MGE detailed information
MGE type: Mobilizable plasmid MGE length: 63623 bp
Accession: NZ_CP032069 Location: 1..63623 Organism: Escherichia coli strain E166 Replicon: plasmid p.E166-P3
Accession: NZ_CP032069 Location: 1..63623 Organism: Escherichia coli strain E166 Replicon: plasmid p.E166-P3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D2J89_RS25120 (D2J89_27220) | 671..1123 | + | 453 | WP_000101553.1 | CaiF/GrlA family transcriptional regulator | - |
| D2J89_RS25125 (D2J89_27225) | 1116..1310 | + | 195 | WP_000049865.1 | DUF1187 family protein | - |
| D2J89_RS25130 (D2J89_27230) | 1356..2309 | + | 954 | WP_072105959.1 | SPFH domain-containing protein | - |
| D2J89_RS25135 (D2J89_27235) | 2382..2825 | + | 444 | WP_000964840.1 | NfeD family protein | - |
| D2J89_RS25140 | 2829..2999 | + | 171 | WP_000550721.1 | hypothetical protein | - |
| D2J89_RS25145 (D2J89_27240) | 3010..3672 | + | 663 | WP_001419740.1 | hypothetical protein | - |
| D2J89_RS25150 (D2J89_27250) | 3820..4071 | + | 252 | WP_015387362.1 | hypothetical protein | - |
| D2J89_RS25155 (D2J89_27255) | 4087..4389 | + | 303 | WP_001360345.1 | hypothetical protein | - |
| D2J89_RS25160 (D2J89_27260) | 4386..4643 | + | 258 | WP_000739144.1 | hypothetical protein | - |
| D2J89_RS25165 (D2J89_27265) | 4647..5633 | + | 987 | WP_001419739.1 | type IV secretion system protein | - |
| D2J89_RS25170 (D2J89_27270) | 5639..6286 | + | 648 | WP_001419738.1 | hypothetical protein | VF |
| D2J89_RS25175 (D2J89_27275) | 6290..6526 | + | 237 | WP_000750964.1 | EexN family lipoprotein | - |
| D2J89_RS25180 (D2J89_27280) | 6573..7382 | - | 810 | WP_001419737.1 | DUF5710 domain-containing protein | - |
| D2J89_RS25185 (D2J89_27285) | 7430..8062 | + | 633 | WP_001419736.1 | hypothetical protein | - |
| D2J89_RS25190 (D2J89_27290) | 8129..8428 | + | 300 | WP_000835763.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| D2J89_RS25195 (D2J89_27295) | 8431..9666 | + | 1236 | WP_001419735.1 | hypothetical protein | VF |
| D2J89_RS25200 (D2J89_27300) | 9672..10109 | + | 438 | WP_015387358.1 | type IV pilus biogenesis protein PilM | - |
| D2J89_RS25205 (D2J89_27305) | 10449..10847 | + | 399 | WP_001708012.1 | hypothetical protein | - |
| D2J89_RS25210 (D2J89_27310) | 10868..11452 | + | 585 | WP_001401693.1 | Type IV secretion system protein virB1 | VF |
| D2J89_RS26000 | 11452..11742 | + | 291 | WP_000865479.1 | conjugal transfer protein | - |
| D2J89_RS25220 (D2J89_27320) | 11813..12133 | + | 321 | WP_000362081.1 | VirB3 family type IV secretion system protein | - |
| D2J89_RS25225 (D2J89_27325) | 12139..14496 | + | 2358 | WP_015387356.1 | VirB4 family type IV secretion system protein | - |
| D2J89_RS25230 (D2J89_27335) | 14660..15394 | + | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| D2J89_RS25235 (D2J89_27340) | 15391..16161 | + | 771 | WP_015387355.1 | Type IV secretion system protein PtlF | VF |
| D2J89_RS25240 (D2J89_27345) | 16151..17290 | + | 1140 | WP_015387354.1 | Type IV secretion system protein virB10 | VF |
| D2J89_RS25245 (D2J89_27350) | 17309..18364 | + | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| D2J89_RS25250 (D2J89_27355) | 18380..20338 | + | 1959 | WP_000338974.1 | type IV secretory system conjugative DNA transfer family protein | - |
| D2J89_RS25255 (D2J89_27360) | 20385..20903 | + | 519 | WP_015387353.1 | YfdA protein | - |
| D2J89_RS25260 (D2J89_27365) | 20896..22539 | + | 1644 | WP_001035590.1 | Outer membrane lipoprotein BfpB | VF |
| D2J89_RS25265 (D2J89_27370) | 22590..23900 | + | 1311 | WP_001420476.1 | type 4b pilus protein PilO2 | - |
| D2J89_RS25270 (D2J89_27375) | 23884..24378 | + | 495 | WP_000912551.1 | type IV pilus biogenesis protein PilP | - |
| D2J89_RS25275 (D2J89_27380) | 24403..25941 | + | 1539 | WP_001420475.1 | Type II secretion system protein E | VF |
| D2J89_RS25280 (D2J89_27385) | 25932..27041 | + | 1110 | WP_000974900.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| D2J89_RS25285 (D2J89_27390) | 27086..27643 | + | 558 | WP_000095051.1 | type 4 pilus major pilin | - |
| D2J89_RS25290 (D2J89_27395) | 27710..28192 | + | 483 | WP_001258095.1 | hypothetical protein | VF |
| D2J89_RS25295 (D2J89_27400) | 28196..28831 | + | 636 | WP_000934978.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| D2J89_RS25300 (D2J89_27405) | 28844..30088 | + | 1245 | WP_015387351.1 | hypothetical protein | VF |
| D2J89_RS25305 (D2J89_27425) | 31078..32202 | + | 1125 | WP_000486719.1 | site-specific integrase | - |
| D2J89_RS25310 (D2J89_27430) | 32214..32867 | + | 654 | WP_015387348.1 | hypothetical protein | - |
| D2J89_RS25315 (D2J89_27435) | 32914..33432 | + | 519 | WP_000698399.1 | thermonuclease family protein | - |
| D2J89_RS25320 (D2J89_27440) | 33448..33852 | + | 405 | WP_001218543.1 | hypothetical protein | - |
| D2J89_RS25325 (D2J89_27450) | 34216..34803 | + | 588 | WP_015387347.1 | DUF6012 family protein | - |
| D2J89_RS25330 (D2J89_27455) | 34815..36980 | + | 2166 | WP_034169408.1 | type IA DNA topoisomerase | - |
| D2J89_RS25335 (D2J89_27460) | 37049..37255 | + | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| D2J89_RS25340 | 37601..38041 | + | 441 | WP_000666084.1 | hypothetical protein | - |
| D2J89_RS25345 (D2J89_27470) | 38000..38773 | - | 774 | WP_052234578.1 | PAP2 family protein | - |
| D2J89_RS25350 (D2J89_27475) | 38845..40470 | - | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| D2J89_RS25355 (D2J89_27480) | 40691..45004 | - | 4314 | WP_144745853.1 | relaxase | - |
| D2J89_RS25360 (D2J89_27485) | 45001..45342 | - | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| D2J89_RS25365 (D2J89_27490) | 45711..46112 | + | 402 | WP_000717860.1 | hypothetical protein | - |
| D2J89_RS25370 (D2J89_27495) | 46130..46882 | + | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| D2J89_RS25375 (D2J89_27500) | 46884..47591 | + | 708 | WP_000108796.1 | hypothetical protein | - |
| D2J89_RS26005 | 47611..47733 | + | 123 | Protein_52 | hypothetical protein | - |
| D2J89_RS25385 (D2J89_27510) | 48032..48295 | + | 264 | WP_000224227.1 | hypothetical protein | - |
| D2J89_RS25390 | 48332..48510 | + | 179 | Protein_54 | hypothetical protein | - |
| D2J89_RS25395 (D2J89_27520) | 48844..49164 | + | 321 | WP_001310435.1 | hypothetical protein | - |
| D2J89_RS25400 (D2J89_27525) | 49295..49732 | - | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| D2J89_RS25405 (D2J89_27530) | 49757..49939 | - | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| D2J89_RS26010 | 50236..50679 | + | 444 | WP_000192626.1 | hypothetical protein | - |
| D2J89_RS25415 (D2J89_27540) | 51101..51394 | - | 294 | WP_000954637.1 | hypothetical protein | - |
| D2J89_RS25420 (D2J89_27545) | 51409..51783 | - | 375 | WP_015387341.1 | hypothetical protein | - |
| D2J89_RS25425 (D2J89_27550) | 51835..52122 | - | 288 | WP_000673430.1 | hypothetical protein | - |
| D2J89_RS25430 (D2J89_27555) | 52254..52472 | - | 219 | WP_154101533.1 | hypothetical protein | - |
| D2J89_RS25435 (D2J89_27560) | 52872..54134 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| D2J89_RS25440 (D2J89_27565) | 54387..55262 | + | 876 | WP_032492042.1 | Beta-lactamase CTX-M-1 | ARG |
| D2J89_RS25445 (D2J89_27570) | 55309..55653 | - | 345 | Protein_65 | WbuC family cupin fold metalloprotein | - |
| D2J89_RS25450 (D2J89_27575) | 55778..56020 | - | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| D2J89_RS25455 (D2J89_27580) | 56017..56271 | - | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| D2J89_RS25460 (D2J89_27585) | 56268..56810 | - | 543 | WP_001083904.1 | hypothetical protein | - |
| D2J89_RS25465 (D2J89_27590) | 56914..57429 | - | 516 | WP_001025393.1 | J domain-containing protein | - |
| D2J89_RS25470 (D2J89_27600) | 57833..58162 | - | 330 | WP_000855119.1 | hypothetical protein | - |
| D2J89_RS25475 (D2J89_27605) | 58294..58512 | - | 219 | WP_159183630.1 | hypothetical protein | - |
| D2J89_RS25480 (D2J89_27610) | 58749..59414 | + | 666 | WP_015387337.1 | division plane positioning ATPase MipZ | - |
| D2J89_RS25485 | 59488..59772 | + | 285 | WP_001162371.1 | hypothetical protein | - |
| D2J89_RS25490 (D2J89_27620) | 59790..60386 | - | 597 | WP_000125165.1 | ProQ/FINO family protein | - |
| D2J89_RS25495 (D2J89_27625) | 60535..60657 | - | 123 | WP_223202818.1 | Hok/Gef family protein | - |
| D2J89_RS26015 | 60602..60754 | - | 153 | Protein_76 | DUF5431 family protein | - |
| D2J89_RS25500 | 60890..61051 | - | 162 | WP_001128311.1 | hypothetical protein | - |
| D2J89_RS25505 (D2J89_27640) | 62100..63128 | - | 1029 | WP_024172575.1 | plasmid replication initiator RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|