MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP031908 Location: 4903935..4913286 Organism: Escherichia coli O103:H2 strain FWSEC0007 Replicon: chromosome
Accession: NZ_CP031908 Location: 4903935..4913286 Organism: Escherichia coli O103:H2 strain FWSEC0007 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCU04_RS25125 () | 4899564..4900049 | + | 486 | WP_000849570.1 | antirestriction protein | - |
| CCU04_RS25130 () | 4900065..4900541 | + | 477 | WP_001186727.1 | RadC family protein | - |
| CCU04_RS25135 () | 4900604..4900825 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| CCU04_RS25140 () | 4900988..4901356 | + | 369 | WP_001339471.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| CCU04_RS25145 () | 4901446..4901823 | + | 378 | WP_000854748.1 | TA system toxin CbtA family protein | - |
| CCU04_RS25150 () | 4901820..4902308 | + | 489 | WP_000761721.1 | hypothetical protein | - |
| CCU04_RS25155 () | 4902320..4902517 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| CCU04_RS25160 () | 4902614..4903186 | + | 573 | WP_001290246.1 | DUF4942 domain-containing protein | - |
| CCU04_RS25165 () | 4903935..4905473 | + | 1539 | WP_001187182.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| CCU04_RS25175 () | 4905839..4907173 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| CCU04_RS25180 () | 4907253..4909400 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| CCU04_RS25185 () | 4909459..4910916 | + | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| CCU04_RS25190 () | 4911153..4912670 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| CCU04_RS25195 () | 4912789..4912962 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| CCU04_RS25200 () | 4912990..4913286 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| CCU04_RS25205 () | 4913513..4913785 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| CCU04_RS25210 () | 4913797..4914027 | - | 231 | WP_000371700.1 | (4Fe-4S)-binding protein | - |
| CCU04_RS25215 () | 4914208..4915839 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| CCU04_RS25220 () | 4915836..4916555 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.007 |