MGE detailed information
MGE type: Genomic_island MGE length: 20971 bp
Accession: NZ_CP032073 Location: 611894..632864 Organism: Escherichia coli strain CT29 Replicon: chromosome
Accession: NZ_CP032073 Location: 611894..632864 Organism: Escherichia coli strain CT29 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D2194_RS02965 (607386) | 607386..607781 | - | 396 | WP_000246830.1 | YraN family protein | - |
| D2194_RS02970 (607739) | 607739..609775 | - | 2037 | WP_000249103.1 | penicillin-binding protein activator LpoA | - |
| D2194_RS02975 (609840) | 609840..610700 | + | 861 | WP_000809262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| D2194_RS02980 (610743) | 610743..611744 | - | 1002 | Protein_592 | fimbrial protein | - |
| D2194_RS02985 (611894) | 611894..612874 | - | 981 | WP_000019450.1 | IS5 family transposase ISKpn26 | Transposase |
| D2194_RS02990 (612941) | 612941..613648 | - | 708 | Protein_594 | tagatose-bisphosphate aldolase subunit KbaY | - |
| D2194_RS02995 (613661) | 613661..614815 | - | 1155 | WP_001125706.1 | AgaS family sugar isomerase | - |
| D2194_RS03000 (615166) | 615166..616299 | - | 1134 | WP_186185590.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
| D2194_RS03005 (616296) | 616296..616730 | - | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
| D2194_RS03010 (616748) | 616748..617626 | - | 879 | WP_180469662.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| D2194_RS03015 (617616) | 617616..618395 | - | 780 | WP_212403236.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| D2194_RS03020 (618406) | 618406..618879 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| D2194_RS03025 (618902) | 618902..620182 | - | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| D2194_RS03030 (620431) | 620431..621240 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| D2194_RS03035 (621295) | 621295..621759 | - | 465 | WP_180469665.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| D2194_RS03040 (621759) | 621759..622094 | - | 336 | WP_212403239.1 | type II toxin-antitoxin system PrlF family antitoxin | Antitoxin Detail |
| D2194_RS03045 (622243) | 622243..623814 | - | 1572 | WP_032181387.1 | galactarate dehydratase | - |
| D2194_RS03050 (624189) | 624189..625523 | + | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| D2194_RS03055 (625539) | 625539..626309 | + | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| D2194_RS03060 (626339) | 626339..627229 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| D2194_RS03065 (627326) | 627326..628471 | + | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| D2194_RS03075 (629388) | 629388..630576 | - | 1189 | Protein_610 | YhaC family protein | - |
| D2194_RS03080 (630598) | 630598..631137 | - | 540 | WP_000675733.1 | protein YhaB | - |
| D2194_RS03085 (631393) | 631393..631611 | - | 219 | WP_212403241.1 | transcriptional activator TdcR | - |
| D2194_RS03090 (631926) | 631926..632864 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| D2194_RS03095 (632963) | 632963..633952 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| D2194_RS03100 (633974) | 633974..635305 | + | 1332 | WP_000107721.1 | threonine/serine transporter TdcC | - |
| D2194_RS03105 (635331) | 635331..636539 | + | 1209 | WP_001300401.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|