MGE detailed information
MGE type: Conjugative plasmid MGE length: 88545 bp
Accession: NZ_CP031903 Location: 1..88545 Organism: Escherichia coli O104:H4 strain FWSEC0009 Replicon: plasmid unnamed18
Accession: NZ_CP031903 Location: 1..88545 Organism: Escherichia coli O104:H4 strain FWSEC0009 Replicon: plasmid unnamed18
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C8200_RS27755 () | 362..538 | - | 177 | WP_001054898.1 | hypothetical protein | - |
| C8200_RS26395 () | 721..930 | - | 210 | WP_001140543.1 | hemolysin expression modulator Hha | - |
| C8200_RS26400 () | 1028..1642 | - | 615 | WP_000578648.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| C8200_RS26405 () | 1718..3886 | - | 2169 | WP_000698360.1 | IncI1-type conjugal transfer membrane protein TraY | - |
| C8200_RS26410 () | 3983..4567 | - | 585 | WP_001037983.1 | IncI1-type conjugal transfer protein TraX | - |
| C8200_RS26415 () | 4596..5798 | - | 1203 | WP_001387490.1 | IncI1-type conjugal transfer protein TraW | - |
| C8200_RS26420 () | 5765..6379 | - | 615 | WP_000337395.1 | IncI1-type conjugal transfer protein TraV | - |
| C8200_RS26425 () | 6379..9423 | - | 3045 | WP_001024789.1 | IncI1-type conjugal transfer protein TraU | - |
| C8200_RS26430 () | 9513..10313 | - | 801 | WP_001164783.1 | IncI1-type conjugal transfer protein TraT | - |
| C8200_RS26435 () | 10297..10485 | - | 189 | WP_001277253.1 | putative conjugal transfer protein TraS | - |
| C8200_RS26440 () | 10549..10953 | - | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| C8200_RS26445 () | 11004..11531 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| C8200_RS26450 () | 11531..12235 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| C8200_RS26455 () | 12235..13524 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| C8200_RS26460 () | 13527..14510 | - | 984 | WP_001191879.1 | hypothetical protein | VF |
| C8200_RS26465 () | 14521..15213 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| C8200_RS26470 () | 15210..15557 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| C8200_RS26475 () | 15575..19339 | - | 3765 | WP_001141540.1 | DNA primase | - |
| C8200_RS26480 () | 19429..19980 | - | 552 | WP_000014586.1 | Phospholipase D | VF |
| C8200_RS26485 () | 19995..20285 | - | 291 | WP_001314267.1 | hypothetical protein | - |
| C8200_RS26490 () | 20282..21430 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| C8200_RS26495 () | 21427..22245 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| C8200_RS26500 () | 22242..22700 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| C8200_RS26505 () | 23095..23679 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| C8200_RS26510 () | 23739..24941 | - | 1203 | WP_000976357.1 | conjugal transfer protein TraF | - |
| C8200_RS26515 () | 25027..25851 | - | 825 | WP_001238932.1 | conjugal transfer protein TraE | - |
| C8200_RS26520 () | 26002..27156 | - | 1155 | WP_001139956.1 | integrase | - |
| C8200_RS26525 () | 27155..27241 | + | 87 | Protein_27 | shufflon protein D' | - |
| C8200_RS26535 () | 27290..27508 | + | 219 | WP_071527775.1 | shufflon protein D' | - |
| C8200_RS26560 () | 28677..28925 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| C8200_RS26565 () | 28922..30214 | - | 1293 | WP_001390622.1 | hypothetical protein | VF |
| C8200_RS26570 () | 30214..30870 | - | 657 | WP_001193549.1 | hypothetical protein | VF |
| C8200_RS26575 () | 30855..31415 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| C8200_RS26580 () | 31425..32039 | - | 615 | WP_000908227.1 | hypothetical protein | VF |
| C8200_RS26585 () | 32056..33141 | - | 1086 | WP_001208802.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| C8200_RS26590 () | 33154..34707 | - | 1554 | WP_000362206.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| C8200_RS26595 () | 34718..35170 | - | 453 | WP_001247337.1 | hypothetical protein | VF |
| C8200_RS26600 () | 35157..36452 | - | 1296 | WP_000752782.1 | type 4b pilus protein PilO2 | - |
| C8200_RS26605 () | 36445..38127 | - | 1683 | WP_000748144.1 | Outer membrane lipoprotein BfpB | VF |
| C8200_RS26610 () | 38141..38578 | - | 438 | WP_000539806.1 | hypothetical protein | VF |
| C8200_RS26615 () | 38578..39645 | - | 1068 | WP_001360287.1 | hypothetical protein | VF |
| C8200_RS26630 () | 40692..40946 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| C8200_RS26640 () | 41118..41801 | - | 684 | WP_000213862.1 | conjugal transfer protein TraC | - |
| C8200_RS26650 () | 42055..42588 | - | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| C8200_RS26660 () | 43030..43317 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| C8200_RS26665 () | 43235..43498 | - | 264 | WP_001387472.1 | ash family protein | - |
| C8200_RS26680 () | 44471..45502 | + | 1032 | WP_000907869.1 | replication initiation protein | - |
| C8200_RS26695 () | 46572..47081 | - | 510 | WP_000045395.1 | hypothetical protein | - |
| C8200_RS26700 () | 47137..47739 | - | 603 | WP_000517687.1 | hypothetical protein | - |
| C8200_RS26710 () | 48092..49438 | + | 1347 | WP_001132021.1 | hypothetical protein | - |
| C8200_RS26720 () | 49926..52721 | - | 2796 | Protein_50 | Tn3 family transposase TnpA_Tn3 | Transposase |
| C8200_RS26725 () | 52735..53067 | + | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| C8200_RS26730 () | 53114..53989 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| C8200_RS26735 () | 54245..55507 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| C8200_RS26740 () | 55713..55907 | - | 195 | Protein_54 | Tn3 family transposase TnpA_Tn3 | Transposase |
| C8200_RS26745 () | 56071..56628 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| C8200_RS26750 () | 56811..57671 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| C8200_RS27760 () | 57940..58242 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| C8200_RS26760 () | 58239..58865 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| C8200_RS26765 () | 59069..60340 | - | 1272 | WP_000457515.1 | Y-family DNA polymerase | - |
| C8200_RS26770 () | 60340..60777 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C8200_RS26775 () | 60774..61022 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| C8200_RS26790 () | 61441..62343 | + | 903 | WP_023383827.1 | DUF1281 domain-containing protein | - |
| C8200_RS26795 () | 62340..62651 | + | 312 | WP_001310011.1 | hypothetical protein | - |
| C8200_RS26800 () | 62728..63411 | + | 684 | WP_000086153.1 | DNA methylase | - |
| C8200_RS26805 () | 63412..63633 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| C8200_RS26810 () | 63647..64081 | + | 435 | WP_000274412.1 | DUF1380 family protein | - |
| C8200_RS27765 () | 64127..64903 | + | 777 | WP_001005022.1 | hypothetical protein | - |
| C8200_RS26825 () | 65440..65742 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| C8200_RS26830 () | 65789..66211 | + | 423 | WP_000271745.1 | DUF1380 family protein | - |
| C8200_RS26835 () | 66208..66399 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| C8200_RS27770 () | 66413..66784 | + | 372 | WP_001392076.1 | hypothetical protein | - |
| C8200_RS26840 () | 67169..67696 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| C8200_RS26845 () | 67754..67987 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| C8200_RS26850 () | 68046..70004 | + | 1959 | WP_001145488.1 | ParB/RepB/Spo0J family partition protein | - |
| C8200_RS26855 () | 70059..70493 | + | 435 | WP_001387500.1 | conjugation system SOS inhibitor PsiB | - |
| C8200_RS26860 () | 70490..71209 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| C8200_RS26865 () | 71206..71802 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| C8200_RS26875 () | 72264..72764 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| C8200_RS26890 () | 73493..73927 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| C8200_RS26895 () | 74021..74287 | + | 267 | WP_000804663.1 | hypothetical protein | - |
| C8200_RS26900 () | 74464..74853 | + | 390 | WP_000833766.1 | hypothetical protein | - |
| C8200_RS26905 () | 74850..75764 | + | 915 | WP_000038348.1 | Recombination-promoting nuclease RpnA | VF |
| C8200_RS26910 () | 75826..76032 | + | 207 | WP_000150314.1 | hypothetical protein | VF |
| C8200_RS26915 () | 76063..76314 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| C8200_RS26920 () | 76348..76545 | - | 198 | WP_001161107.1 | hypothetical protein | - |
| C8200_RS26930 () | 76894..77742 | + | 849 | WP_001077053.1 | DUF4942 domain-containing protein | - |
| C8200_RS26935 () | 77829..78164 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| C8200_RS26940 () | 78398..78730 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| C8200_RS26945 () | 78741..81440 | + | 2700 | WP_001387486.1 | Protein TraI | Relaxase |
| C8200_RS26950 () | 81477..83768 | - | 2292 | WP_001289278.1 | conjugal transfer protein TrbC | - |
| C8200_RS26955 () | 83761..84831 | - | 1071 | WP_000151588.1 | IncI1-type conjugal transfer protein TrbB | - |
| C8200_RS26960 () | 84850..86058 | - | 1209 | WP_000121263.1 | hypothetical protein | VF |
| C8200_RS26965 () | 86365..87456 | - | 1092 | WP_000426061.1 | hypothetical protein | - |
| - () | 87659..87721 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 87659..87721 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 87659..87721 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 87659..87721 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| C8200_RS26970 () | 87771..87923 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| C8200_RS26975 () | 87995..88246 | - | 252 | WP_001291964.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|