MGE detailed information
MGE type: Genomic_island MGE length: 17628 bp
Accession: NZ_CP032078 Location: 2946330..2963957 Organism: Escherichia coli strain CT30 Replicon: chromosome
Accession: NZ_CP032078 Location: 2946330..2963957 Organism: Escherichia coli strain CT30 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D2195_RS14145 (2941643) | 2941643..2942443 | + | 801 | WP_001027923.1 | DUF218 domain-containing protein YdcF | - |
| D2195_RS14150 (2942640) | 2942640..2944079 | + | 1440 | WP_000115962.1 | aldehyde dehydrogenase | - |
| D2195_RS14155 (2944120) | 2944120..2945121 | - | 1002 | WP_000048661.1 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
| D2195_RS14160 (2945310) | 2945310..2945840 | + | 531 | WP_001317803.1 | cytochrome b561 | - |
| D2195_RS14165 (2946085) | 2946085..2946258 | + | 174 | WP_000731852.1 | hypothetical protein | - |
| D2195_RS26105 (2946284) | 2946284..2946352 | + | 69 | WP_212591405.1 | hypothetical protein | - |
| D2195_RS14170 (2946330) | 2946330..2946461 | - | 132 | WP_228940733.1 | type I toxin-antitoxin system Hok family toxin | - |
| D2195_RS26230 (2946400) | 2946400..2946537 | - | 138 | Protein_2807 | hypothetical protein | - |
| D2195_RS14175 (2946878) | 2946878..2948518 | + | 1641 | WP_001098589.1 | hypothetical protein | VF |
| D2195_RS14180 (2948556) | 2948556..2949479 | - | 924 | WP_001317805.1 | LysR substrate-binding domain-containing protein | - |
| D2195_RS14185 (2949696) | 2949696..2951039 | + | 1344 | WP_000013808.1 | VOC family protein | - |
| D2195_RS14190 (2951264) | 2951264..2952919 | + | 1656 | WP_000375968.1 | glucan biosynthesis protein OpgD | - |
| D2195_RS14195 (2953226) | 2953226..2954434 | + | 1209 | WP_021112574.1 | IS4 family transposase IS10R | Transposase |
| D2195_RS14200 (2954409) | 2954409..2954621 | + | 213 | WP_089614512.1 | YdcH family protein | - |
| D2195_RS14205 (2954684) | 2954684..2955223 | + | 540 | WP_001317807.1 | 50S ribosomal protein L7/L12-serine acetyltransferase | - |
| D2195_RS14210 (2955215) | 2955215..2956195 | - | 981 | WP_077520937.1 | YdcK family protein | - |
| D2195_RS14215 (2956319) | 2956319..2957311 | + | 993 | WP_001317808.1 | dicarboxylate transporter/tellurite-resistance protein TehA | - |
| D2195_RS14220 (2957308) | 2957308..2957901 | + | 594 | WP_000586735.1 | tellurite resistance methyltransferase TehB | - |
| D2195_RS14225 (2958240) | 2958240..2958908 | + | 669 | WP_001261034.1 | DUF3313 domain-containing protein | - |
| D2195_RS14230 (2958943) | 2958943..2960154 | - | 1212 | WP_071593090.1 | BenE family transporter YdcO | - |
| D2195_RS14235 (2960207) | 2960207..2960743 | + | 537 | WP_000429147.1 | DNA-binding transcriptional regulator SutR | - |
| D2195_RS14240 (2960816) | 2960816..2962777 | + | 1962 | WP_001317809.1 | 23S rRNA 5-hydroxycytidine C2501 synthase | - |
| D2195_RS14245 (2962869) | 2962869..2963099 | - | 231 | WP_000494243.1 | YncJ family protein | - |
| D2195_RS14250 (2963321) | 2963321..2963497 | + | 177 | WP_000813796.1 | type II toxin-antitoxin system mRNA interferase toxin HicA | Toxin Detail |
| D2195_RS14255 (2963541) | 2963541..2963957 | + | 417 | WP_076838470.1 | type II toxin-antitoxin system antitoxin HicB | Antitoxin Detail |
| D2195_RS14260 (2964036) | 2964036..2965442 | + | 1407 | WP_000760605.1 | PLP-dependent aminotransferase family protein | - |
| D2195_RS14265 (2965687) | 2965687..2966832 | + | 1146 | WP_000047448.1 | ABC transporter substrate-binding protein | - |
| D2195_RS14270 (2966850) | 2966850..2967863 | + | 1014 | WP_000220433.1 | ABC transporter ATP-binding protein | - |
| D2195_RS14275 (2967864) | 2967864..2968805 | + | 942 | WP_001251307.1 | ABC transporter permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|