MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 156517 bp
Accession: NZ_CP031902 Location: 764207..920723 Organism: Escherichia coli O104:H4 strain FWSEC0009 Replicon: chromosome
Accession: NZ_CP031902 Location: 764207..920723 Organism: Escherichia coli O104:H4 strain FWSEC0009 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C8200_RS03835 () | 760193..761626 | + | 1434 | WP_000869178.1 | bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE | - |
| - () | 761706..761847 | + | 142 | NuclAT_6 | - | - |
| - () | 761706..761847 | + | 142 | NuclAT_6 | - | - |
| - () | 761706..761847 | + | 142 | NuclAT_6 | - | - |
| - () | 761706..761847 | + | 142 | NuclAT_6 | - | - |
| C8200_RS03840 () | 761746..761805 | - | 60 | WP_001387082.1 | type I toxin-antitoxin system Ibs family toxin | - |
| - () | 762082..762223 | + | 142 | NuclAT_1 | - | - |
| - () | 762082..762223 | + | 142 | NuclAT_1 | - | - |
| - () | 762082..762223 | + | 142 | NuclAT_1 | - | - |
| - () | 762082..762223 | + | 142 | NuclAT_1 | - | - |
| - () | 762082..762223 | + | 142 | NuclAT_7 | - | - |
| - () | 762082..762223 | + | 142 | NuclAT_7 | - | - |
| - () | 762082..762223 | + | 142 | NuclAT_7 | - | - |
| - () | 762082..762223 | + | 142 | NuclAT_7 | - | - |
| C8200_RS03845 () | 762122..762181 | - | 60 | WP_001387081.1 | type I toxin-antitoxin system Ibs family toxin | - |
| C8200_RS03850 () | 762420..764081 | - | 1662 | WP_000341046.1 | flotillin family protein | - |
| C8200_RS03855 () | 764108..764737 | - | 630 | WP_000599947.1 | DUF1449 family protein | - |
| C8200_RS03860 () | 765006..765206 | + | 201 | WP_000350095.1 | cell surface composition regulator GlgS | - |
| C8200_RS03865 () | 765249..766313 | - | 1065 | WP_001269793.1 | fimbrial protein | - |
| C8200_RS03870 () | 766315..767064 | - | 750 | WP_001387080.1 | hypothetical protein | VF |
| C8200_RS03875 () | 767080..769584 | - | 2505 | WP_000277116.1 | hypothetical protein | VF |
| C8200_RS03880 () | 769644..770195 | - | 552 | WP_001272149.1 | hypothetical protein | VF |
| C8200_RS03885 () | 770478..770768 | - | 291 | WP_001297598.1 | IS1182 family transposase ISBusp4 | Transposase |
| C8200_RS03890 () | 771142..771795 | + | 654 | WP_001076997.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| C8200_RS27515 () | 772056..772226 | + | 171 | WP_000469266.1 | hypothetical protein | - |
| C8200_RS03895 () | 772284..773057 | - | 774 | WP_001295627.1 | zinc transporter ZupT | - |
| C8200_RS03900 () | 773200..773988 | + | 789 | WP_001299419.1 | 4,5-DOPA dioxygenase extradiol | - |
| C8200_RS03905 () | 774026..775186 | - | 1161 | WP_000442859.1 | glutathionylspermidine synthase family protein | - |
| C8200_RS03910 () | 775192..775863 | - | 672 | WP_000831543.1 | DUF1190 family protein | - |
| C8200_RS03915 () | 776011..777492 | - | 1482 | WP_000735278.1 | outer membrane channel protein TolC | - |
| C8200_RS03920 () | 777697..778326 | + | 630 | WP_000917117.1 | ADP-ribose diphosphatase | - |
| C8200_RS03925 () | 778327..778749 | + | 423 | WP_000833393.1 | DUF1249 family protein | - |
| C8200_RS03930 () | 778774..779601 | + | 828 | WP_000444747.1 | 3',5'-cyclic-AMP phosphodiesterase | - |
| C8200_RS03935 () | 779601..780182 | + | 582 | WP_000105733.1 | esterase YqiA | - |
| C8200_RS03940 () | 780211..782103 | + | 1893 | WP_000195296.1 | DNA topoisomerase IV subunit B | - |
| C8200_RS03945 () | 782151..782465 | - | 315 | WP_000958598.1 | antibiotic biosynthesis monooxygenase | - |
| C8200_RS03950 () | 782496..783077 | - | 582 | WP_000065430.1 | NADPH:quinone oxidoreductase MdaB | - |
| C8200_RS03955 () | 783396..783728 | + | 333 | WP_000912120.1 | DUF2645 family protein | - |
| C8200_RS03960 () | 783774..785123 | - | 1350 | WP_000673354.1 | two-component system sensor histidine kinase QseC | - |
| C8200_RS03965 () | 785120..785779 | - | 660 | WP_001221502.1 | Regulator of RpoS | VF |
| C8200_RS03970 () | 785931..786323 | + | 393 | WP_000712658.1 | OB fold stress tolerance protein YgiW | - |
| C8200_RS03975 () | 786376..786858 | + | 483 | WP_000183494.1 | transcriptional regulator | - |
| C8200_RS03980 () | 787404..789662 | + | 2259 | WP_001281881.1 | DNA topoisomerase IV subunit A | - |
| C8200_RS03985 () | 789895..790632 | + | 738 | WP_000965703.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
| C8200_RS03990 () | 790707..792119 | + | 1413 | WP_000059395.1 | cell division protein FtsP | - |
| C8200_RS03995 () | 792230..794449 | + | 2220 | WP_000095187.1 | YgiQ family radical SAM protein | - |
| C8200_RS04000 () | 794492..794749 | - | 258 | WP_000848528.1 | lipoprotein YqhH | - |
| C8200_RS04005 () | 794800..795726 | - | 927 | WP_000691598.1 | YbjP/YqhG family protein | - |
| C8200_RS04010 () | 795926..796753 | - | 828 | WP_000013149.1 | 2,5-didehydrogluconate reductase DkgA | - |
| C8200_RS04015 () | 796858..798021 | - | 1164 | WP_001058807.1 | alcohol dehydrogenase | - |
| C8200_RS04020 () | 798215..799114 | + | 900 | WP_024174618.1 | DNA-binding transcriptional regulator YqhC | - |
| C8200_RS04025 () | 799154..799813 | - | 660 | WP_000268419.1 | DedA family protein | - |
| C8200_RS04030 () | 799953..801140 | - | 1188 | WP_001315867.1 | cystathionine beta-lyase | - |
| C8200_RS04035 () | 801392..802126 | + | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| C8200_RS04040 () | 802133..802558 | + | 426 | WP_001240712.1 | TonB system transport protein ExbD | - |
| C8200_RS04045 () | 802597..803481 | - | 885 | WP_000018758.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| C8200_RS04050 () | 803672..804166 | + | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| C8200_RS04055 () | 804206..805246 | - | 1041 | WP_000262151.1 | L-glyceraldehyde 3-phosphate reductase | - |
| C8200_RS04060 () | 805403..806290 | + | 888 | WP_001297303.1 | dienelactone hydrolase family protein | - |
| C8200_RS04065 () | 806409..806696 | + | 288 | WP_001059136.1 | DUF2623 domain-containing protein | - |
| C8200_RS04070 () | 806885..808003 | + | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| C8200_RS04075 () | 808006..808992 | + | 987 | WP_001081870.1 | hydrogenase 2 operon protein HybA | - |
| C8200_RS04080 () | 808982..810160 | + | 1179 | WP_000017703.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| C8200_RS04085 () | 810157..811860 | + | 1704 | WP_000083065.1 | hydrogenase 2 large subunit | - |
| C8200_RS04090 () | 811860..812354 | + | 495 | WP_001221953.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| C8200_RS04095 () | 812347..812835 | + | 489 | WP_000134014.1 | hydrogenase-2 assembly chaperone | - |
| C8200_RS04100 () | 812828..813169 | + | 342 | WP_000544953.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| C8200_RS04105 () | 813182..813430 | + | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| C8200_RS04110 () | 813552..814532 | - | 981 | WP_000399648.1 | IS110 family transposase IS621 | Transposase |
| C8200_RS04120 () | 814832..815698 | - | 867 | WP_001387074.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| C8200_RS04125 () | 815903..817762 | + | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| C8200_RS04130 () | 818054..819553 | + | 1500 | WP_000933258.1 | inorganic phosphate transporter PitB | - |
| C8200_RS04135 () | 819602..820294 | - | 693 | WP_001190780.1 | thymidylate kinase | - |
| C8200_RS04140 () | 820468..821181 | + | 714 | WP_001076097.1 | thymidylate kinase | - |
| C8200_RS04145 () | 821213..821971 | + | 759 | WP_000339532.1 | hypothetical protein | - |
| C8200_RS04150 () | 822017..823366 | + | 1350 | WP_000896880.1 | lipopolysaccharide biosynthesis protein | - |
| C8200_RS04155 () | 823366..824190 | + | 825 | WP_000984978.1 | hypothetical protein | - |
| C8200_RS04160 () | 824202..824762 | + | 561 | WP_001299422.1 | YtfJ family protein | - |
| C8200_RS04165 () | 824793..825863 | + | 1071 | WP_000779661.1 | LPS export ABC transporter permease LptF | - |
| C8200_RS04170 () | 825860..826939 | + | 1080 | WP_001387073.1 | LPS export ABC transporter permease LptG | - |
| C8200_RS04175 () | 826974..828146 | - | 1173 | WP_000524972.1 | 8-amino-7-oxononanoate synthase | VF |
| C8200_RS04180 () | 828146..828394 | - | 249 | WP_000248097.1 | acyl carrier protein | - |
| C8200_RS04185 () | 828426..829340 | - | 915 | WP_001077177.1 | NAD-dependent epimerase/dehydratase family protein | - |
| C8200_RS04190 () | 829337..831058 | - | 1722 | WP_001390306.1 | 2-succinylbenzoate--CoA ligase | VF |
| C8200_RS04195 () | 831429..832571 | + | 1143 | WP_000388786.1 | DNA-binding protein | - |
| C8200_RS04200 () | 832578..833342 | - | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| C8200_RS04205 () | 833593..835092 | + | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| C8200_RS04210 () | 835092..836144 | + | 1053 | WP_000943059.1 | glycolate oxidase subunit GlcE | - |
| C8200_RS04215 () | 836155..837378 | + | 1224 | WP_001194680.1 | glycolate oxidase subunit GlcF | - |
| C8200_RS04220 () | 837383..837787 | + | 405 | WP_000853256.1 | protein GlcG | - |
| C8200_RS04225 () | 837809..839980 | + | 2172 | WP_000084080.1 | malate synthase G | - |
| C8200_RS04230 () | 840336..842018 | + | 1683 | WP_000259303.1 | glycolate permease GlcA | - |
| C8200_RS04235 () | 842504..847069 | + | 4566 | WP_001034494.1 | hypothetical protein | VF |
| C8200_RS04240 () | 847209..848018 | + | 810 | WP_001365924.1 | hypothetical protein | VF |
| C8200_RS04245 () | 848084..848494 | + | 411 | WP_001324279.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| C8200_RS04250 () | 848512..849471 | + | 960 | WP_000135063.1 | hypothetical protein | VF |
| C8200_RS04255 () | 849501..851561 | + | 2061 | WP_000498829.1 | hypothetical protein | VF |
| C8200_RS04260 () | 851561..853054 | + | 1494 | WP_000249348.1 | hypothetical protein | VF |
| C8200_RS04265 () | 853054..854277 | + | 1224 | WP_001173453.1 | hypothetical protein | VF |
| C8200_RS04270 () | 854294..854749 | + | 456 | WP_001087296.1 | hypothetical protein | VF |
| C8200_RS04275 () | 854753..855316 | + | 564 | WP_001115140.1 | hypothetical protein | VF |
| C8200_RS04280 () | 855313..855684 | + | 372 | WP_000820125.1 | hypothetical protein | VF |
| C8200_RS04285 () | 855681..856280 | + | 600 | WP_001255040.1 | hypothetical protein | VF |
| C8200_RS04290 () | 856283..857260 | + | 978 | WP_000633238.1 | hypothetical protein | VF |
| C8200_RS04295 () | 857257..858435 | + | 1179 | WP_000094962.1 | hypothetical protein | VF |
| C8200_RS04300 () | 858437..858973 | + | 537 | WP_000942795.1 | hypothetical protein | VF |
| C8200_RS04305 () | 859254..860096 | - | 843 | WP_001280493.1 | DUF4942 domain-containing protein | - |
| C8200_RS04310 () | 860181..860378 | - | 198 | WP_085949090.1 | DUF957 domain-containing protein | - |
| C8200_RS04315 () | 860406..860603 | - | 198 | Protein_824 | hypothetical protein | - |
| C8200_RS04320 () | 860600..860977 | - | 378 | WP_001094429.1 | TA system toxin CbtA family protein | Toxin Detail |
| C8200_RS04325 () | 861024..861401 | - | 378 | WP_001285616.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| C8200_RS04330 () | 861481..861702 | - | 222 | WP_000692357.1 | DUF987 domain-containing protein | - |
| C8200_RS04335 () | 861789..862265 | - | 477 | WP_001388380.1 | RadC family protein | - |
| C8200_RS04340 () | 862281..862754 | - | 474 | WP_000855081.1 | antirestriction protein | - |
| C8200_RS04350 () | 863056..863874 | - | 819 | WP_001234603.1 | DUF945 domain-containing protein | - |
| C8200_RS04360 () | 863974..864207 | - | 234 | WP_001119729.1 | DUF905 family protein | - |
| C8200_RS04365 () | 864286..864741 | - | 456 | WP_000581502.1 | hypothetical protein | - |
| C8200_RS04370 () | 864817..867333 | - | 2517 | WP_001387066.1 | membrane protein | - |
| C8200_RS04375 () | 867454..870573 | - | 3120 | WP_000820379.1 | autotransporter adhesin Ag43 | - |
| C8200_RS04380 () | 870907..871779 | - | 873 | WP_001069724.1 | GTPase family protein | - |
| C8200_RS04385 () | 871889..872908 | - | 1020 | WP_001388379.1 | hypothetical protein | - |
| C8200_RS04395 () | 874087..874194 | - | 108 | Protein_837 | IS1 family transposase | - |
| C8200_RS04405 () | 874403..874975 | - | 573 | WP_001170560.1 | hypothetical protein | - |
| C8200_RS04410 () | 875061..875267 | - | 207 | WP_001095912.1 | AlpA family transcriptional regulator | - |
| C8200_RS04415 () | 875966..876178 | + | 213 | WP_000453331.1 | hemolysin expression modulator Hha | - |
| C8200_RS27520 () | 876418..876591 | - | 174 | WP_001387062.1 | hypothetical protein | - |
| C8200_RS04425 () | 876795..877364 | + | 570 | WP_000220727.1 | inovirus Gp2 family protein | - |
| C8200_RS27525 () | 877402..877560 | + | 159 | WP_000493525.1 | hypothetical protein | - |
| C8200_RS04430 () | 877532..877915 | + | 384 | WP_000271022.1 | hypothetical protein | - |
| C8200_RS04435 () | 877905..878324 | + | 420 | WP_001387059.1 | hypothetical protein | - |
| C8200_RS04440 () | 878330..878512 | + | 183 | WP_001216313.1 | hypothetical protein | - |
| C8200_RS04445 () | 878633..879256 | + | 624 | WP_001260266.1 | hypothetical protein | - |
| C8200_RS04450 () | 879352..879585 | + | 234 | WP_000124181.1 | hypothetical protein | - |
| C8200_RS04455 () | 879638..879829 | - | 192 | WP_001287796.1 | DUF4222 domain-containing protein | - |
| C8200_RS04460 () | 880336..880833 | + | 498 | WP_000098939.1 | hypothetical protein | VF |
| C8200_RS04465 () | 880855..882216 | + | 1362 | WP_000930193.1 | hypothetical protein | VF |
| C8200_RS04470 () | 882318..883562 | + | 1245 | WP_000897032.1 | GIY-YIG nuclease family protein | - |
| C8200_RS04475 () | 883798..885543 | + | 1746 | WP_001390303.1 | AAA family ATPase | - |
| C8200_RS04480 () | 885608..885913 | + | 306 | WP_001420595.1 | hypothetical protein | - |
| C8200_RS04485 () | 886028..886195 | + | 168 | Protein_855 | transcriptional regulator | - |
| C8200_RS04490 () | 886274..886543 | + | 270 | WP_000226517.1 | PerC family transcriptional regulator | - |
| C8200_RS04495 () | 886564..887208 | + | 645 | WP_001387055.1 | hypothetical protein | - |
| C8200_RS04500 () | 887274..887597 | + | 324 | WP_001387054.1 | hypothetical protein | - |
| C8200_RS04505 () | 887628..888207 | - | 580 | Protein_859 | transposase | - |
| C8200_RS04515 () | 888417..888803 | + | 387 | WP_014966195.1 | hypothetical protein | - |
| C8200_RS04520 () | 888781..888906 | + | 126 | WP_001420591.1 | hypothetical protein | - |
| C8200_RS04525 () | 888912..889928 | - | 1017 | Protein_862 | IS630 family transposase | - |
| C8200_RS04530 () | 890324..890800 | + | 477 | WP_000072549.1 | hypothetical protein | VF |
| C8200_RS04535 () | 890803..892281 | + | 1479 | WP_000215053.1 | hypothetical protein | VF |
| C8200_RS04540 () | 892291..892797 | + | 507 | WP_000233190.1 | type VI secretion system protein AaiC/Hcp2 | - |
| C8200_RS04545 () | 892807..893229 | + | 423 | WP_000555547.1 | hypothetical protein | - |
| C8200_RS04550 () | 893222..895024 | + | 1803 | WP_001390300.1 | type VI secretion system baseplate subunit TssF | - |
| C8200_RS04555 () | 895015..895947 | + | 933 | WP_001173975.1 | type VI secretion system baseplate subunit TssG | - |
| C8200_RS04560 () | 895960..897942 | + | 1983 | WP_000198270.1 | type VI secretion system tip protein VgrG | - |
| C8200_RS04565 () | 897953..898420 | + | 468 | WP_000005080.1 | hypothetical protein | - |
| C8200_RS04570 () | 898430..898729 | + | 300 | WP_001390299.1 | PAAR domain-containing protein | - |
| C8200_RS04575 () | 898733..899809 | + | 1077 | WP_001033155.1 | hypothetical protein | VF |
| C8200_RS04580 () | 899817..900368 | + | 552 | WP_000152746.1 | type VI secretion lipoprotein TssJ | - |
| C8200_RS04585 () | 900387..901799 | + | 1413 | WP_001154665.1 | type VI secretion system baseplate subunit TssK | - |
| C8200_RS04595 () | 902138..902728 | + | 591 | WP_001028113.1 | hypothetical protein | VF |
| C8200_RS04600 () | 902734..906138 | + | 3405 | WP_000914956.1 | type VI secretion protein | - |
| C8200_RS04605 () | 906142..908691 | + | 2550 | WP_000029846.1 | hypothetical protein | VF |
| C8200_RS04610 () | 908888..909625 | + | 738 | Protein_878 | IS3 family transposase IS1203 | Transposase |
| C8200_RS04620 () | 910298..911806 | + | 1509 | WP_001189118.1 | group II intron reverse transcriptase/maturase | - |
| C8200_RS04625 () | 911896..912369 | + | 474 | Protein_880 | IS3 family transposase IS629 | Transposase |
| C8200_RS27530 () | 914127..914693 | + | 567 | WP_000587872.1 | hypothetical protein | - |
| C8200_RS04650 () | 914758..915038 | + | 281 | Protein_882 | transposase | - |
| C8200_RS04655 () | 915172..916326 | + | 1155 | WP_000359994.1 | type VI secretion system ImpA family N-terminal domain-containing protein | - |
| C8200_RS04660 () | 917192..917362 | - | 171 | Protein_884 | ATP-dependent helicase | - |
| C8200_RS04665 () | 917392..917580 | - | 189 | Protein_885 | IS66 family transposase IS682 | Transposase |
| C8200_RS04670 () | 917641..918774 | + | 1134 | WP_000555380.1 | IS110 family transposase ISEc45 | Transposase |
| C8200_RS04675 () | 918814..919176 | + | 363 | WP_077577697.1 | IS3 family transposase | - |
| C8200_RS04680 () | 919180..919323 | + | 144 | Protein_888 | integrase core domain-containing protein | - |
| C8200_RS04685 () | 919509..921122 | - | 1614 | WP_000080172.1 | IS66-like element ISEc43 family transposase | - |
| C8200_RS04690 () | 921153..921503 | - | 351 | WP_000624688.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C8200_RS04695 () | 921500..921934 | - | 435 | WP_001309734.1 | IS66 family insertion sequence hypothetical protein | - |
| C8200_RS04700 () | 922022..922474 | + | 453 | Protein_892 | transposase | - |
| C8200_RS04705 () | 922513..922755 | + | 243 | Protein_893 | IS256 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|