MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 95228 bp
Accession: NZ_CP031917 Location: 1..95228 Organism: Escherichia coli O45:H2 strain FWSEC0003 Replicon: plasmid unnamed11
Accession: NZ_CP031917 Location: 1..95228 Organism: Escherichia coli O45:H2 strain FWSEC0003 Replicon: plasmid unnamed11
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCU02_RS28440 () | 561..1166 | + | 606 | WP_169301911.1 | baseplate protein | - |
| CCU02_RS28445 () | 1226..2129 | + | 904 | Protein_2 | recombination-associated protein RdgC | - |
| CCU02_RS28450 () | 2143..2778 | + | 636 | Protein_3 | hypothetical protein | - |
| CCU02_RS28455 () | 2785..3687 | + | 903 | Protein_4 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| CCU02_RS29525 () | 3732..5388 | - | 1657 | Protein_5 | glutamine--tRNA ligase | - |
| CCU02_RS28475 () | 5657..5944 | - | 288 | WP_000595051.1 | hypothetical protein | - |
| CCU02_RS28480 () | 5937..6574 | - | 638 | Protein_7 | AAA family ATPase | - |
| CCU02_RS28485 () | 6862..7200 | - | 339 | WP_000076908.1 | plasmid stabilization protein | - |
| CCU02_RS28490 () | 7213..8130 | - | 918 | WP_136868086.1 | recombinase | - |
| CCU02_RS28495 () | 8435..8719 | + | 285 | WP_001272821.1 | alanine racemase | - |
| CCU02_RS28500 () | 8719..9523 | + | 805 | Protein_11 | hypothetical protein | - |
| CCU02_RS28505 () | 9594..10051 | + | 458 | Protein_12 | hypothetical protein | - |
| CCU02_RS28510 () | 10204..10662 | - | 459 | WP_044868477.1 | hypothetical protein | - |
| CCU02_RS28515 () | 10679..11071 | - | 393 | WP_000331486.1 | hypothetical protein | - |
| CCU02_RS28520 () | 11230..12921 | + | 1692 | Protein_15 | capsid protein | - |
| CCU02_RS28530 () | 13416..15069 | + | 1654 | Protein_16 | phage tail protein | - |
| CCU02_RS28535 () | 15110..15843 | + | 734 | Protein_17 | hypothetical protein | - |
| CCU02_RS28540 () | 15911..16482 | + | 572 | Protein_18 | hypothetical protein | - |
| CCU02_RS28545 () | 16491..16980 | + | 490 | Protein_19 | baseplate protein | - |
| CCU02_RS28550 () | 17033..17584 | + | 552 | WP_032220996.1 | hypothetical protein | - |
| CCU02_RS28555 () | 17600..18305 | + | 706 | Protein_21 | phage tail protein | - |
| CCU02_RS28560 () | 18687..19442 | - | 756 | WP_001077897.1 | RepB family plasmid replication initiator protein | - |
| CCU02_RS28565 () | 19831..20652 | + | 822 | WP_001557705.1 | hypothetical protein | - |
| CCU02_RS28570 () | 20667..24431 | + | 3765 | Protein_24 | transglycosylase | - |
| CCU02_RS28575 () | 24437..24811 | + | 375 | WP_000965099.1 | hypothetical protein | - |
| CCU02_RS28580 () | 24808..26238 | + | 1431 | WP_044868481.1 | baseplate protein | - |
| CCU02_RS28585 () | 26249..26914 | + | 666 | Protein_27 | phage tail protein | - |
| CCU02_RS28590 () | 26968..28180 | + | 1213 | Protein_28 | IS3 family transposase IS629 | Transposase |
| CCU02_RS29665 () | 28498..28944 | + | 447 | WP_000829713.1 | hypothetical protein | - |
| CCU02_RS28605 () | 28974..31062 | + | 2089 | Protein_30 | tail fiber protein | - |
| CCU02_RS28610 () | 31119..32232 | + | 1114 | Protein_31 | phage tail protein | - |
| CCU02_RS28615 () | 32234..32776 | + | 543 | WP_136868079.1 | tail fiber assembly protein | - |
| CCU02_RS28620 () | 32763..33319 | - | 557 | Protein_33 | tail fiber assembly protein | - |
| CCU02_RS28625 () | 33322..34613 | - | 1292 | Protein_34 | phage tail protein | - |
| CCU02_RS29670 () | 34683..34876 | - | 194 | Protein_35 | phage tail protein | - |
| CCU02_RS28630 () | 34879..35433 | - | 555 | Protein_36 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| CCU02_RS28635 () | 35537..35863 | + | 327 | WP_000457140.1 | holin | - |
| CCU02_RS28640 () | 35863..36307 | + | 445 | Protein_38 | lysis protein | - |
| CCU02_RS28645 () | 36297..36916 | + | 620 | Protein_39 | hypothetical protein | - |
| CCU02_RS28650 () | 36909..38821 | + | 1913 | Protein_40 | head protein | - |
| CCU02_RS28655 () | 38821..39189 | + | 369 | WP_044868351.1 | hypothetical protein | - |
| CCU02_RS28660 () | 39284..40666 | + | 1383 | Protein_42 | hypothetical protein | - |
| CCU02_RS29675 () | 40731..42400 | + | 1670 | Protein_43 | phage portal protein | - |
| CCU02_RS28680 () | 42414..43408 | + | 995 | Protein_44 | head processing protein | - |
| CCU02_RS28685 () | 43609..44095 | + | 487 | Protein_45 | lytic replication protein | - |
| CCU02_RS28695 () | 45215..45883 | + | 669 | Protein_46 | Rha family transcriptional regulator | - |
| CCU02_RS28700 () | 45887..46083 | + | 197 | Protein_47 | hypothetical protein | - |
| CCU02_RS28705 () | 46116..46601 | - | 486 | WP_001273800.1 | TIGR02594 family protein | - |
| CCU02_RS28710 () | 46743..53539 | + | 6797 | Protein_49 | DEAD/DEAH box helicase family protein | - |
| CCU02_RS28715 () | 53576..54009 | + | 434 | Protein_50 | olxA | - |
| CCU02_RS28720 () | 54012..54272 | + | 261 | WP_001230915.1 | hypothetical protein | - |
| CCU02_RS28725 () | 54606..54902 | + | 297 | WP_086252943.1 | VRR-NUC domain-containing protein | - |
| CCU02_RS28740 () | 55523..56723 | + | 1201 | Protein_53 | hypothetical protein | - |
| CCU02_RS29680 () | 59892..60467 | + | 576 | WP_000928280.1 | hypothetical protein | - |
| CCU02_RS28780 () | 60467..60859 | + | 393 | WP_000274528.1 | hypothetical protein | - |
| CCU02_RS28785 () | 60968..61360 | + | 393 | WP_000435256.1 | hypothetical protein | - |
| CCU02_RS28790 () | 61741..62717 | + | 977 | Protein_57 | DNA pacase A subunit | - |
| CCU02_RS28795 () | 62824..64224 | + | 1401 | WP_136868087.1 | terminase | - |
| CCU02_RS28805 () | 64515..65285 | - | 771 | WP_136868082.1 | hypothetical protein | - |
| CCU02_RS28810 () | 65680..66707 | + | 1028 | Protein_60 | tyrosine-type recombinase/integrase | - |
| CCU02_RS28815 () | 66817..67125 | + | 309 | WP_000349257.1 | hypothetical protein | - |
| CCU02_RS28825 () | 67548..68085 | + | 538 | Protein_62 | dUTP diphosphatase | - |
| CCU02_RS28830 () | 68278..68754 | + | 477 | WP_169301912.1 | DUF2829 domain-containing protein | - |
| CCU02_RS28835 () | 68761..69567 | + | 807 | WP_044868339.1 | hypothetical protein | - |
| CCU02_RS28840 () | 69597..70652 | + | 1056 | WP_136868083.1 | hypothetical protein | - |
| CCU02_RS28845 () | 70688..71068 | - | 381 | WP_001216042.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| CCU02_RS28850 () | 71068..71289 | - | 222 | WP_001190710.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CCU02_RS28855 () | 71362..71751 | - | 390 | WP_000506730.1 | DNA repair protein | - |
| CCU02_RS28860 () | 71982..72521 | - | 540 | WP_136868084.1 | toprim domain-containing protein | - |
| CCU02_RS28865 () | 72518..72823 | - | 306 | WP_000988220.1 | hypothetical protein | - |
| CCU02_RS28875 () | 73091..73840 | - | 750 | WP_044868336.1 | hypothetical protein | - |
| CCU02_RS28880 () | 73837..74046 | - | 210 | WP_044868334.1 | hypothetical protein | - |
| CCU02_RS28885 () | 74071..74364 | - | 294 | WP_000267996.1 | hypothetical protein | - |
| CCU02_RS28895 () | 74351..75503 | - | 1153 | Protein_74 | ASCH domain-containing protein | - |
| CCU02_RS28905 () | 75835..76013 | - | 179 | Protein_75 | hypothetical protein | - |
| CCU02_RS28910 () | 76015..76201 | - | 187 | Protein_76 | hypothetical protein | - |
| CCU02_RS28915 () | 76188..76765 | - | 578 | Protein_77 | ead/Ea22-like family protein | - |
| CCU02_RS28920 () | 76762..77406 | - | 645 | WP_136868085.1 | hypothetical protein | - |
| CCU02_RS28925 () | 77403..77642 | - | 240 | WP_001571182.1 | hypothetical protein | - |
| CCU02_RS28930 () | 77635..77837 | - | 203 | Protein_80 | hypothetical protein | - |
| CCU02_RS28935 () | 77834..78704 | - | 871 | Protein_81 | phosphoadenosine phosphosulfate reductase family protein | - |
| CCU02_RS28940 () | 78747..79739 | - | 993 | Protein_82 | DUF968 domain-containing protein | - |
| CCU02_RS28945 () | 79838..80530 | - | 693 | WP_077787214.1 | metallophosphoesterase | - |
| CCU02_RS28950 () | 80527..80838 | - | 312 | WP_000022451.1 | hypothetical protein | - |
| CCU02_RS28955 () | 80835..81059 | - | 225 | WP_000139732.1 | hypothetical protein | - |
| CCU02_RS28960 () | 81056..81331 | - | 276 | WP_001018049.1 | DUF4752 family protein | - |
| CCU02_RS28970 () | 81570..82354 | - | 785 | Protein_87 | hypothetical protein | - |
| CCU02_RS28975 () | 82363..82773 | - | 411 | WP_000738194.1 | hypothetical protein | - |
| CCU02_RS28980 () | 82770..83078 | - | 309 | Protein_89 | ead/Ea22-like family protein | - |
| CCU02_RS28985 () | 83155..83439 | - | 285 | WP_044868358.1 | DNA-binding protein | - |
| CCU02_RS28990 () | 83469..84080 | - | 612 | WP_064751994.1 | DUF4406 domain-containing protein | - |
| CCU02_RS28995 () | 84353..84930 | + | 578 | Protein_92 | recombinase | - |
| CCU02_RS29535 () | 85261..85428 | + | 168 | WP_000218499.1 | hypothetical protein | - |
| CCU02_RS29000 () | 85602..85721 | + | 120 | WP_072048885.1 | ash family protein | - |
| CCU02_RS29005 () | 85740..85955 | + | 216 | WP_044868326.1 | host cell division inhibitor Icd-like protein | - |
| CCU02_RS29010 () | 85955..86895 | + | 941 | Protein_96 | Rha family transcriptional regulator | - |
| CCU02_RS29015 () | 87023..87373 | + | 351 | WP_044868324.1 | hypothetical protein | - |
| CCU02_RS29020 () | 87415..88334 | - | 920 | Protein_98 | hypothetical protein | - |
| CCU02_RS29025 () | 88602..89255 | + | 654 | WP_000410954.1 | hypothetical protein | - |
| CCU02_RS29030 () | 89584..89912 | + | 329 | Protein_100 | baseplate protein | - |
| CCU02_RS29035 () | 89905..91105 | + | 1201 | Protein_101 | phage tail protein | - |
| CCU02_RS29040 () | 91128..91856 | - | 729 | WP_044868320.1 | hypothetical protein | - |
| CCU02_RS29045 () | 91919..92278 | - | 360 | WP_044868318.1 | transcriptional regulator | - |
| CCU02_RS29050 () | 92335..92673 | - | 339 | WP_000806445.1 | HigA family addiction module antidote protein | - |
| CCU02_RS29055 () | 92744..93046 | - | 303 | WP_000162415.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CCU02_RS29060 () | 93209..94000 | + | 792 | WP_000532307.1 | hypothetical protein | - |
| CCU02_RS29065 () | 93997..94764 | + | 768 | WP_000203295.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|