MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 176380 bp
Accession: NZ_CP032095 Location: 1..176380 Organism: Vibrio alfacsensis strain CAIM 1831 Replicon: plasmid pVa1
Accession: NZ_CP032095 Location: 1..176380 Organism: Vibrio alfacsensis strain CAIM 1831 Replicon: plasmid pVa1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D1115_RS22235 () | 1..1200 | + | 1200 | WP_128813537.1 | ParA family protein | - |
| D1115_RS22240 () | 1200..2277 | + | 1078 | Protein_1 | winged helix-turn-helix transcriptional regulator | - |
| D1115_RS22245 () | 2714..3493 | - | 780 | WP_128813538.1 | SDR family oxidoreductase | - |
| D1115_RS22250 () | 3516..4538 | - | 1023 | WP_128813539.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| D1115_RS22255 () | 4549..5451 | - | 903 | WP_128813540.1 | acetaldehyde dehydrogenase (acetylating) | - |
| D1115_RS22260 () | 5498..6295 | - | 798 | WP_128813541.1 | fumarylacetoacetate hydrolase family protein | - |
| D1115_RS22265 () | 6306..7274 | - | 969 | WP_128813542.1 | flavin reductase | - |
| D1115_RS22270 () | 7523..8908 | + | 1386 | WP_128813543.1 | DUF1329 domain-containing protein | - |
| D1115_RS22275 () | 8921..10447 | + | 1527 | WP_128813544.1 | DUF1302 family protein | - |
| D1115_RS22280 () | 10688..11698 | + | 1011 | WP_128813545.1 | glycosyl hydrolase | - |
| D1115_RS22285 () | 11716..14121 | + | 2406 | WP_128813546.1 | MMPL family transporter | - |
| D1115_RS22290 () | 14788..15863 | + | 1076 | Protein_11 | replication initiation protein | - |
| D1115_RS22295 () | 16637..18057 | - | 1421 | Protein_12 | aldehyde dehydrogenase family protein | - |
| D1115_RS22300 () | 18142..20254 | - | 2113 | Protein_13 | FAD-dependent oxidoreductase | - |
| D1115_RS22305 () | 20273..21103 | - | 831 | WP_128813669.1 | alpha/beta fold hydrolase | - |
| D1115_RS22310 () | 21403..23291 | + | 1889 | Protein_15 | long-chain-acyl-CoA synthetase | - |
| D1115_RS22315 () | 23308..24512 | + | 1205 | Protein_16 | thiolase family protein | - |
| D1115_RS22320 () | 24516..25448 | + | 933 | Protein_17 | OB-fold domain-containing protein | - |
| D1115_RS22330 () | 29121..29762 | + | 642 | WP_128813548.1 | START domain-containing protein | - |
| D1115_RS22335 () | 30265..30465 | - | 201 | WP_164837332.1 | TonB-dependent receptor | - |
| D1115_RS22340 () | 30434..30829 | - | 396 | WP_128813550.1 | hypothetical protein | - |
| D1115_RS22345 () | 30894..31559 | - | 666 | WP_164837333.1 | TonB-dependent receptor | - |
| D1115_RS22350 () | 31723..31971 | - | 249 | WP_128813552.1 | TonB-dependent receptor plug domain-containing protein | - |
| D1115_RS22355 () | 32037..32225 | - | 189 | WP_128813553.1 | hypothetical protein | - |
| D1115_RS22360 () | 32537..33091 | + | 555 | WP_128813554.1 | hypothetical protein | - |
| D1115_RS22365 () | 33335..33673 | + | 339 | WP_128813555.1 | ATP-binding protein | - |
| D1115_RS22370 () | 33654..34172 | + | 519 | WP_128813556.1 | Photosynthetic apparatus regulatory protein RegA | VF |
| D1115_RS22375 () | 34685..35611 | + | 927 | WP_164837341.1 | universal stress protein | - |
| D1115_RS22380 () | 36249..37385 | + | 1137 | WP_128813557.1 | hypothetical protein | - |
| D1115_RS22385 () | 37438..38777 | + | 1340 | Protein_29 | DUF4040 domain-containing protein | - |
| D1115_RS22390 () | 38777..39128 | + | 352 | Protein_30 | Na+/H+ antiporter subunit C | - |
| D1115_RS22395 () | 39125..40609 | + | 1485 | Protein_31 | Na+/H+ antiporter subunit D | - |
| D1115_RS22400 () | 40722..41153 | + | 432 | Protein_32 | Na+/H+ antiporter subunit E | - |
| D1115_RS22405 () | 41182..41441 | + | 260 | Protein_33 | cation:proton antiporter | - |
| D1115_RS22410 () | 41467..41736 | + | 270 | WP_128813558.1 | monovalent cation/H(+) antiporter subunit G | - |
| D1115_RS22415 () | 41919..42185 | - | 267 | WP_128813559.1 | hypothetical protein | - |
| D1115_RS22420 () | 43204..44126 | + | 923 | Protein_36 | ion transporter | - |
| D1115_RS22425 () | 44240..44509 | + | 270 | Protein_37 | IS3 family transposase ISAs6 | Transposase |
| D1115_RS22430 () | 44517..45341 | + | 825 | Protein_38 | Sulfate/thiosulfate import ATP-binding protein CysA | VF |
| D1115_RS22435 () | 45350..47074 | + | 1725 | WP_128813560.1 | putative 2-aminoethylphosphonate ABC transporter permease subunit | - |
| D1115_RS22440 () | 47084..47788 | + | 705 | WP_128813561.1 | phosphonate utilization transcriptional regulator PhnR | - |
| D1115_RS22445 () | 47855..48097 | + | 243 | Protein_41 | multidrug transporter | - |
| D1115_RS22450 () | 48147..49235 | - | 1089 | WP_128813562.1 | nucleotidyltransferase family protein | - |
| D1115_RS22455 () | 49219..50115 | - | 897 | WP_128813563.1 | HprK-related kinase A | - |
| D1115_RS22460 () | 50402..51214 | - | 813 | WP_128813564.1 | hypothetical protein | - |
| D1115_RS22465 () | 51544..52434 | + | 891 | WP_128813565.1 | VOC family protein | - |
| D1115_RS22470 () | 52436..53311 | + | 876 | WP_128813566.1 | CoA transferase subunit A | - |
| D1115_RS22475 () | 53323..54153 | + | 831 | WP_128813567.1 | ketoacid CoA transferase | - |
| D1115_RS22480 () | 54150..55031 | + | 882 | WP_128813568.1 | enoyl-CoA hydratase | - |
| D1115_RS22485 () | 55037..56131 | + | 1095 | WP_128813569.1 | nitronate monooxygenase | - |
| D1115_RS22490 () | 56132..56899 | + | 768 | WP_128813570.1 | enoyl-CoA hydratase family protein | - |
| D1115_RS22495 () | 56918..58069 | + | 1152 | WP_128813571.1 | acyl-CoA dehydrogenase family protein | - |
| D1115_RS22500 () | 58078..59148 | + | 1071 | WP_128813572.1 | acyl-CoA/acyl-ACP dehydrogenase | - |
| D1115_RS22505 () | 59148..60299 | + | 1152 | WP_128813573.1 | acetyl-CoA C-acetyltransferase | - |
| D1115_RS22510 () | 60356..61234 | + | 879 | WP_128813574.1 | Putative short-chain type dehydrogenase/reductase | VF |
| D1115_RS22515 () | 61236..62825 | + | 1590 | WP_128813575.1 | amidase | - |
| D1115_RS22520 () | 62969..63223 | + | 255 | WP_128813576.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| D1115_RS22525 () | 63216..63485 | + | 270 | WP_128813577.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| D1115_RS22530 () | 63548..63880 | - | 333 | WP_128813578.1 | SEC-C domain-containing protein | - |
| D1115_RS22535 () | 64150..64377 | - | 228 | WP_128813579.1 | hypothetical protein | - |
| D1115_RS22540 () | 64594..64896 | - | 303 | Protein_60 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| D1115_RS22545 () | 64896..65156 | - | 261 | WP_128813580.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| D1115_RS22550 () | 66200..66409 | + | 210 | WP_128813581.1 | hypothetical protein | - |
| D1115_RS22560 () | 66859..68223 | + | 1365 | WP_128813583.1 | endonuclease/exonuclease/phosphatase family protein | - |
| D1115_RS22570 () | 68816..70036 | + | 1221 | WP_128813584.1 | flavin-dependent monooxygenase | - |
| D1115_RS22575 () | 70064..71092 | + | 1029 | WP_128813585.1 | ferredoxin--NADP reductase | - |
| D1115_RS22580 () | 71608..72372 | + | 765 | WP_128813586.1 | hypothetical protein | - |
| D1115_RS22585 () | 72550..73299 | + | 750 | WP_128813587.1 | electron transfer flavoprotein subunit beta/FixA family protein | - |
| D1115_RS22590 () | 73309..74268 | + | 960 | WP_128813588.1 | electron transfer flavoprotein subunit alpha/FixB family protein | - |
| D1115_RS22595 () | 74335..75507 | + | 1173 | WP_128813589.1 | helix-turn-helix transcriptional regulator | - |
| D1115_RS22600 () | 75677..76453 | - | 777 | WP_128813590.1 | enoyl-CoA hydratase | - |
| D1115_RS22605 () | 76599..77363 | + | 765 | WP_128813591.1 | 3-beta-hydroxycholanate 3-dehydrogenase (NAD(+)) 1 | VF |
| D1115_RS22610 () | 77403..78374 | + | 972 | WP_206513234.1 | OB-fold domain-containing protein | - |
| D1115_RS22615 () | 78374..79483 | + | 1110 | WP_128813592.1 | acyl-CoA/acyl-ACP dehydrogenase | - |
| D1115_RS22620 () | 79464..79886 | + | 423 | WP_128813593.1 | MaoC family dehydratase | - |
| D1115_RS22625 () | 79898..81097 | + | 1200 | WP_128813594.1 | lipid-transfer protein | - |
| D1115_RS22630 () | 81082..82248 | + | 1167 | WP_128813595.1 | acyl-CoA dehydrogenase family protein | - |
| D1115_RS22635 () | 82265..83473 | + | 1209 | WP_128813596.1 | acyl-CoA dehydrogenase family protein | - |
| D1115_RS22640 () | 83486..84613 | + | 1128 | WP_128813597.1 | acyl-CoA dehydrogenase family protein | - |
| D1115_RS22645 () | 85072..85527 | + | 456 | WP_128813598.1 | PEP-CTERM sorting domain-containing protein | - |
| D1115_RS22650 () | 85536..87260 | - | 1725 | WP_128813599.1 | SLC13 family permease | - |
| D1115_RS22655 () | 87325..88776 | - | 1452 | WP_128813600.1 | sulfate adenylyltransferase subunit CysN | - |
| D1115_RS22660 () | 88822..89730 | - | 909 | WP_128813601.1 | sulfate adenylyltransferase subunit CysD | - |
| D1115_RS22665 () | 90218..93226 | + | 3009 | WP_128813602.1 | hypothetical protein | - |
| D1115_RS22670 () | 93223..93852 | + | 630 | WP_128813603.1 | Putative glutamine amidotransferase | VF |
| D1115_RS22675 () | 93849..94627 | + | 779 | Protein_85 | Bifunctional IPC transferase and DIPP synthase | VF |
| D1115_RS22680 () | 94817..95899 | + | 1083 | WP_128813604.1 | CDP-glycerol glycerophosphotransferase family protein | - |
| D1115_RS22685 () | 95926..96540 | - | 615 | WP_128813605.1 | 3'-5' exonuclease | - |
| D1115_RS22690 () | 96666..97679 | - | 1014 | WP_128813606.1 | glycosyltransferase | - |
| D1115_RS22695 () | 97714..98583 | - | 870 | WP_128813607.1 | glycosyltransferase family 2 protein | - |
| D1115_RS22700 () | 98596..99693 | - | 1098 | WP_128813608.1 | GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)- diNAcBac-PP-undecaprenol alpha-1,4-N-acetyl-D-galactosaminyltransferase | VF |
| D1115_RS22705 () | 99709..100878 | - | 1170 | WP_128813609.1 | glycosyltransferase family 4 protein | - |
| D1115_RS22710 () | 100902..102131 | - | 1230 | WP_128813610.1 | Putative teichuronic acid biosynthesis glycosyltransferase TuaC | VF |
| D1115_RS22715 () | 102137..104017 | - | 1881 | WP_128813611.1 | Asparagine synthetase [glutamine-hydrolyzing] 1 | VF |
| D1115_RS22720 () | 104032..105456 | - | 1425 | WP_164837334.1 | exosortase A | - |
| D1115_RS22725 () | 105461..106678 | - | 1218 | WP_128813613.1 | TIGR03087 family PEP-CTERM/XrtA system glycosyltransferase | - |
| D1115_RS22730 () | 106682..107725 | - | 1044 | WP_128813614.1 | FemAB family PEP-CTERM system-associated protein | - |
| D1115_RS22735 () | 107655..108593 | - | 939 | WP_128813615.1 | Peptidoglycan deacetylase | VF |
| D1115_RS22740 () | 108598..109997 | - | 1400 | Protein_98 | Putative undecaprenyl-phosphate N-acetylgalactosaminyl 1-phosphate transferase | VF |
| D1115_RS22745 () | 110733..111383 | + | 651 | WP_128813616.1 | hypothetical protein | VF |
| D1115_RS22750 () | 111401..112966 | + | 1566 | WP_128813617.1 | chain length determinant family protein | - |
| D1115_RS22755 () | 112983..113798 | + | 816 | WP_128813618.1 | Putative tyrosine-protein kinase YveL | VF |
| D1115_RS22760 () | 113791..115221 | + | 1431 | WP_128813619.1 | hypothetical protein | - |
| D1115_RS22765 () | 115277..115615 | + | 339 | WP_128813620.1 | hypothetical protein | - |
| D1115_RS22770 () | 115711..116607 | + | 897 | WP_128813621.1 | hypothetical protein | - |
| D1115_RS22775 () | 116650..117261 | - | 612 | WP_128813622.1 | hypothetical protein | - |
| D1115_RS22780 () | 117427..117987 | - | 561 | WP_128813623.1 | hypothetical protein | - |
| D1115_RS22785 () | 117984..118883 | - | 900 | WP_128813624.1 | hypothetical protein | - |
| D1115_RS22790 () | 118895..119263 | - | 369 | WP_128813625.1 | EamA family transporter | - |
| D1115_RS22795 () | 119260..120684 | - | 1425 | WP_128813626.1 | UbiA family prenyltransferase | - |
| D1115_RS22800 () | 120766..121704 | - | 939 | WP_128813627.1 | hypothetical protein | - |
| D1115_RS22805 () | 121701..122438 | - | 738 | WP_164837335.1 | D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase | VF |
| D1115_RS22810 () | 122422..123012 | - | 591 | WP_128813629.1 | Phosphoheptose isomerase | VF |
| D1115_RS22815 () | 123000..124028 | - | 1029 | WP_128813671.1 | D-glycero-alpha-D-manno-heptose 7-phosphate kinase | VF |
| D1115_RS22820 () | 124227..124532 | + | 306 | WP_128813630.1 | hypothetical protein | - |
| D1115_RS22825 () | 124634..125356 | + | 723 | WP_128813672.1 | Putative glycosyltransferase EpsF | VF |
| D1115_RS22830 () | 125443..125871 | + | 429 | WP_128813631.1 | hypothetical protein | - |
| D1115_RS22835 () | 126126..126755 | + | 630 | WP_128813632.1 | O-antigen ligase family protein | - |
| D1115_RS22840 () | 126757..127761 | - | 1005 | WP_128813633.1 | IS91 family transposase ISWz1 | Transposase |
| D1115_RS22845 () | 128027..128629 | - | 603 | WP_128813634.1 | hypothetical protein | - |
| D1115_RS22850 () | 129358..130671 | - | 1314 | WP_128813635.1 | Regulatory protein AtoC | VF |
| D1115_RS22855 () | 130808..131533 | - | 726 | WP_128813636.1 | ATP-binding protein | - |
| D1115_RS22860 () | 131554..132144 | - | 591 | WP_128813637.1 | hypothetical protein | - |
| D1115_RS22865 () | 132308..132607 | - | 300 | WP_128813638.1 | hypothetical protein | - |
| D1115_RS22870 () | 133072..134121 | + | 1050 | WP_164837336.1 | glycosyltransferase family 2 protein | - |
| D1115_RS22875 () | 134170..134751 | + | 582 | WP_128813640.1 | polysaccharide pyruvyl transferase family protein | - |
| D1115_RS22880 () | 135141..135791 | + | 651 | WP_164837337.1 | Putative glycosyltransferase EpsH | VF |
| D1115_RS22885 () | 136159..136935 | + | 777 | WP_128813642.1 | hypothetical protein | - |
| D1115_RS22890 () | 136944..137201 | + | 258 | WP_128813643.1 | putative glycosyltransferase EpsJ | VF |
| D1115_RS22895 () | 137439..137981 | + | 543 | WP_128813644.1 | hypothetical protein | - |
| D1115_RS22900 () | 138111..138761 | - | 651 | WP_128813645.1 | hypothetical protein | - |
| D1115_RS22905 () | 138764..139621 | - | 858 | WP_128813646.1 | oligosaccharide flippase family protein | - |
| D1115_RS22910 () | 139618..140625 | - | 1008 | WP_128813647.1 | hypothetical protein | - |
| D1115_RS22915 () | 140622..142412 | - | 1791 | WP_128813648.1 | ATP-grasp domain-containing protein | - |
| D1115_RS22920 () | 142505..143983 | - | 1479 | WP_128813649.1 | oligosaccharide flippase family protein | - |
| D1115_RS22925 () | 144037..145179 | - | 1143 | WP_128813650.1 | GNAT family N-acetyltransferase | - |
| D1115_RS22930 () | 145399..148170 | + | 2772 | WP_128813651.1 | PEP-CTERM system TPR-repeat protein PrsT | - |
| D1115_RS22935 () | 148230..148952 | + | 723 | WP_128813673.1 | serine protease | - |
| D1115_RS22940 () | 149126..149635 | + | 510 | WP_128810710.1 | IS3 family transposase ISBam1 | Transposase |
| D1115_RS22945 () | 149716..150003 | + | 288 | WP_128811126.1 | IS3 family transposase | - |
| D1115_RS23220 () | 150254..150472 | + | 219 | WP_164837338.1 | IS3 family transposase IS1664 | Transposase |
| D1115_RS22955 () | 150576..151493 | - | 918 | WP_128813653.1 | PEP-CTERM sorting domain-containing protein | - |
| D1115_RS22960 () | 151854..152705 | + | 852 | WP_164837339.1 | GGDEF domain-containing protein | - |
| D1115_RS22965 () | 152771..154411 | - | 1641 | WP_128813655.1 | electron transfer flavoprotein-ubiquinone oxidoreductase | - |
| D1115_RS22970 () | 154428..155237 | - | 810 | WP_128813656.1 | enoyl-CoA hydratase/isomerase family protein | - |
| D1115_RS22975 () | 155249..156454 | - | 1206 | WP_128813657.1 | thiolase family protein | - |
| D1115_RS22980 () | 156471..156932 | - | 462 | WP_128813658.1 | MaoC family dehydratase | - |
| D1115_RS22985 () | 156945..157730 | - | 786 | WP_128813674.1 | putative oxidoreductase | VF |
| D1115_RS22990 () | 158012..162088 | - | 4077 | WP_128813659.1 | ImpA family metalloprotease | - |
| D1115_RS22995 () | 162480..163208 | - | 729 | WP_164837340.1 | PEP-CTERM sorting domain-containing protein | - |
| D1115_RS23000 () | 163718..164353 | - | 636 | WP_128813661.1 | nuclear transport factor 2 family protein | - |
| D1115_RS23005 () | 164364..165095 | - | 732 | WP_128813662.1 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | VF |
| D1115_RS23010 () | 165111..166214 | - | 1104 | WP_128813675.1 | alkene reductase | - |
| D1115_RS23015 () | 166255..167070 | - | 816 | WP_128813663.1 | Cyclopentanol dehydrogenase | VF |
| D1115_RS23020 () | 167215..168813 | - | 1599 | WP_128813664.1 | FadD3 family acyl-CoA ligase | - |
| D1115_RS23025 () | 168843..170600 | - | 1758 | WP_128813665.1 | FAD-binding protein | - |
| D1115_RS23030 () | 170644..172354 | - | 1711 | Protein_156 | acyl--CoA ligase | - |
| D1115_RS23035 () | 172368..173456 | - | 1089 | WP_128813666.1 | MBL fold metallo-hydrolase | - |
| D1115_RS23040 () | 173705..175093 | + | 1389 | WP_128813667.1 | MFS transporter | - |
| D1115_RS23045 () | 175086..176177 | + | 1092 | WP_128813668.1 | Rieske (2Fe-2S) protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|