MGE detailed information
MGE type: Genomic_island MGE length: 33322 bp
Accession: NZ_CP032073 Location: 3604758..3638079 Organism: Escherichia coli strain CT29 Replicon: chromosome
Accession: NZ_CP032073 Location: 3604758..3638079 Organism: Escherichia coli strain CT29 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D2194_RS17380 (3600261) | 3600261..3600662 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3601380) | 3601380..3601460 | - | 81 | NuclAT_9 | - | - |
| - (3601380) | 3601380..3601460 | - | 81 | NuclAT_9 | - | - |
| - (3601380) | 3601380..3601460 | - | 81 | NuclAT_9 | - | - |
| - (3601380) | 3601380..3601460 | - | 81 | NuclAT_9 | - | - |
| D2194_RS17385 (3600720) | 3600720..3601964 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| D2194_RS17390 (3602056) | 3602056..3602514 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| D2194_RS17395 (3602775) | 3602775..3604232 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| D2194_RS17400 (3604289) | 3604289..3604810 | - | 522 | Protein_3443 | peptide chain release factor H | - |
| D2194_RS17405 (3604809) | 3604809..3605012 | - | 204 | Protein_3444 | RtcB family protein | - |
| D2194_RS17410 (3605258) | 3605258..3605710 | - | 453 | WP_180759961.1 | GNAT family N-acetyltransferase | - |
| D2194_RS17415 (3605720) | 3605720..3606118 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| D2194_RS17420 (3606121) | 3606121..3606414 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| D2194_RS17425 (3606466) | 3606466..3607521 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| D2194_RS17430 (3607592) | 3607592..3608377 | - | 786 | WP_000207564.1 | hypothetical protein | VF |
| D2194_RS17435 (3608349) | 3608349..3610061 | + | 1713 | Protein_3450 | hypothetical protein | VF |
| D2194_RS17440 (3610285) | 3610285..3610782 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| D2194_RS17445 (3610958) | 3610958..3611731 | - | 774 | WP_001355630.1 | hypothetical protein | VF |
| D2194_RS17450 (3611917) | 3611917..3612177 | + | 261 | WP_112929879.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| D2194_RS17455 (3612180) | 3612180..3612449 | + | 270 | Protein_3454 | type II toxin-antitoxin system YafQ family toxin | - |
| D2194_RS17460 (3612605) | 3612605..3613345 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| D2194_RS17465 (3613316) | 3613316..3614083 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| D2194_RS17470 (3614289) | 3614289..3614867 | - | 579 | WP_000284050.1 | hypothetical protein | VF |
| D2194_RS17475 (3615107) | 3615107..3617551 | + | 2445 | WP_000973083.1 | hypothetical protein | VF |
| D2194_RS17480 (3617594) | 3617594..3618040 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| D2194_RS17485 (3618221) | 3618221..3618991 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| D2194_RS17490 (3619032) | 3619032..3619193 | - | 162 | Protein_3461 | ISAs1 family transposase | - |
| D2194_RS17495 (3619208) | 3619208..3619905 | - | 698 | Protein_3462 | IS1-like element IS1B family transposase | - |
| D2194_RS17500 (3619959) | 3619959..3620777 | + | 819 | Protein_3463 | type I restriction endonuclease subunit M | - |
| D2194_RS17505 (3620774) | 3620774..3622093 | + | 1320 | WP_097329752.1 | restriction endonuclease subunit S | - |
| D2194_RS17510 (3622106) | 3622106..3623572 | + | 1467 | WP_033802991.1 | DUF262 domain-containing protein | - |
| D2194_RS17515 (3623565) | 3623565..3625601 | + | 2037 | WP_251380168.1 | DUF262 domain-containing protein | - |
| D2194_RS17520 (3625594) | 3625594..3628686 | + | 3093 | WP_113418007.1 | type I restriction endonuclease subunit R | - |
| D2194_RS17525 (3628686) | 3628686..3629399 | + | 714 | WP_033802999.1 | SprT family zinc-dependent metalloprotease | - |
| D2194_RS17530 (3629494) | 3629494..3630366 | + | 873 | WP_113418005.1 | 50S ribosome-binding GTPase | - |
| D2194_RS17535 (3630458) | 3630458..3630883 | + | 426 | WP_033802995.1 | antirestriction protein | - |
| D2194_RS17540 (3630943) | 3630943..3631779 | + | 837 | WP_033802996.1 | DUF932 domain-containing protein | - |
| D2194_RS17545 (3632407) | 3632407..3633141 | + | 735 | WP_112044116.1 | OmpW family outer membrane protein | - |
| D2194_RS17550 (3633284) | 3633284..3634147 | + | 864 | WP_212403092.1 | hypothetical protein | - |
| D2194_RS17555 (3634140) | 3634140..3634532 | + | 393 | WP_036967295.1 | hypothetical protein | - |
| D2194_RS17560 (3634529) | 3634529..3634891 | + | 363 | WP_113418002.1 | hypothetical protein | - |
| D2194_RS17570 (3635308) | 3635308..3636039 | - | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| D2194_RS17575 (3636104) | 3636104..3636571 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| D2194_RS17580 (3636568) | 3636568..3637290 | - | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| D2194_RS17585 (3637324) | 3637324..3638079 | + | 756 | WP_001052709.1 | hydroxyacylglutathione hydrolase | - |
| D2194_RS17590 (3638151) | 3638151..3639509 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| D2194_RS17595 (3639557) | 3639557..3640153 | - | 597 | Protein_3481 | methyltransferase domain-containing protein | - |
| D2194_RS17600 (3640184) | 3640184..3640984 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| D2194_RS17605 (3641225) | 3641225..3642139 | + | 915 | WP_000648572.1 | DNA-binding transcriptional regulator YafC | - |
| D2194_RS17610 (3642136) | 3642136..3642939 | - | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|