MGE detailed information
MGE type: Conjugative plasmid MGE length: 161618 bp
Accession: NZ_CP032209 Location: 1..161618 Organism: Klebsiella pneumoniae strain AR_0109 Replicon: plasmid unnamed3
Accession: NZ_CP032209 Location: 1..161618 Organism: Klebsiella pneumoniae strain AR_0109 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM488_RS28735 () | 1841..2386 | + | 546 | WP_004178052.1 | hypothetical protein | - |
| AM488_RS28740 () | 2601..2948 | - | 348 | WP_004152301.1 | hypothetical protein | - |
| AM488_RS28745 () | 2968..3564 | - | 597 | WP_004178053.1 | fertility inhibition protein FinO | - |
| AM488_RS28750 () | 3722..4447 | - | 726 | WP_004152303.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| AM488_RS28755 () | 4527..9788 | - | 5262 | WP_004153029.1 | Multifunctional conjugation protein TraI | Relaxase |
| AM488_RS28760 () | 9788..12097 | - | 2310 | Protein_6 | type IV conjugative transfer system coupling protein TraD | - |
| AM488_RS28765 () | 12457..13188 | - | 732 | WP_004152629.1 | complement resistance protein TraT | - |
| AM488_RS28770 () | 13378..13905 | - | 528 | WP_004153030.1 | hypothetical protein | - |
| AM488_RS28775 () | 13911..16760 | - | 2850 | WP_004178054.1 | conjugal transfer mating pair stabilization protein TraG | - |
| AM488_RS28780 () | 16760..18130 | - | 1371 | WP_004178055.1 | conjugal transfer protein TraH | - |
| AM488_RS28785 () | 18117..18545 | - | 429 | WP_004152689.1 | hypothetical protein | - |
| AM488_RS28790 () | 18538..19110 | - | 573 | WP_004152688.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| AM488_RS28795 () | 19082..19321 | - | 240 | WP_004152687.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| AM488_RS28800 () | 19332..20084 | - | 753 | WP_004152686.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| AM488_RS28805 () | 20105..20431 | - | 327 | WP_004152685.1 | hypothetical protein | - |
| AM488_RS28815 () | 20659..20895 | - | 237 | WP_004152683.1 | conjugal transfer protein TrbE | - |
| AM488_RS28820 () | 20927..22882 | - | 1956 | WP_004153093.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| AM488_RS28825 () | 22930..23568 | - | 639 | WP_004152682.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| AM488_RS28830 () | 23581..24573 | - | 993 | WP_004178057.1 | conjugal transfer pilus assembly protein TraU | - |
| AM488_RS28835 () | 24584..25210 | - | 627 | WP_004152590.1 | type-F conjugative transfer system protein TraW | - |
| AM488_RS28840 () | 25210..25599 | - | 390 | WP_004152591.1 | type-F conjugative transfer system protein TrbI | - |
| AM488_RS28845 () | 25599..28238 | - | 2640 | WP_004152592.1 | type IV secretion system protein TraC | - |
| AM488_RS28850 () | 28310..28708 | - | 399 | WP_004153071.1 | hypothetical protein | - |
| AM488_RS28860 () | 29004..29408 | - | 405 | WP_004152594.1 | hypothetical protein | - |
| AM488_RS28865 () | 29475..29792 | - | 318 | WP_004152595.1 | hypothetical protein | - |
| AM488_RS28870 () | 29793..30011 | - | 219 | WP_004171484.1 | hypothetical protein | - |
| AM488_RS28875 () | 30035..30325 | - | 291 | WP_004152596.1 | hypothetical protein | - |
| AM488_RS28880 () | 30330..30740 | - | 411 | WP_004152597.1 | lipase chaperone | - |
| AM488_RS28885 () | 30872..31441 | - | 570 | WP_004152598.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AM488_RS28890 () | 31464..32060 | - | 597 | WP_004152599.1 | conjugal transfer protein TraP | - |
| AM488_RS28895 () | 32053..33477 | - | 1425 | WP_004152600.1 | conjugal transfer protein TraB | - |
| AM488_RS28900 () | 33477..34217 | - | 741 | WP_004152601.1 | type-F conjugative transfer system secretin TraK | - |
| AM488_RS28905 () | 34204..34770 | - | 567 | WP_004152602.1 | type IV conjugative transfer system protein TraE | - |
| AM488_RS28910 () | 34790..35095 | - | 306 | WP_004178059.1 | type IV conjugative transfer system protein TraL | - |
| AM488_RS28915 () | 35109..35477 | - | 369 | WP_004178060.1 | type IV conjugative transfer system pilin TraA | - |
| AM488_RS28920 () | 35531..35902 | - | 372 | WP_004208838.1 | TraY domain-containing protein | - |
| AM488_RS28925 () | 35986..36672 | - | 687 | WP_011977735.1 | transcriptional regulator TraJ family protein | - |
| AM488_RS28930 () | 36895..37287 | - | 393 | WP_004178062.1 | relaxosome protein TraM | - |
| AM488_RS28935 () | 37721..38206 | + | 486 | WP_004178063.1 | hypothetical protein | VF |
| AM488_RS28940 () | 38239..38568 | - | 330 | WP_011977736.1 | hypothetical protein | - |
| AM488_RS28945 () | 38601..39422 | - | 822 | WP_004178064.1 | DUF945 domain-containing protein | - |
| AM488_RS28965 () | 40256..40669 | - | 414 | WP_004152722.1 | helix-turn-helix domain-containing protein | - |
| AM488_RS28970 () | 40670..40948 | - | 279 | WP_004152721.1 | helix-turn-helix domain-containing protein | - |
| AM488_RS28975 () | 40938..41258 | - | 321 | WP_004152720.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AM488_RS28980 () | 41339..41563 | - | 225 | WP_004152719.1 | hypothetical protein | - |
| AM488_RS28985 () | 41574..41786 | - | 213 | WP_004152718.1 | hypothetical protein | - |
| AM488_RS28990 () | 41847..42203 | - | 357 | WP_004152717.1 | hypothetical protein | - |
| AM488_RS29000 () | 42839..43189 | - | 351 | WP_004152758.1 | hypothetical protein | - |
| AM488_RS29005 () | 43186..43458 | - | 273 | WP_004152759.1 | hypothetical protein | - |
| AM488_RS29010 () | 44158..44319 | - | 162 | WP_004118124.1 | type I toxin-antitoxin system Hok family toxin | - |
| AM488_RS29015 () | 44391..45470 | + | 1080 | WP_004220208.1 | IS481 family transposase ISKpn28 | Transposase |
| AM488_RS29025 () | 45648..46022 | - | 375 | WP_004152638.1 | hypothetical protein | - |
| AM488_RS29030 () | 46078..46404 | - | 327 | WP_004152639.1 | hypothetical protein | - |
| AM488_RS29035 () | 46401..47129 | - | 729 | WP_004152640.1 | plasmid SOS inhibition protein A | - |
| AM488_RS29040 () | 47126..47557 | - | 432 | WP_004152641.1 | conjugation system SOS inhibitor PsiB | - |
| AM488_RS29045 () | 47624..49660 | - | 2037 | WP_004178066.1 | ParB/RepB/Spo0J family partition protein | - |
| AM488_RS29050 () | 49730..49978 | - | 249 | WP_004152643.1 | DUF905 domain-containing protein | - |
| AM488_RS29055 () | 50027..50569 | - | 543 | WP_004152644.1 | single-stranded DNA-binding protein | - |
| AM488_RS29070 () | 51345..51908 | - | 564 | WP_004152645.1 | methyltransferase | - |
| AM488_RS29075 () | 51956..53311 | - | 1356 | WP_004178068.1 | DUF3560 domain-containing protein | - |
| AM488_RS29080 () | 53363..53593 | - | 231 | WP_004198570.1 | hypothetical protein | - |
| AM488_RS29085 () | 53685..53912 | - | 228 | WP_004178072.1 | hypothetical protein | - |
| AM488_RS29095 () | 54694..55011 | - | 318 | WP_004118473.1 | hypothetical protein | - |
| AM488_RS29100 () | 55046..55300 | - | 255 | WP_004152754.1 | DNA polymerase III subunit theta | - |
| AM488_RS29105 () | 55537..55962 | - | 426 | WP_004118478.1 | antirestriction protein | - |
| AM488_RS29115 () | 56483..56713 | - | 231 | WP_004152753.1 | hypothetical protein | - |
| AM488_RS29120 () | 56947..58434 | - | 1488 | WP_162900227.1 | group II intron reverse transcriptase/maturase | - |
| AM488_RS29130 () | 58837..59262 | + | 426 | WP_004178083.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| AM488_RS29135 () | 59262..60533 | + | 1272 | WP_004152715.1 | Y-family DNA polymerase | - |
| AM488_RS29140 () | 60612..60827 | + | 216 | Protein_70 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| AM488_RS29145 () | 60850..62048 | - | 1199 | Protein_71 | IS200-IS605 family transposase IS609 | Transposase |
| AM488_RS29160 () | 63485..64456 | - | 972 | WP_004152062.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| AM488_RS29165 () | 64456..65622 | - | 1167 | WP_000523813.1 | Sporulation initiation inhibitor protein Soj | VF |
| AM488_RS29170 () | 66374..67384 | + | 1011 | WP_004152063.1 | RepB family plasmid replication initiator protein | - |
| AM488_RS29180 () | 68101..68841 | - | 741 | WP_001515717.1 | tyrosine-type recombinase/integrase | - |
| AM488_RS29185 () | 69985..70932 | + | 948 | WP_004152065.1 | sensor domain-containing diguanylate cyclase | - |
| AM488_RS29190 () | 70959..71270 | - | 312 | WP_071527918.1 | EAL domain-containing protein | - |
| AM488_RS29200 () | 71290..72258 | + | 969 | WP_011977741.1 | IS5 family transposase IS903B | Transposase |
| AM488_RS29205 () | 72931..73188 | - | 258 | WP_004197688.1 | hypothetical protein | - |
| AM488_RS29210 () | 73790..75244 | + | 1455 | WP_020444838.1 | putative cyclic di-GMP phosphodiesterase PdeB | VF |
| AM488_RS29215 () | 76227..77504 | - | 1278 | WP_004152070.1 | DUF2254 domain-containing protein | - |
| AM488_RS29220 () | 77567..79564 | - | 1998 | WP_004178088.1 | choline BCCT transporter BetT | - |
| AM488_RS29225 () | 79716..80413 | - | 698 | Protein_83 | IS1 family transposase IS1X2 | Transposase |
| AM488_RS29240 () | 81902..82386 | + | 485 | Protein_85 | IS1 family transposase IS1X2 | Transposase |
| AM488_RS29245 () | 82402..82944 | + | 543 | Protein_86 | ISL3 family transposase ISKpn25 | Transposase |
| AM488_RS29250 () | 83240..83671 | - | 432 | WP_004178091.1 | silver-binding protein SilE | - |
| AM488_RS29255 () | 83922..85397 | - | 1476 | WP_003032875.1 | copper/silver sensor histidine kinase SilS | - |
| AM488_RS29260 () | 85390..86070 | - | 681 | WP_001572351.1 | Transcriptional regulatory protein CusR | VF |
| AM488_RS29265 () | 86260..87645 | + | 1386 | WP_000475512.1 | Cation efflux system protein CusC | VF |
| AM488_RS29270 () | 87674..88027 | + | 354 | WP_001246153.1 | cation efflux system protein CusF | - |
| AM488_RS29275 () | 88141..89433 | + | 1293 | WP_004152079.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| AM488_RS29280 () | 89444..92590 | + | 3147 | WP_004098958.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| AM488_RS29285 () | 92677..93117 | + | 441 | WP_000758228.1 | hypothetical protein | - |
| AM488_RS29290 () | 93244..95691 | + | 2448 | WP_004098955.1 | Ag(+)-translocating P-type ATPase SilP | - |
| AM488_RS29295 () | 95732..95929 | + | 198 | WP_000843497.1 | DUF2933 domain-containing protein | - |
| AM488_RS29300 () | 95963..96700 | - | 738 | WP_004118669.1 | Murein DD-endopeptidase MepM | VF |
| AM488_RS29305 () | 96989..97438 | - | 450 | WP_001023257.1 | copper resistance protein | - |
| AM488_RS29310 () | 97672..99489 | + | 1818 | WP_000925242.1 | multicopper oxidase PcoA | - |
| AM488_RS29315 () | 99495..100385 | + | 891 | WP_001378118.1 | copper resistance outer membrane transporter PcoB | - |
| AM488_RS29320 () | 100425..100805 | + | 381 | WP_000025662.1 | copper resistance system metallochaperone PcoC | - |
| AM488_RS29325 () | 100810..101739 | + | 930 | WP_004118344.1 | copper resistance inner membrane protein PcoD | - |
| AM488_RS29330 () | 101794..102474 | + | 681 | WP_001188930.1 | Transcriptional activator protein CopR | VF |
| AM488_RS29335 () | 102471..103871 | + | 1401 | WP_004152084.1 | copper resistance membrane spanning protein PcoS | - |
| AM488_RS29340 () | 104088..104522 | + | 435 | WP_004152085.1 | copper resistance system metallochaperone PcoE | - |
| AM488_RS29345 () | 104754..104933 | - | 180 | WP_004152086.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AM488_RS29350 () | 104994..106614 | - | 1621 | Protein_107 | ISL3 family transposase ISEc38 | Transposase |
| AM488_RS29355 () | 106676..107185 | + | 510 | WP_031944101.1 | aquaporin | - |
| AM488_RS29360 () | 107235..107732 | - | 498 | WP_004152091.1 | GNAT family N-acetyltransferase | - |
| AM488_RS29365 () | 108064..108390 | + | 327 | WP_004152092.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| AM488_RS29370 () | 108387..109100 | + | 714 | WP_004152093.1 | arsenical resistance protein ArsH | - |
| AM488_RS29375 () | 109109..109654 | + | 546 | WP_004182005.1 | sigma-70 family RNA polymerase sigma factor | - |
| AM488_RS29380 () | 109730..110092 | + | 363 | WP_004152095.1 | arsenic metallochaperone ArsD family protein | - |
| AM488_RS29385 () | 110117..111867 | + | 1751 | Protein_114 | arsenical pump-driving ATPase | - |
| AM488_RS29390 () | 111989..112525 | + | 537 | WP_004152096.1 | GNAT family N-acetyltransferase | - |
| AM488_RS29395 () | 112558..112983 | - | 426 | WP_004152097.1 | glutaredoxin-dependent arsenate reductase | - |
| AM488_RS29400 () | 112996..114285 | - | 1290 | WP_004152098.1 | arsenite efflux transporter membrane subunit ArsB | - |
| AM488_RS29405 () | 114333..116084 | - | 1752 | WP_004152099.1 | Arsenical pump-driving ATPase | VF |
| AM488_RS29410 () | 116102..116464 | - | 363 | WP_004152100.1 | arsenite efflux transporter metallochaperone ArsD | - |
| AM488_RS29415 () | 116514..116864 | - | 351 | WP_004152101.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| AM488_RS29420 () | 117222..117491 | + | 270 | WP_004152102.1 | hypothetical protein | - |
| AM488_RS29425 () | 117479..118054 | + | 576 | WP_004152103.1 | hypothetical protein | - |
| AM488_RS29430 () | 118085..118579 | + | 495 | WP_004152104.1 | DNA-binding protein | - |
| AM488_RS29435 () | 118623..118991 | + | 369 | WP_004152105.1 | hypothetical protein | - |
| AM488_RS29440 () | 119025..119228 | + | 204 | WP_004152106.1 | hemolysin expression modulator Hha | - |
| AM488_RS29445 () | 119277..119534 | + | 258 | WP_004152107.1 | hypothetical protein | - |
| AM488_RS29450 () | 119610..119864 | + | 255 | WP_004152108.1 | hypothetical protein | - |
| AM488_RS29455 () | 120040..120306 | + | 267 | WP_003026799.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| AM488_RS29460 () | 120294..120776 | + | 483 | WP_003026803.1 | GNAT family N-acetyltransferase | Toxin Detail |
| AM488_RS29465 () | 120988..122334 | + | 1347 | WP_020314316.1 | ISNCY family transposase ISLad2 | Transposase |
| AM488_RS29470 () | 122835..124089 | - | 1255 | Protein_131 | IS3 family transposase ISKpn38 | Transposase |
| AM488_RS29475 () | 124177..125139 | - | 963 | WP_004152113.1 | M48 family metalloprotease | - |
| AM488_RS29480 () | 125126..125875 | - | 750 | WP_009483782.1 | phosphate-starvation-inducible PsiE family protein | - |
| AM488_RS29490 () | 126113..126310 | - | 198 | WP_004152115.1 | hypothetical protein | - |
| AM488_RS29495 () | 126310..129105 | - | 2796 | WP_004152116.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| AM488_RS29500 () | 129220..129789 | - | 570 | WP_004152117.1 | Spore protein SP21 | VF |
| AM488_RS29505 () | 129824..130105 | - | 282 | WP_004152118.1 | helix-turn-helix domain-containing protein | - |
| AM488_RS31780 () | 130349..130612 | - | 264 | WP_004118208.1 | hypothetical protein | - |
| AM488_RS31785 () | 130627..130890 | + | 264 | WP_004118209.1 | transposase | - |
| AM488_RS29515 () | 130835..130951 | + | 117 | Protein_140 | transposase domain-containing protein | - |
| AM488_RS29520 () | 131136..131833 | + | 698 | Protein_141 | IS1 family transposase IS1X2 | Transposase |
| AM488_RS29525 () | 132092..133072 | + | 981 | WP_000019473.1 | IS5 family transposase ISKpn26 | Transposase |
| AM488_RS29535 () | 133654..134173 | - | 520 | Protein_143 | IS5 family transposase ISPst7 | Transposase |
| AM488_RS29540 () | 134281..135150 | - | 870 | WP_004152692.1 | HTH-type transcriptional activator CmpR | VF |
| AM488_RS29545 () | 135144..136154 | - | 1011 | WP_004152693.1 | phosphonate dehydrogenase PtxD | - |
| AM488_RS29550 () | 136163..136990 | - | 828 | WP_004152694.1 | phosphonate ABC transporter, permease protein PhnE | - |
| AM488_RS29555 () | 136999..137862 | - | 864 | WP_004152695.1 | phosphate/phosphite/phosphonate ABC transporter substrate-binding protein | - |
| AM488_RS29560 () | 137859..138686 | - | 828 | WP_004153729.1 | Glutamine transport ATP-binding protein GlnQ | VF |
| AM488_RS29565 () | 139028..139336 | + | 309 | Protein_149 | IS5 family transposase ISThi1 | Transposase |
| AM488_RS29570 () | 139542..140210 | - | 669 | WP_044117068.1 | IS6 family transposase IS26 | Transposase |
| AM488_RS29575 () | 140502..141506 | - | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| AM488_RS29580 () | 141910..142920 | - | 1011 | WP_004152284.1 | zinc-binding alcohol dehydrogenase family protein | - |
| AM488_RS29590 () | 143381..144463 | + | 1083 | WP_004152286.1 | DNA-binding transcriptional repressor LacI | - |
| AM488_RS29595 () | 144585..147659 | + | 3075 | WP_004152287.1 | beta-galactosidase | - |
| AM488_RS29600 () | 147711..148964 | + | 1254 | WP_003846917.1 | lactose permease | - |
| AM488_RS29605 () | 149056..150025 | + | 970 | Protein_156 | IS5 family transposase IS903B | Transposase |
| AM488_RS29610 () | 150670..152979 | + | 2310 | WP_004152290.1 | TerB N-terminal domain-containing protein | - |
| AM488_RS29615 () | 152983..154299 | + | 1317 | WP_004152291.1 | ATP-binding protein | - |
| AM488_RS29620 () | 154296..156491 | + | 2196 | WP_000093087.1 | DEAD/DEAH box helicase | - |
| AM488_RS29635 () | 157938..158795 | - | 858 | WP_004152292.1 | incFII family plasmid replication initiator RepA | - |
| AM488_RS29640 () | 158788..158865 | - | 78 | WP_004171457.1 | RepA leader peptide Tap | - |
| AM488_RS29645 () | 159082..159360 | - | 279 | WP_004199332.1 | replication regulatory protein RepA | - |
| AM488_RS29650 () | 159681..160160 | - | 480 | WP_009485932.1 | Phospholipase D | VF |
| AM488_RS29655 () | 160501..160779 | - | 279 | WP_004152296.1 | bacteriocin immunity protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|