RS24520 () | 55983..56264 | + | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| D3W53_RS24525 () | 56261..56887 | + | 627 | WP_001049717.1 | hypothetical protein | - |
| D3W53_RS24530 () | 56871..57788 | + | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| D3W53_RS24535 () | 57788..59101 | + | 1314 | WP_024131605.1 | conjugal transfer protein TraB | - |
| D3W53_RS24540 () | 59098..59676 | + | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| D3W53_RS24545 () | 59680..60072 | + | 393 | WP_000479535.1 | hypothetical protein | - |
| D3W53_RS24550 () | 60357..61619 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| D3W53_RS24555 () | 61943..63088 | + | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| D3W53_RS24560 () | 63182..63715 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| D3W53_RS24565 () | 63712..64029 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| D3W53_RS24575 () | 64757..70243 | + | 5487 | WP_000606835.1 | DUF4165 domain-containing protein | - |
| D3W53_RS24580 () | 70392..71099 | + | 708 | WP_001259346.1 | DsbC family protein | - |
| D3W53_RS24585 () | 71096..73543 | + | 2448 | WP_000637384.1 | type IV secretion system protein TraC | - |
| D3W53_RS24590 () | 73558..73875 | + | 318 | WP_000351984.1 | hypothetical protein | - |
| D3W53_RS24595 () | 73872..74402 | + | 531 | WP_001010740.1 | S26 family signal peptidase | - |
| D3W53_RS24600 () | 74365..75630 | + | 1266 | WP_001447719.1 | conjugal transfer protein TraW | - |
| D3W53_RS24605 () | 75627..76298 | + | 672 | WP_000575345.1 | EAL domain-containing protein | - |
| D3W53_RS24610 () | 76295..77302 | + | 1008 | WP_000983282.1 | TraU family protein | - |
| D3W53_RS24615 () | 77406..80213 | + | 2808 | WP_119173449.1 | conjugal transfer mating pair stabilization protein TraN | - |
| D3W53_RS24620 () | 80252..81112 | - | 861 | WP_000709517.1 | hypothetical protein | - |
| D3W53_RS24625 () | 81235..81876 | - | 642 | WP_000796664.1 | hypothetical protein | - |
| D3W53_RS24630 () | 82171..82491 | + | 321 | WP_000547566.1 | hypothetical protein | - |
| D3W53_RS24635 () | 82795..82980 | + | 186 | WP_001186917.1 | hypothetical protein | - |
| D3W53_RS24640 () | 83200..84168 | + | 969 | WP_000085160.1 | CbbQ/NirQ/NorQ C-terminal domain-containing protein | - |
| D3W53_RS24645 () | 84179..85087 | + | 909 | WP_000739139.1 | hypothetical protein | - |
| D3W53_RS24650 () | 85148..85678 | + | 531 | WP_000987165.1 | single-stranded DNA-binding protein | - |
| D3W53_RS24655 () | 85773..86762 | + | 990 | WP_001282585.1 | phage recombination protein Bet | - |
| D3W53_RS24660 () | 86825..87835 | + | 1011 | WP_000706865.1 | YqaJ viral recombinase family protein | - |
| D3W53_RS24670 () | 88035..89312 | + | 1278 | WP_000170087.1 | DUF3150 domain-containing protein | - |
| D3W53_RS24675 () | 89397..91193 | + | 1797 | WP_000039319.1 | VWA domain-containing protein | - |
| D3W53_RS24680 () | 91255..91590 | + | 336 | WP_001447572.1 | hypothetical protein | - |
| D3W53_RS24685 () | 91855..92394 | + | 540 | WP_000018872.1 | hypothetical protein | - |
| D3W53_RS24690 () | 92485..92985 | + | 501 | WP_000793769.1 | hypothetical protein | - |
| D3W53_RS24695 () | 93059..93943 | + | 885 | WP_000477209.1 | hypothetical protein | - |
| D3W53_RS24700 () | 94009..94233 | + | 225 | WP_001102700.1 | 2Fe-2S ferredoxin-like protein | - |
| D3W53_RS24705 () | 94295..94684 | + | 390 | WP_000026577.1 | hypothetical protein | - |
| D3W53_RS24710 () | 94674..95126 | + | 453 | WP_001176699.1 | hypothetical protein | - |
| D3W53_RS26465 () | 95204..95446 | - | 243 | WP_002210529.1 | hypothetical protein | - |
| D3W53_RS24720 () | 95464..95655 | + | 192 | WP_000651508.1 | hypothetical protein | - |
| D3W53_RS24725 () | 95700..96077 | + | 378 | WP_001337696.1 | hypothetical protein | - |
| D3W53_RS24730 () | 96252..97364 | - | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| D3W53_RS24735 () | 97619..97963 | + | 345 | WP_000209093.1 | hypothetical protein | - |
| D3W53_RS24740 () | 98041..98343 | + | 303 | WP_000410925.1 | hypothetical protein | - |
| D3W53_RS24745 () | 98421..100046 | + | 1626 | WP_064986925.1 | DNA cytosine methyltransferase | - |
| D3W53_RS24750 () | 100107..100538 | + | 432 | WP_000687894.1 | hypothetical protein | - |
| D3W53_RS24755 () | 100612..101166 | + | 555 | WP_001093867.1 | hypothetical protein | - |
| D3W53_RS24760 () | 101399..101785 | + | 387 | WP_000042274.1 | hypothetical protein | - |
| D3W53_RS24765 () | 101873..104326 | + | 2454 | WP_001187969.1 | phosphoadenosine phosphosulfate reductase | - |
| D3W53_RS24770 () | 104528..104731 | + | 204 | WP_000050847.1 | hypothetical protein | - |
| D3W53_RS24775 () | 104803..105408 | + | 606 | WP_000071870.1 | 5'-deoxynucleotidase | - |
| D3W53_RS24780 () | 105401..105670 | + | 270 | WP_000184110.1 | hypothetical protein | - |
| D3W53_RS24785 () | 105684..105902 | + | 219 | WP_000260293.1 | hypothetical protein | - |
| D3W53_RS24790 () | 105976..106533 | + | 558 | WP_000064432.1 | hypothetical protein | - |
| D3W53_RS24795 () | 106608..107459 | + | 852 | WP_000595210.1 | hypothetical protein | - |
| D3W53_RS24800 () | 107918..108304 | + | 387 | WP_001077336.1 | hypothetical protein | - |
| D3W53_RS24805 () | 108482..110209 | + | 1728 | WP_000122922.1 | toprim domain-containing protein | - |
| D3W53_RS24810 () | 110196..110474 | + | 279 | WP_000268337.1 | hypothetical protein | - |
| D3W53_RS24815 () | 110547..110768 | + | 222 | WP_000714163.1 | hypothetical protein | - |
| D3W53_RS24820 () | 110950..111954 | - | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| D3W53_RS24825 () | 112033..115005 | - | 2973 | WP_001138073.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| D3W53_RS24830 () | 115008..115565 | - | 558 | WP_001162012.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| D3W53_RS24840 () | 115862..116875 | - | 1014 | WP_000845039.1 | IS91 family transposase ISAzo26 | Transposase |
| D3W53_RS24845 () | 117227..117883 | + | 657 | WP_000361704.1 | Pentapeptide repeat protein | ARG |
| D3W53_RS24855 () | 118140..118472 | + | 333 | WP_015243636.1 | quaternary ammonium compound efflux SMR transporter QacF | - |
| D3W53_RS24860 () | 118718..119518 | + | 801 | WP_000846390.1 | Beta-lactamase OXA-10 | ARG |
| D3W53_RS24865 () | 119535..120326 | + | 792 | WP_001209508.1 | Streptomycin 3''-adenylyltransferase | ARG |
| D3W53_RS24870 () | 120361..120834 | + | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| D3W53_RS24875 () | 121055..121321 | + | 267 | WP_001144737.1 | plasmid mobilization relaxosome protein MobC | - |
| D3W53_RS24885 () | 121464..122228 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| D3W53_RS24900 () | 122721..123305 | - | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| D3W53_RS24905 () | 123305..124543 | - | 1239 | WP_000004159.1 | MFS transporter | - |
| D3W53_RS24910 () | 124540..125445 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| D3W53_RS24920 () | 125567..126271 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| D3W53_RS24925 () | 126336..127586 | - | 1251 | Protein_152 | DDE-type integrase/transposase/recombinase | - |
| D3W53_RS26475 () | 127661..127729 | - | 69 | Protein_153 | EAL domain-containing protein | - |
| D3W53_RS24935 () | 127768..128757 | - | 990 | WP_001276635.1 | putative signaling protein | VF |
| D3W53_RS24940 () | 128754..128990 | - | 237 | WP_001087810.1 | broad-spectrum mercury transporter MerE | - |
| D3W53_RS24945 () | 128987..129352 | - | 366 | WP_000995361.1 | mercury resistance co-regulator MerD | - |
| D3W53_RS24950 () | 129464..130102 | - | 639 | WP_000761850.1 | organomercurial lyase MerB | - |
| D3W53_RS24955 () | 130117..131802 | - | 1686 | WP_000149288.1 | mercury(II) reductase | - |
| D3W53_RS24960 () | 131874..132149 | - | 276 | WP_000732290.1 | mercury resistance system periplasmic binding protein MerP | - |
| D3W53_RS24965 () | 132165..132515 | - | 351 | WP_001294666.1 | mercuric transport protein MerT | - |
| D3W53_RS24970 () | 132587..133021 | + | 435 | WP_000414383.1 | IS607 family transposase ISChh1 | Transposase |
| D3W53_RS24975 () | 133121..134125 | + | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| D3W53_RS24980 () | 134402..134521 | + | 120 | Protein_163 | permease | - |
| D3W53_RS26480 () | 134531..134647 | + | 117 | WP_000338626.1 | hypothetical protein | - |
| D3W53_RS24985 () | 134768..135142 | + | 375 | WP_000868820.1 | hypothetical protein | - |
| D3W53_RS24990 () | 135256..135981 | + | 726 | WP_000988731.1 | hypothetical protein | - |
| D3W53_RS25000 () | 136114..140367 | + | 4254 | WP_001257735.1 | RHS repeat protein | - |
| D3W53_RS25005 () | 140339..140779 | + | 441 | WP_001326394.1 | hypothetical protein | - |
| D3W53_RS25010 () | 140950..141402 | + | 453 | Protein_169 | hypothetical protein | - |
| D3W53_RS25015 () | 141418..142020 | - | 603 | WP_000278322.1 | hypothetical protein | - |
| D3W53_RS25020 () | 142290..142571 | + | 282 | WP_000575657.1 | hypothetical protein | - |
| D3W53_RS25030 () | 142870..143406 | + | 537 | WP_000949433.1 | hypothetical protein | - |
| D3W53_RS25035 () | 143409..144419 | + | 1011 | WP_000543934.1 | IS91 family transposase ISWz1 | Transposase |
| D3W53_RS25040 () | 144424..145293 | + | 870 | WP_000997323.1 | 3'-5' exonuclease | - |
| D3W53_RS25045 () | 145290..145781 | + | 492 | WP_000139717.1 | hypothetical protein | - |
| D3W53_RS25050 () | 146108..146983 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| D3W53_RS25055 () | 147136..148176 | + | 1041 | WP_000101568.1 | DNA-binding protein | - |
| D3W53_RS25065 () | 148463..149974 | + | 1512 | WP_000811656.1 | ATP-dependent helicase | - |
| D3W53_RS25070 () | 150085..151125 | + | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| D3W53_RS25075 () | 151127..152560 | + | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| D3W53_RS25080 () | 152573..156187 | + | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| D3W53_RS25085 () | 156225..156587 | - | 363 | WP_000683483.1 | hypothetical protein | - |
| D3W53_RS25090 () | 157303..157575 | + | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| D3W53_RS25095 () | 157575..158108 | + | 534 | WP_032064504.1 | transglycosylase SLT domain-containing protein | - |
| D3W53_RS25100 () | 158119..158727 | + | 609 | WP_000891157.1 | hypothetical protein | - |
| D3W53_RS25105 () | 158724..159275 | + | 552 | WP_001020646.1 | hypothetical protein | - |
| D3W53_RS25110 () | 159335..159754 | - | 420 | WP_000651490.1 | H-NS histone family protein | - |
| D3W53_RS25115 () | 159756..160049 | - | 294 | WP_000919078.1 | hypothetical protein | - |
| D3W53_RS25120 () | 160066..161049 | - | 984 | WP_000077458.1 | ParM/StbA family protein | - |
| D3W53_RS25125 () | 161548..162087 | + | 540 | WP_001447712.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|