MGE detailed information
MGE type: Conjugative plasmid MGE length: 73224 bp
Accession: NZ_CP031909 Location: 1..73224 Organism: Escherichia coli O103:H2 strain FWSEC0007 Replicon: plasmid unnamed16
Accession: NZ_CP031909 Location: 1..73224 Organism: Escherichia coli O103:H2 strain FWSEC0007 Replicon: plasmid unnamed16
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCU04_RS28170 () | 1..1107 | + | 1107 | WP_000975742.1 | glycosyltransferase family 4 protein | - |
| CCU04_RS27465 () | 1197..2918 | + | 1722 | WP_000550558.1 | phosphoethanolamine transferase CptA | - |
| CCU04_RS27470 () | 2992..3990 | + | 999 | WP_077625898.1 | Lipid A biosynthesis myristoyltransferase | VF |
| CCU04_RS27475 () | 4154..4435 | + | 282 | WP_032211616.1 | transposase | - |
| CCU04_RS27490 () | 5940..6293 | + | 354 | WP_000864811.1 | colicin M immunity protein | - |
| CCU04_RS27495 () | 6343..6504 | - | 162 | Protein_7 | lipid II-degrading bacteriocin | - |
| CCU04_RS27500 () | 6696..8135 | - | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| CCU04_RS27505 () | 8139..10259 | - | 2121 | WP_000987096.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| CCU04_RS27510 () | 10309..13305 | - | 2997 | WP_000217740.1 | Hemolysin, chromosomal | VF |
| CCU04_RS27515 () | 13307..13822 | - | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| CCU04_RS27525 () | 14258..15471 | + | 1214 | WP_169301991.1 | IS3 family transposase IS629 | Transposase |
| CCU04_RS27530 () | 15516..16400 | + | 885 | Protein_13 | conjugal transfer protein TraH | - |
| CCU04_RS27535 () | 16397..19218 | + | 2822 | Protein_14 | conjugal transfer mating pair stabilization protein TraG | - |
| CCU04_RS27540 () | 19233..19736 | + | 504 | WP_000605510.1 | hypothetical protein | - |
| CCU04_RS27545 () | 19768..20499 | + | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| CCU04_RS27550 () | 20751..22904 | + | 2154 | WP_001368869.1 | type IV conjugative transfer system coupling protein TraD | - |
| CCU04_RS27555 () | 22904..28174 | + | 5271 | WP_000987003.1 | Multifunctional conjugation protein TraI | Relaxase |
| CCU04_RS27560 () | 28194..28940 | + | 747 | WP_000205763.1 | conjugal transfer pilus acetylase TraX | - |
| CCU04_RS27565 () | 28999..29859 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| CCU04_RS27570 () | 29962..30522 | + | 561 | WP_000840467.1 | fertility inhibition protein FinO | - |
| CCU04_RS27575 () | 30655..30867 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| CCU04_RS27580 () | 31112..31573 | + | 462 | WP_001233850.1 | thermonuclease family protein | - |
| CCU04_RS27585 () | 31619..31828 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| CCU04_RS27590 () | 32013..32425 | - | 413 | Protein_25 | IS3 family transposase IS911 | Transposase |
| CCU04_RS27595 () | 32547..32861 | - | 315 | WP_001435275.1 | hypothetical protein | - |
| CCU04_RS27600 () | 33233..33412 | - | 180 | WP_000526860.1 | hypothetical protein | VF |
| CCU04_RS27605 () | 33615..33989 | + | 375 | WP_001368887.1 | hypothetical protein | - |
| CCU04_RS27610 () | 34300..34461 | - | 162 | Protein_29 | epoxyqueuosine reductase QueH | - |
| CCU04_RS27615 () | 34512..34652 | + | 141 | Protein_30 | serine/threonine protein kinase | - |
| CCU04_RS27620 () | 34776..35516 | + | 741 | WP_001066926.1 | IS91 family transposase ISMno23 | Transposase |
| CCU04_RS27625 () | 35800..36777 | - | 978 | WP_000361617.1 | RepB family plasmid replication initiator protein | - |
| CCU04_RS27635 () | 37423..37828 | - | 406 | Protein_33 | DDE-type integrase/transposase/recombinase | - |
| CCU04_RS27640 () | 37830..38117 | - | 288 | WP_001270421.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CCU04_RS27645 () | 38114..38365 | - | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CCU04_RS28080 () | 38539..38712 | - | 174 | WP_001435278.1 | hypothetical protein | - |
| CCU04_RS27660 () | 39083..40288 | + | 1206 | WP_000817643.1 | Plasmid partition protein A | VF |
| CCU04_RS27665 () | 40285..41247 | + | 963 | WP_000756329.1 | ParB/RepB/Spo0J family partition protein | - |
| CCU04_RS27670 () | 41388..42550 | - | 1163 | Protein_39 | DUF4113 domain-containing protein | - |
| CCU04_RS27675 () | 42431..42848 | + | 418 | Protein_40 | DUF1281 domain-containing protein | - |
| CCU04_RS27680 () | 42852..43157 | + | 306 | WP_032162675.1 | hypothetical protein | - |
| CCU04_RS27690 () | 43234..43917 | + | 684 | WP_000085940.1 | DNA methylase | - |
| CCU04_RS27695 () | 43918..44139 | + | 222 | WP_001104880.1 | hypothetical protein | - |
| CCU04_RS27700 () | 44151..44585 | + | 435 | WP_000274488.1 | DUF1380 family protein | - |
| CCU04_RS28175 () | 44631..45407 | + | 777 | WP_001005019.1 | hypothetical protein | - |
| CCU04_RS27715 () | 45947..46225 | + | 279 | WP_072131700.1 | antirestriction protein | - |
| CCU04_RS27720 () | 46272..46694 | + | 423 | WP_000271758.1 | DUF1380 family protein | - |
| CCU04_RS27725 () | 46691..46882 | + | 192 | WP_001024839.1 | hypothetical protein | - |
| CCU04_RS28180 () | 47428..47634 | + | 207 | WP_000275847.1 | hypothetical protein | - |
| CCU04_RS27745 () | 47748..47945 | + | 198 | WP_045174704.1 | hypothetical protein | - |
| CCU04_RS27750 () | 48064..48881 | + | 818 | Protein_51 | DUF932 domain-containing protein | - |
| CCU04_RS27755 () | 49160..50497 | + | 1338 | WP_001368890.1 | IS4 family transposase ISCro3 | Transposase |
| CCU04_RS27760 () | 50618..51259 | - | 642 | WP_169072575.1 | hypothetical protein | VF |
| CCU04_RS27765 () | 51541..51924 | + | 384 | WP_001151541.1 | relaxosome protein TraM | - |
| CCU04_RS27785 () | 54135..56795 | + | 2661 | WP_000770130.1 | Metalloprotease StcE | VF |
| CCU04_RS27790 () | 56879..57754 | + | 876 | WP_001368871.1 | Type II secretion system protein C | VF |
| CCU04_RS27795 () | 57755..59725 | + | 1971 | WP_001368872.1 | Type II secretion system protein D | VF |
| CCU04_RS27800 () | 59722..61224 | + | 1503 | WP_001368867.1 | Type II secretion system protein E | VF |
| CCU04_RS27805 () | 61226..62449 | + | 1224 | WP_001173149.1 | Type II secretion system protein F | VF |
| CCU04_RS27810 () | 62480..62914 | + | 435 | WP_001231213.1 | Type II secretion system protein G | VF |
| CCU04_RS27815 () | 62911..63462 | + | 552 | WP_000082928.1 | type II secretion system minor pseudopilin GspH | - |
| CCU04_RS27820 () | 63477..63824 | + | 348 | WP_024173653.1 | Type II secretion system protein I | VF |
| CCU04_RS27825 () | 63821..64420 | + | 600 | WP_000082784.1 | Type II secretion system protein J | VF |
| CCU04_RS27830 () | 64417..65394 | + | 978 | WP_000842182.1 | Putative type II secretion system protein K | VF |
| CCU04_RS27835 () | 65433..66605 | + | 1173 | WP_001368870.1 | Type II secretion system protein L | VF |
| CCU04_RS27840 () | 66592..67107 | + | 516 | WP_000998852.1 | Type II secretion system protein M | VF |
| CCU04_RS27845 () | 67159..67992 | + | 834 | WP_000088802.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| CCU04_RS27850 () | 68086..68487 | + | 402 | WP_001222322.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| CCU04_RS27855 () | 68562..68777 | + | 216 | Protein_70 | IS3 family transposase IS1203 | Transposase |
| CCU04_RS27865 () | 69091..69435 | + | 345 | Protein_71 | hypothetical protein | - |
| CCU04_RS27875 () | 70679..70942 | + | 264 | Protein_73 | IS3 family transposase ISEc25 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|