MGE detailed information
MGE type: Conjugative plasmid MGE length: 70275 bp
Accession: NZ_CP032205 Location: 1..70275 Organism: Escherichia coli strain AR_0013 Replicon: plasmid unnamed
Accession: NZ_CP032205 Location: 1..70275 Organism: Escherichia coli strain AR_0013 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM340_RS27915 () | 1735..2481 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| AM340_RS27920 () | 2540..3400 | + | 861 | WP_000704523.1 | putative protein YcjY | VF |
| AM340_RS27925 () | 3503..4063 | + | 561 | WP_000139323.1 | fertility inhibition protein FinO | - |
| AM340_RS27930 () | 4192..4404 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| AM340_RS27935 () | 4649..5110 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| AM340_RS27940 () | 5156..5365 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| AM340_RS27945 () | 5403..5993 | + | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| AM340_RS27950 () | 6233..6487 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| AM340_RS27960 () | 6725..6799 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| AM340_RS27965 () | 6792..7649 | + | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| AM340_RS28755 () | 8350..8508 | + | 159 | WP_032142560.1 | hypothetical protein | - |
| AM340_RS27975 () | 8563..8832 | + | 270 | WP_012881119.1 | ABC transporter ATPase | Antitoxin Detail |
| AM340_RS27980 () | 8829..9110 | + | 282 | WP_012881118.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AM340_RS27985 () | 9156..10004 | + | 849 | WP_012881117.1 | 3'-5' exonuclease | - |
| AM340_RS27990 () | 10121..10603 | + | 483 | WP_001311056.1 | hypothetical protein | - |
| AM340_RS27995 () | 10638..11744 | - | 1107 | Protein_16 | IS5 family transposase IS903B | Transposase |
| AM340_RS28000 () | 12196..13071 | - | 876 | WP_001617865.1 | Beta-lactamase CTX-M-97 | ARG |
| AM340_RS28005 () | 13321..14583 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| AM340_RS28010 () | 14927..16114 | - | 1188 | WP_025999368.1 | MFS transporter | - |
| AM340_RS28015 () | 16171..16932 | - | 762 | WP_000020504.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| AM340_RS28020 () | 16932..17969 | - | 1038 | WP_001545318.1 | Hemin transport system permease protein HmuU | VF |
| AM340_RS28025 () | 17969..18967 | - | 999 | WP_012881113.1 | ABC transporter substrate-binding protein | - |
| AM340_RS28030 () | 19117..19275 | - | 159 | Protein_23 | integrase core domain-containing protein | - |
| AM340_RS28035 () | 19318..19560 | - | 243 | Protein_24 | helix-turn-helix domain-containing protein | - |
| AM340_RS28045 () | 19818..20168 | - | 351 | WP_001414994.1 | plasmid partitioning/stability family protein | - |
| AM340_RS28050 () | 20171..21133 | - | 963 | WP_000959878.1 | plasmid segregation protein ParM | - |
| AM340_RS28055 () | 21280..21573 | + | 294 | WP_032142565.1 | hypothetical protein | - |
| AM340_RS28060 () | 21649..22332 | + | 684 | WP_012881149.1 | DNA methylase | - |
| AM340_RS28065 () | 22333..22554 | + | 222 | WP_012881148.1 | hypothetical protein | - |
| AM340_RS28070 () | 22568..23002 | + | 435 | WP_012917669.1 | DUF1380 family protein | - |
| AM340_RS28075 () | 23053..23829 | + | 777 | WP_025999342.1 | hypothetical protein | - |
| AM340_RS28090 () | 24368..24670 | + | 303 | WP_072126845.1 | antirestriction protein | - |
| AM340_RS28095 () | 24717..25139 | + | 423 | WP_012917670.1 | DUF1380 family protein | - |
| AM340_RS28100 () | 25136..25327 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| AM340_RS28115 () | 26364..26594 | + | 231 | WP_000155844.1 | hypothetical protein | - |
| AM340_RS28120 () | 26646..28007 | + | 1362 | WP_012917672.1 | DUF3560 domain-containing protein | - |
| AM340_RS28125 () | 28054..28617 | + | 564 | WP_012881140.1 | class I SAM-dependent methyltransferase | - |
| AM340_RS28150 () | 29502..30023 | + | 522 | WP_012881138.1 | single-stranded DNA-binding protein | - |
| AM340_RS28155 () | 30079..30312 | + | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
| AM340_RS28160 () | 30376..32334 | + | 1959 | WP_012881137.1 | ParB/RepB/Spo0J family partition protein | - |
| AM340_RS28165 () | 32389..32823 | + | 435 | WP_000845949.1 | conjugation system SOS inhibitor PsiB | - |
| AM340_RS28170 () | 32820..33539 | + | 720 | WP_012881136.1 | plasmid SOS inhibition protein A | - |
| AM340_RS28175 () | 33536..33850 | + | 315 | WP_000872086.1 | hypothetical protein | - |
| - () | 33799..34006 | + | 208 | NuclAT_0 | - | - |
| - () | 33799..34006 | + | 208 | NuclAT_0 | - | - |
| - () | 33799..34006 | + | 208 | NuclAT_0 | - | - |
| - () | 33799..34006 | + | 208 | NuclAT_0 | - | - |
| AM340_RS28180 () | 34059..34220 | + | 162 | WP_012881135.1 | type I toxin-antitoxin system Hok family toxin | - |
| AM340_RS28860 () | 34458..34727 | - | 270 | WP_001388591.1 | hypothetical protein | - |
| AM340_RS28200 () | 35066..35389 | + | 324 | WP_000533253.1 | hypothetical protein | - |
| AM340_RS28205 () | 35448..35690 | + | 243 | WP_000540588.1 | hypothetical protein | - |
| AM340_RS28230 () | 36687..36983 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| AM340_RS28235 () | 37093..37914 | + | 822 | WP_001234437.1 | DUF945 domain-containing protein | - |
| AM340_RS28240 () | 38210..38812 | - | 603 | WP_000243715.1 | hypothetical protein | VF |
| AM340_RS28250 () | 39135..39518 | + | 384 | WP_001354030.1 | relaxosome protein TraM | - |
| AM340_RS28255 () | 39712..40383 | + | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| AM340_RS28260 () | 40520..40747 | + | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| AM340_RS28265 () | 40780..41139 | + | 360 | WP_001098992.1 | type IV conjugative transfer system pilin TraA | - |
| AM340_RS28270 () | 41154..41465 | + | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| AM340_RS28275 () | 41487..42053 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| AM340_RS28280 () | 42040..42768 | + | 729 | WP_001230772.1 | type-F conjugative transfer system secretin TraK | - |
| AM340_RS28285 () | 42768..44219 | + | 1452 | WP_000146675.1 | conjugal transfer protein TraB | - |
| AM340_RS28290 () | 44188..44775 | + | 588 | WP_001444176.1 | conjugal transfer protein TraP | - |
| AM340_RS28295 () | 44714..45082 | + | 369 | WP_001315561.1 | conjugal transfer protein TrbD | - |
| AM340_RS28300 () | 45079..45594 | + | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AM340_RS28305 () | 45729..45950 | + | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| AM340_RS28310 () | 45943..46356 | + | 414 | WP_000549589.1 | hypothetical protein | - |
| AM340_RS28315 () | 46349..46822 | + | 474 | WP_000549568.1 | hypothetical protein | - |
| AM340_RS28320 () | 46902..47120 | + | 219 | WP_000556745.1 | hypothetical protein | - |
| AM340_RS28765 () | 47148..47495 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| AM340_RS28330 () | 47621..50251 | + | 2631 | WP_012917677.1 | type IV secretion system protein TraC | - |
| AM340_RS28335 () | 50248..50634 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| AM340_RS28340 () | 50631..51263 | + | 633 | WP_001203728.1 | type-F conjugative transfer system protein TraW | - |
| AM340_RS28345 () | 51260..52252 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| AM340_RS28350 () | 52282..52587 | + | 306 | WP_000224416.1 | hypothetical protein | - |
| AM340_RS28355 () | 52596..53234 | + | 639 | WP_001080256.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| AM340_RS28360 () | 53231..55081 | + | 1851 | WP_000821856.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| AM340_RS28365 () | 55108..55365 | + | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| AM340_RS28370 () | 55358..56101 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| AM340_RS28375 () | 56115..56459 | + | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| AM340_RS28380 () | 56578..56862 | + | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| AM340_RS28385 () | 56849..57394 | + | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| AM340_RS28390 () | 57324..57671 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| AM340_RS28395 () | 57619..58044 | + | 426 | WP_001444237.1 | F-type conjugal transfer protein TrbF | - |
| AM340_RS28400 () | 58031..59404 | + | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| AM340_RS28405 () | 59401..62223 | + | 2823 | WP_001007039.1 | conjugal transfer mating pair stabilization protein TraG | - |
| AM340_RS28410 () | 62239..62724 | + | 486 | WP_000605870.1 | hypothetical protein | - |
| AM340_RS28415 () | 62773..63504 | + | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| AM340_RS28420 () | 63707..64444 | + | 738 | WP_000199905.1 | hypothetical protein | - |
| AM340_RS28425 () | 64495..66720 | + | 2226 | WP_011867779.1 | type IV conjugative transfer system coupling protein TraD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|