MGE detailed information
MGE type: Conjugative plasmid MGE length: 130628 bp
Accession: NZ_CP032165 Location: 1..130628 Organism: Klebsiella pneumoniae strain XJ-K1 Replicon: plasmid unnamed2
Accession: NZ_CP032165 Location: 1..130628 Organism: Klebsiella pneumoniae strain XJ-K1 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D3H40_RS28405 () | 185..481 | + | 297 | WP_001545326.1 | hypothetical protein | - |
| D3H40_RS28410 () | 591..1411 | + | 821 | Protein_1 | DUF945 domain-containing protein | - |
| D3H40_RS28415 () | 1708..2310 | - | 603 | Protein_2 | hypothetical protein | VF |
| D3H40_RS28420 () | 2631..3014 | + | 384 | WP_001151538.1 | relaxosome protein TraM | - |
| D3H40_RS28425 () | 3201..3890 | + | 690 | WP_000283387.1 | conjugal transfer transcriptional regulator TraJ | - |
| D3H40_RS28430 () | 3989..4384 | + | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| D3H40_RS28435 () | 4417..4776 | + | 360 | WP_001099001.1 | type IV conjugative transfer system pilin TraA | - |
| D3H40_RS28440 () | 4791..5102 | + | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| D3H40_RS28445 () | 5124..5690 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| D3H40_RS28450 () | 5677..6405 | + | 729 | WP_001230767.1 | type-F conjugative transfer system secretin TraK | - |
| D3H40_RS28455 () | 6405..7856 | + | 1452 | WP_000146663.1 | conjugal transfer protein TraB | - |
| D3H40_RS28460 () | 7825..8412 | + | 588 | WP_001309238.1 | conjugal transfer protein TraP | - |
| D3H40_RS28465 () | 8366..8716 | + | 351 | WP_071586941.1 | conjugal transfer protein TrbD | - |
| D3H40_RS28470 () | 8716..9231 | + | 516 | WP_000809872.1 | type IV conjugative transfer system lipoprotein TraV | - |
| D3H40_RS28475 () | 9366..9587 | + | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| D3H40_RS28480 () | 9580..9993 | + | 414 | WP_000549574.1 | hypothetical protein | - |
| D3H40_RS28485 () | 9986..10459 | + | 474 | WP_000549566.1 | hypothetical protein | - |
| D3H40_RS28490 () | 10539..10757 | + | 219 | WP_000556746.1 | hypothetical protein | - |
| D3H40_RS28500 () | 11124..13754 | + | 2631 | WP_000069771.1 | type IV secretion system protein TraC | - |
| D3H40_RS28505 () | 13751..14137 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| D3H40_RS28510 () | 14134..14766 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| D3H40_RS28515 () | 14763..15755 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| D3H40_RS28520 () | 15782..16090 | + | 309 | WP_000412445.1 | hypothetical protein | - |
| D3H40_RS28525 () | 16153..16671 | + | 519 | WP_000009088.1 | hypothetical protein | - |
| D3H40_RS28530 () | 16698..17336 | + | 639 | WP_000087539.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| D3H40_RS28535 () | 17333..17704 | + | 372 | WP_000174465.1 | hypothetical protein | - |
| D3H40_RS28540 () | 17729..18151 | + | 423 | WP_001229309.1 | HNH endonuclease | - |
| D3H40_RS28545 () | 18148..19998 | + | 1851 | WP_139608492.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| D3H40_RS28550 () | 20025..20282 | + | 258 | WP_000864310.1 | conjugal transfer protein TrbE | - |
| D3H40_RS28555 () | 20269..21018 | + | 750 | WP_001336806.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| D3H40_RS28560 () | 21032..21373 | + | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| D3H40_RS28565 () | 21429..21689 | - | 261 | WP_000736412.1 | hypothetical protein | - |
| D3H40_RS28570 () | 21770..22054 | + | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| D3H40_RS28575 () | 22041..22586 | + | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| D3H40_RS28580 () | 22516..22890 | + | 375 | WP_071586940.1 | P-type conjugative transfer protein TrbJ | - |
| D3H40_RS28585 () | 22811..23236 | + | 426 | WP_001336804.1 | F-type conjugal transfer protein TrbF | - |
| D3H40_RS28590 () | 23214..24596 | + | 1383 | WP_001309243.1 | conjugal transfer protein TraH | - |
| D3H40_RS28595 () | 24593..27412 | + | 2820 | WP_001537571.1 | conjugal transfer mating pair stabilization protein TraG | - |
| D3H40_RS28600 () | 27431..27928 | + | 498 | WP_000605862.1 | entry exclusion protein | - |
| D3H40_RS28605 () | 27960..28691 | + | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| D3H40_RS28610 () | 28894..29631 | + | 738 | WP_000199901.1 | hypothetical protein | - |
| D3H40_RS28615 () | 29682..32060 | + | 2379 | WP_139608494.1 | Coupling protein TraD | VF |
| D3H40_RS28620 () | 32060..37330 | + | 5271 | WP_001545323.1 | Multifunctional conjugation protein TraI | Relaxase |
| D3H40_RS28625 () | 37350..38096 | + | 747 | WP_000205709.1 | conjugal transfer pilus acetylase TraX | - |
| D3H40_RS28630 () | 38151..38708 | + | 558 | WP_000139329.1 | fertility inhibition protein FinO | - |
| D3H40_RS28640 () | 39816..40277 | + | 462 | WP_000760080.1 | thermonuclease family protein | - |
| D3H40_RS28645 () | 40380..40763 | + | 384 | WP_001109264.1 | hypothetical protein | - |
| D3H40_RS28650 () | 40916..41353 | + | 438 | WP_000872609.1 | hypothetical protein | - |
| - () | 41448..41504 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 41448..41504 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 41448..41504 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 41448..41504 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| D3H40_RS28660 () | 41552..41701 | + | 150 | WP_001336447.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| D3H40_RS28665 () | 41986..42243 | + | 258 | WP_000084404.1 | replication regulatory protein RepA | - |
| D3H40_RS28675 () | 42477..42551 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| D3H40_RS28680 () | 42544..43401 | + | 858 | WP_001537577.1 | incFII family plasmid replication initiator RepA | - |
| D3H40_RS28690 () | 44102..44314 | + | 213 | WP_001336932.1 | hypothetical protein | - |
| D3H40_RS28695 () | 44429..44737 | - | 309 | Protein_53 | IS91 family transposase ISSbo1 | Transposase |
| D3H40_RS30720 () | 44930..45028 | + | 99 | WP_137491101.1 | transposase | - |
| D3H40_RS28705 () | 45178..45426 | - | 249 | WP_000738203.1 | hypothetical protein | - |
| D3H40_RS28710 () | 45456..46226 | - | 771 | WP_000712166.1 | molybdopterin-dependent oxidoreductase | - |
| D3H40_RS28715 () | 46237..46836 | - | 600 | WP_001177183.1 | cytochrome b/b6 domain-containing protein | - |
| D3H40_RS28720 () | 46978..47700 | + | 723 | WP_001057737.1 | Transcriptional regulatory protein WalR | VF |
| D3H40_RS28725 () | 47697..49169 | + | 1473 | WP_118373126.1 | two-component sensor histidine kinase | - |
| D3H40_RS28730 () | 49547..49714 | - | 168 | Protein_60 | IS110 family transposase | - |
| D3H40_RS28735 () | 49768..50472 | - | 705 | WP_001067834.1 | IS6 family transposase IS26 | Transposase |
| D3H40_RS30725 () | 50509..50799 | - | 291 | WP_032152941.1 | DUF3330 domain-containing protein | - |
| D3H40_RS28745 () | 51002..52015 | - | 1014 | WP_000845039.1 | IS91 family transposase ISAzo26 | Transposase |
| D3H40_RS28750 () | 52160..52657 | + | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| D3H40_RS28755 () | 52769..53059 | + | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| D3H40_RS28760 () | 53065..53856 | + | 792 | WP_001206356.1 | Streptomycin 3''-adenylyltransferase | ARG |
| D3H40_RS28765 () | 54020..54367 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| D3H40_RS28770 () | 54361..55200 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| D3H40_RS28780 () | 55397..55600 | + | 204 | WP_064765192.1 | hypothetical protein | - |
| D3H40_RS28785 () | 55782..56786 | - | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| D3H40_RS28790 () | 57014..58219 | + | 1206 | WP_065726122.1 | chromate efflux transporter | - |
| D3H40_RS28795 () | 58230..58535 | + | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| D3H40_RS30730 () | 58579..58644 | + | 66 | Protein_73 | EAL domain-containing protein | - |
| D3H40_RS28805 () | 58762..59526 | + | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| D3H40_RS28820 () | 60019..60603 | - | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| D3H40_RS28825 () | 60603..61841 | - | 1239 | WP_000004159.1 | MFS transporter | - |
| D3H40_RS28830 () | 61838..62743 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| D3H40_RS28840 () | 62865..63569 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| D3H40_RS28845 () | 63635..65532 | + | 1898 | Protein_79 | fimbria/pilus outer membrane usher protein | - |
| D3H40_RS28850 () | 65548..65970 | + | 423 | WP_000243157.1 | Protein AfaD | VF |
| D3H40_RS28855 () | 66078..66563 | + | 486 | WP_001545321.1 | Dr family adhesin structural subunit | - |
| D3H40_RS28865 () | 68301..68717 | + | 417 | WP_000466682.1 | SdiA-regulated domain-containing protein | - |
| D3H40_RS28870 () | 68922..69713 | - | 792 | WP_000456855.1 | Virulence regulon transcriptional activator VirF | VF |
| D3H40_RS28875 () | 70038..70543 | + | 506 | Protein_85 | IS3 family transposase IS3H | Transposase |
| D3H40_RS28880 () | 70536..70649 | + | 114 | Protein_86 | transposase | - |
| D3H40_RS28885 () | 70799..71797 | + | 999 | WP_000756334.1 | ABC transporter substrate-binding protein | - |
| D3H40_RS28890 () | 71797..72834 | + | 1038 | WP_001545318.1 | Hemin transport system permease protein HmuU | VF |
| D3H40_RS28895 () | 72834..73595 | + | 762 | WP_000020504.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| D3H40_RS28900 () | 73652..74839 | + | 1188 | WP_025999368.1 | MFS transporter | - |
| D3H40_RS28905 () | 74917..75192 | - | 276 | WP_000877662.1 | bacteriocin immunity protein | - |
| D3H40_RS30735 () | 75179..75325 | + | 147 | WP_001337002.1 | hypothetical protein | - |
| D3H40_RS28910 () | 75550..75849 | - | 300 | WP_000119542.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| D3H40_RS28915 () | 75839..76102 | - | 264 | WP_001089474.1 | hypothetical protein | - |
| D3H40_RS28920 () | 76209..76469 | - | 261 | WP_001545316.1 | hypothetical protein | - |
| D3H40_RS28925 () | 76679..77161 | - | 483 | WP_001337004.1 | hypothetical protein | - |
| D3H40_RS28930 () | 77278..78126 | - | 849 | WP_001057995.1 | 3'-5' exonuclease | - |
| D3H40_RS28935 () | 78242..78391 | - | 150 | Protein_98 | IS3 family transposase | - |
| D3H40_RS28940 () | 78430..79968 | - | 1539 | WP_000099150.1 | IS66 family transposase ISEc22 | Transposase |
| D3H40_RS28945 () | 80017..80364 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| D3H40_RS28950 () | 80361..80765 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| D3H40_RS28955 () | 80881..81915 | + | 1035 | Protein_102 | IS3 family transposase IS3 | Transposase |
| D3H40_RS28960 () | 82144..83651 | - | 1508 | Protein_103 | group II intron reverse transcriptase/maturase | - |
| D3H40_RS28970 () | 84324..84674 | - | 351 | Protein_104 | IS3 family transposase IS629 | Transposase |
| D3H40_RS28975 () | 84760..86259 | + | 1500 | WP_000143800.1 | IS21 family transposase ISEc10 | Transposase |
| D3H40_RS28980 () | 86256..87011 | + | 756 | WP_000065240.1 | IS21 family transposase ISEc10 | Transposase |
| D3H40_RS28985 () | 87122..88168 | + | 1047 | WP_063922044.1 | IS481 family transposase ISKpn28 | Transposase |
| D3H40_RS28990 () | 88177..88580 | - | 404 | Protein_108 | IS3 family transposase IS629 | Transposase |
| D3H40_RS28995 () | 88606..88911 | + | 306 | Protein_109 | IS91 family transposase ISSbo1 | Transposase |
| D3H40_RS29000 () | 89434..90609 | - | 1176 | WP_001020413.1 | putative protein YncE | VF |
| D3H40_RS29010 () | 90678..92939 | - | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| D3H40_RS29015 () | 93108..93884 | - | 777 | WP_000981091.1 | energy transducer TonB | - |
| D3H40_RS29020 () | 93892..94767 | - | 876 | WP_001537591.1 | ChaN family lipoprotein | - |
| D3H40_RS29025 () | 95099..95785 | - | 687 | Protein_114 | replication initiation protein | - |
| D3H40_RS29045 () | 97355..97573 | - | 219 | WP_001336934.1 | hypothetical protein | - |
| D3H40_RS29050 () | 97702..98049 | + | 348 | WP_000142452.1 | hypothetical protein | - |
| D3H40_RS29055 () | 98069..98578 | - | 510 | WP_000194542.1 | hypothetical protein | - |
| D3H40_RS29060 () | 98575..98835 | - | 261 | WP_000371883.1 | hypothetical protein | - |
| D3H40_RS29065 () | 98937..99676 | + | 740 | Protein_119 | IS3 family transposase IS629 | Transposase |
| D3H40_RS29075 () | 100349..101857 | + | 1509 | WP_032145081.1 | group II intron reverse transcriptase/maturase | - |
| D3H40_RS29080 () | 101941..102420 | + | 480 | Protein_121 | IS3 family transposase IS629 | Transposase |
| D3H40_RS29085 () | 102510..102946 | + | 437 | Protein_122 | IS3 family transposase IS2 | Transposase |
| D3H40_RS29090 () | 103471..103743 | + | 273 | WP_001322642.1 | Major pilu subunit operon regulatory protein PapB | VF |
| D3H40_RS29095 () | 104189..104364 | + | 176 | Protein_124 | IS3 family transposase | - |
| D3H40_RS29100 () | 104590..105759 | - | 1170 | WP_001072358.1 | hypothetical protein | - |
| D3H40_RS29105 () | 106126..106314 | + | 189 | WP_001332784.1 | hypothetical protein | - |
| D3H40_RS29110 () | 106435..107175 | + | 741 | WP_001066947.1 | IS91 family transposase ISMno23 | Transposase |
| D3H40_RS29115 () | 107418..108395 | - | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| D3H40_RS29125 () | 109039..109450 | - | 412 | Protein_129 | DDE-type integrase/transposase/recombinase | - |
| D3H40_RS29130 () | 109452..109739 | - | 288 | WP_001270422.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D3H40_RS29135 () | 109736..109987 | - | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| D3H40_RS29145 () | 110745..111950 | + | 1206 | WP_000817635.1 | Plasmid partition protein A | VF |
| D3H40_RS29150 () | 111947..112909 | + | 963 | WP_000756328.1 | ParB/RepB/Spo0J family partition protein | - |
| D3H40_RS29155 () | 113143..113919 | + | 777 | Protein_134 | hypothetical protein | - |
| D3H40_RS29165 () | 114049..114549 | - | 501 | WP_072164940.1 | DUF4113 domain-containing protein | - |
| D3H40_RS29175 () | 114659..114970 | + | 312 | WP_001309256.1 | hypothetical protein | - |
| D3H40_RS29180 () | 115046..115729 | + | 684 | WP_000086171.1 | DNA methylase | - |
| D3H40_RS29185 () | 115730..115951 | + | 222 | WP_001104892.1 | hypothetical protein | - |
| D3H40_RS29190 () | 115965..116399 | + | 435 | WP_000274451.1 | DUF1380 family protein | - |
| D3H40_RS29195 () | 116444..117214 | + | 771 | WP_001044390.1 | hypothetical protein | - |
| D3H40_RS29210 () | 117628..118053 | + | 426 | WP_001198915.1 | antirestriction protein | - |
| D3H40_RS29215 () | 118053..118482 | + | 430 | Protein_142 | DUF1380 family protein | - |
| D3H40_RS30740 () | 118514..118705 | + | 192 | WP_001027049.1 | hypothetical protein | - |
| D3H40_RS30745 () | 118684..118992 | - | 309 | WP_050576143.1 | hypothetical protein | - |
| D3H40_RS29230 () | 119673..119903 | + | 231 | WP_118373130.1 | hypothetical protein | - |
| D3H40_RS29235 () | 119955..121316 | + | 1362 | WP_000170705.1 | DUF3560 domain-containing protein | - |
| D3H40_RS29240 () | 121363..121926 | + | 564 | WP_001309257.1 | class I SAM-dependent methyltransferase | - |
| D3H40_RS29255 () | 123409..125310 | + | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| D3H40_RS29260 () | 125460..125945 | + | 486 | WP_031311812.1 | single-stranded DNA-binding protein | - |
| D3H40_RS29265 () | 126003..126236 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| D3H40_RS29270 () | 126297..128261 | + | 1965 | WP_001537566.1 | ParB/RepB/Spo0J family partition protein | - |
| D3H40_RS29275 () | 128330..128764 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| D3H40_RS29280 () | 128761..129480 | + | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| - () | 129492..129716 | + | 225 | NuclAT_0 | - | - |
| - () | 129492..129716 | + | 225 | NuclAT_0 | - | - |
| - () | 129492..129716 | + | 225 | NuclAT_0 | - | - |
| - () | 129492..129716 | + | 225 | NuclAT_0 | - | - |
| - () | 129648..129711 | - | 64 | - | - | Antitoxin Detail |
| D3H40_RS29285 () | 129760..129918 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| D3H40_RS30750 () | 130156..130422 | - | 267 | Protein_155 | pilus protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|