MGE detailed information
MGE type: Prophage MGE length: 51281 bp
Accession: NZ_CP032073 Location: 4206023..4257303 Organism: Escherichia coli strain CT29 Replicon: chromosome
Accession: NZ_CP032073 Location: 4206023..4257303 Organism: Escherichia coli strain CT29 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D2194_RS20265 (4201870) | 4201870..4202226 | - | 357 | WP_000155657.1 | MmcQ/YjbR family DNA-binding protein | - |
| D2194_RS20270 (4202230) | 4202230..4202646 | - | 417 | WP_000270375.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| D2194_RS20275 (4202757) | 4202757..4203470 | - | 714 | WP_077477728.1 | acid phosphatase AphA | - |
| D2194_RS20280 (4203872) | 4203872..4204075 | + | 204 | WP_001321562.1 | protein YjbS | - |
| D2194_RS20285 (4204577) | 4204577..4205770 | - | 1194 | WP_000486988.1 | aromatic amino acid transaminase | - |
| D2194_RS20290 (4206023) | 4206023..4207102 | - | 1080 | WP_001147328.1 | alanine racemase | - |
| D2194_RS20295 (4207155) | 4207155..4208570 | - | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| D2194_RS20300 (4208653) | 4208653..4209636 | + | 984 | WP_000235522.1 | hypothetical protein | VF |
| D2194_RS20305 (4209802) | 4209802..4210044 | - | 243 | WP_077477730.1 | envelope stress response protein PspG | - |
| D2194_RS20310 (4210178) | 4210178..4211215 | - | 1038 | WP_000543829.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| D2194_RS20315 (4211304) | 4211304..4212401 | + | 1098 | WP_001514812.1 | hypothetical protein ; Integrase | Integrase |
| D2194_RS20320 (4212463) | 4212463..4212711 | + | 249 | WP_001514811.1 | DinI-like family protein | - |
| D2194_RS20325 (4213060) | 4213060..4213755 | + | 696 | WP_001514810.1 | DUF4145 domain-containing protein | - |
| D2194_RS20330 (4213782) | 4213782..4214185 | - | 404 | Protein_4019 | recombinase family protein | - |
| D2194_RS20335 (4214295) | 4214295..4214846 | + | 552 | WP_016244976.1 | ATP-dependent Clp protease proteolytic subunit | - |
| D2194_RS20340 (4214892) | 4214892..4215034 | + | 143 | Protein_4021 | tail fiber assembly protein | - |
| D2194_RS20345 (4215006) | 4215006..4215413 | - | 408 | WP_032277774.1 | tail fiber assembly protein | - |
| D2194_RS20350 (4215413) | 4215413..4216342 | - | 930 | WP_112920490.1 | carbohydrate kinase | - |
| D2194_RS20355 (4216346) | 4216346..4216930 | - | 585 | WP_061326800.1 | YmfQ family protein | - |
| D2194_RS20360 (4216921) | 4216921..4217979 | - | 1059 | WP_038977179.1 | baseplate J/gp47 family protein | - |
| D2194_RS20365 (4217966) | 4217966..4218391 | - | 426 | WP_000424732.1 | phage GP46 family protein | - |
| D2194_RS20370 (4218391) | 4218391..4218939 | - | 549 | WP_001259067.1 | phage baseplate assembly protein V | - |
| D2194_RS20375 (4218939) | 4218939..4220018 | - | 1080 | WP_000999510.1 | baseplate protein | - |
| D2194_RS20380 (4220015) | 4220015..4221388 | - | 1374 | WP_212403146.1 | DNA circularization N-terminal domain-containing protein | - |
| D2194_RS20385 (4221445) | 4221445..4221933 | - | 489 | WP_000738065.1 | hypothetical protein | - |
| D2194_RS20390 (4221998) | 4221998..4223899 | - | 1902 | WP_000774665.1 | phage tail tape measure protein | - |
| D2194_RS20395 (4223984) | 4223984..4224307 | - | 324 | WP_000571713.1 | phage tail assembly protein | - |
| D2194_RS20400 (4224304) | 4224304..4224660 | - | 357 | WP_000090993.1 | phage tail tube protein | - |
| D2194_RS20405 (4224660) | 4224660..4226156 | - | 1497 | WP_047400076.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| D2194_RS20410 (4226140) | 4226140..4226310 | - | 171 | WP_032281340.1 | DUF2635 domain-containing protein | - |
| D2194_RS20415 (4226319) | 4226319..4226879 | - | 561 | WP_163454855.1 | hypothetical protein | - |
| D2194_RS20420 (4226876) | 4226876..4227382 | - | 507 | WP_000224836.1 | hypothetical protein | - |
| D2194_RS20425 (4227357) | 4227357..4227767 | - | 411 | WP_059346605.1 | phage head closure protein | - |
| D2194_RS20430 (4227764) | 4227764..4228087 | - | 324 | WP_000927719.1 | head-tail connector protein | - |
| D2194_RS20435 (4228090) | 4228090..4228290 | - | 201 | WP_000601357.1 | hypothetical protein | - |
| D2194_RS20440 (4228340) | 4228340..4229545 | - | 1206 | WP_046076246.1 | phage major capsid protein | - |
| D2194_RS20445 (4229560) | 4229560..4230210 | - | 651 | WP_212403148.1 | HK97 family phage prohead protease | - |
| D2194_RS20450 (4230188) | 4230188..4231429 | - | 1242 | WP_000466255.1 | phage portal protein | - |
| D2194_RS20455 (4231429) | 4231429..4231611 | - | 183 | WP_000605606.1 | protein YmfR | - |
| D2194_RS20460 (4231623) | 4231623..4233356 | - | 1734 | WP_000088160.1 | terminase large subunit | - |
| D2194_RS20465 (4233353) | 4233353..4233847 | - | 495 | WP_000929173.1 | phage terminase small subunit P27 family | - |
| D2194_RS20470 (4233973) | 4233973..4234323 | - | 351 | WP_185229766.1 | HNH endonuclease signature motif containing protein | - |
| D2194_RS20475 (4234486) | 4234486..4234866 | - | 381 | WP_000999674.1 | Gp49 family protein | - |
| D2194_RS20480 (4235151) | 4235151..4235408 | - | 258 | WP_185229765.1 | hypothetical protein | - |
| D2194_RS20485 (4235405) | 4235405..4235902 | - | 498 | WP_000839225.1 | KilA-N domain-containing protein | - |
| D2194_RS20490 (4236104) | 4236104..4236565 | - | 462 | WP_016064004.1 | lysis protein | - |
| D2194_RS20495 (4236549) | 4236549..4237025 | - | 477 | WP_212403150.1 | glycoside hydrolase family protein | - |
| D2194_RS20500 (4237029) | 4237029..4237355 | - | 327 | WP_001120490.1 | phage holin, lambda family | - |
| D2194_RS20505 (4237432) | 4237432..4238484 | - | 1053 | WP_121855893.1 | site-specific DNA-methyltransferase | - |
| D2194_RS20510 (4238635) | 4238635..4238838 | - | 204 | WP_000917724.1 | hypothetical protein | - |
| D2194_RS20515 (4239091) | 4239091..4239843 | - | 753 | WP_212403152.1 | antitermination protein | - |
| D2194_RS20520 (4239857) | 4239857..4240846 | - | 990 | WP_151577561.1 | DUF968 domain-containing protein | - |
| D2194_RS20525 (4240854) | 4240854..4241663 | - | 810 | WP_001061444.1 | KilA-N domain-containing protein | - |
| D2194_RS20530 (4241683) | 4241683..4242072 | - | 390 | WP_032279272.1 | RusA family crossover junction endodeoxyribonuclease | - |
| D2194_RS20535 (4242069) | 4242069..4242395 | - | 327 | WP_000210155.1 | LexA family transcriptional regulator | - |
| D2194_RS20540 (4242392) | 4242392..4243045 | - | 654 | WP_024249645.1 | phage N-6-adenine-methyltransferase | - |
| D2194_RS20545 (4243045) | 4243045..4243539 | - | 495 | WP_072126958.1 | PerC family transcriptional regulator | - |
| D2194_RS20550 (4243536) | 4243536..4244528 | - | 993 | WP_000054957.1 | hypothetical protein | - |
| D2194_RS20555 (4244485) | 4244485..4244697 | - | 213 | WP_001250270.1 | DUF4222 domain-containing protein | - |
| D2194_RS20560 (4244873) | 4244873..4245424 | - | 552 | WP_212403155.1 | protein YmfL | - |
| D2194_RS20565 (4245417) | 4245417..4245677 | - | 261 | WP_001191669.1 | helix-turn-helix transcriptional regulator | - |
| D2194_RS20570 (4245775) | 4245775..4246467 | + | 693 | WP_001345148.1 | helix-turn-helix transcriptional regulator | - |
| D2194_RS20575 (4247168) | 4247168..4247530 | + | 363 | WP_000135682.1 | protein YfdP | - |
| D2194_RS20580 (4247596) | 4247596..4248420 | + | 825 | WP_000081316.1 | DUF2303 family protein | - |
| D2194_RS20585 (4248549) | 4248549..4249085 | + | 537 | WP_000008209.1 | 5'-deoxynucleotidase | - |
| D2194_RS20590 (4249076) | 4249076..4249438 | + | 363 | WP_212403157.1 | hypothetical protein | - |
| D2194_RS20595 (4249438) | 4249438..4250247 | + | 810 | WP_212403159.1 | hypothetical protein | - |
| D2194_RS20600 (4250247) | 4250247..4250819 | + | 573 | WP_001061348.1 | 3'-5' exonuclease | - |
| D2194_RS20605 (4250856) | 4250856..4251137 | + | 282 | WP_001093917.1 | pyocin activator PrtN family protein | - |
| D2194_RS20610 (4251185) | 4251185..4251358 | - | 174 | WP_000390072.1 | hypothetical protein | - |
| D2194_RS20615 (4251398) | 4251398..4251784 | - | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| D2194_RS20620 (4251814) | 4251814..4252323 | - | 510 | WP_001339382.1 | Panacea domain-containing protein | Antitoxin Detail |
| D2194_RS20625 (4252640) | 4252640..4252744 | - | 105 | Protein_4078 | tRNA-dihydrouridine synthase | - |
| D2194_RS20630 (4253105) | 4253105..4253851 | - | 747 | WP_285899689.1 | DUF2713 family protein | - |
| D2194_RS23930 (4253846) | 4253846..4254097 | - | 252 | Protein_4080 | DUF2713 domain-containing protein | - |
| D2194_RS20635 (4254415) | 4254415..4254930 | + | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| D2194_RS20640 (4254972) | 4254972..4255181 | - | 210 | Protein_4082 | CsbD family protein | - |
| D2194_RS20645 (4255297) | 4255297..4256622 | - | 1326 | WP_001326646.1 | MATE family efflux transporter DinF | - |
| D2194_RS20650 (4256695) | 4256695..4257303 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| D2194_RS20655 (4257413) | 4257413..4257781 | - | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| D2194_RS20660 (4257952) | 4257952..4260375 | + | 2424 | WP_000017354.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| D2194_RS20665 (4260530) | 4260530..4261402 | - | 873 | WP_000455227.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| D2194_RS20670 (4261415) | 4261415..4261912 | - | 498 | WP_001326644.1 | chorismate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|