MGE detailed information
MGE type: Conjugative plasmid MGE length: 160712 bp
Accession: NZ_CP031899 Location: 1..160712 Organism: Escherichia coli O113:H21 strain FWSEC0010 Replicon: plasmid unnamed1
Accession: NZ_CP031899 Location: 1..160712 Organism: Escherichia coli O113:H21 strain FWSEC0010 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C8201_RS24395 () | 1..1271 | + | 1271 | Protein_1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| C8201_RS24405 () | 1467..2093 | + | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| C8201_RS25640 () | 2090..2392 | + | 303 | WP_001245884.1 | hypothetical protein | - |
| C8201_RS24425 () | 2813..3064 | + | 252 | WP_031322317.1 | hypothetical protein | - |
| C8201_RS24430 () | 3064..3654 | + | 591 | WP_000194580.1 | hypothetical protein | - |
| C8201_RS24435 () | 3674..4021 | - | 348 | WP_000142449.1 | hypothetical protein | - |
| C8201_RS24440 () | 4140..4487 | + | 348 | WP_000762580.1 | hypothetical protein | - |
| C8201_RS24445 () | 4505..6385 | - | 1881 | WP_001283355.1 | colicin | - |
| C8201_RS24450 () | 6664..7329 | - | 666 | WP_000448923.1 | hypothetical protein | - |
| C8201_RS24455 () | 7352..7561 | - | 210 | Protein_10 | IS21 family transposase IS21 | Transposase |
| C8201_RS24465 () | 8058..10031 | + | 1974 | WP_024177478.1 | Hemin receptor | VF |
| C8201_RS24470 () | 10050..10841 | + | 792 | WP_000977390.1 | DUF4198 domain-containing protein | - |
| C8201_RS24480 () | 11346..11765 | + | 420 | WP_000422695.1 | IS66 family transposase ISEc23 | Transposase |
| C8201_RS24485 () | 11762..12112 | + | 351 | WP_000624657.1 | IS66 family transposase IS682 | Transposase |
| C8201_RS24490 () | 12143..13735 | + | 1593 | WP_000080208.1 | IS66 family transposase ISEc47 | Transposase |
| C8201_RS24495 () | 13765..13938 | + | 174 | Protein_16 | DUF4113 domain-containing protein | - |
| C8201_RS24500 () | 13940..14356 | - | 417 | WP_001278809.1 | plasmid partitioning/stability family protein | - |
| C8201_RS24505 () | 14349..15329 | - | 981 | WP_000688508.1 | plasmid segregation protein ParM | - |
| C8201_RS24510 () | 15744..16052 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| C8201_RS24515 () | 16139..16783 | - | 645 | WP_001144036.1 | ParA family protein | - |
| C8201_RS24520 () | 16963..17769 | - | 807 | WP_000016966.1 | site-specific integrase | - |
| C8201_RS24525 () | 17770..18075 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C8201_RS24530 () | 18077..18295 | - | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C8201_RS24535 () | 18891..19151 | + | 261 | WP_000343100.1 | hypothetical protein | - |
| C8201_RS24540 () | 19148..19738 | + | 591 | WP_000194569.1 | hypothetical protein | - |
| C8201_RS24545 () | 19756..20103 | - | 348 | WP_000142426.1 | hypothetical protein | - |
| C8201_RS24550 () | 20573..20908 | - | 336 | Protein_27 | colicin | - |
| C8201_RS24555 () | 21003..21734 | - | 732 | WP_000850413.1 | complement resistance protein TraT | - |
| C8201_RS25645 () | 22011..22121 | - | 111 | Protein_29 | IS481 family transposase | - |
| C8201_RS24565 () | 22125..22336 | - | 212 | Protein_30 | hypothetical protein | - |
| C8201_RS24575 () | 22905..23882 | + | 978 | WP_001369978.1 | RepB family plasmid replication initiator protein | - |
| C8201_RS24580 () | 24121..24403 | - | 283 | Protein_32 | ISL3 family transposase ISEc53 | Transposase |
| C8201_RS24585 () | 24560..24790 | - | 231 | WP_032279745.1 | hypothetical protein | - |
| C8201_RS24595 () | 24920..25414 | - | 495 | WP_000377257.1 | Transcriptional repressor MprA | VF |
| C8201_RS24600 () | 25535..26974 | - | 1440 | WP_001213534.1 | Hemolysin secretion protein D, chromosomal | VF |
| C8201_RS24605 () | 26978..29098 | - | 2121 | WP_072094473.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| C8201_RS24610 () | 29148..32144 | - | 2997 | WP_000217748.1 | Hemolysin, chromosomal | VF |
| C8201_RS24615 () | 32146..32661 | - | 516 | WP_001365635.1 | RTX-I toxin-activating lysine-acyltransferase ApxIC | VF |
| C8201_RS24625 () | 33089..33892 | - | 804 | WP_000899428.1 | Outer membrane protein A | VF |
| C8201_RS24630 () | 33917..38224 | - | 4308 | WP_024177480.1 | Autotransporter adhesin SadA | VF |
| C8201_RS24635 () | 38445..38729 | - | 285 | WP_000439678.1 | Major pilu subunit operon regulatory protein PapB | VF |
| C8201_RS24645 () | 39336..39883 | + | 548 | Protein_42 | transposase | - |
| C8201_RS24655 () | 40213..40647 | + | 435 | Protein_43 | IS110 family transposase ISEc21 | Transposase |
| C8201_RS24660 () | 40734..42259 | + | 1526 | Protein_44 | IS3 family transposase | - |
| C8201_RS24665 () | 42364..42993 | + | 630 | Protein_45 | transposase | - |
| C8201_RS24670 () | 43013..43361 | + | 349 | Protein_46 | transposase | - |
| C8201_RS24675 () | 43726..45282 | + | 1557 | WP_000554412.1 | L-lactate permease | - |
| C8201_RS24680 () | 45333..46052 | + | 720 | WP_001102092.1 | (Fe-S)-binding protein | - |
| C8201_RS24685 () | 46063..47478 | + | 1416 | WP_000054160.1 | iron-sulfur cluster-binding protein | - |
| C8201_RS24690 () | 47483..48181 | + | 699 | WP_000431492.1 | lactate utilization protein C | - |
| C8201_RS24695 () | 48222..48458 | - | 237 | WP_001369996.1 | hypothetical protein | - |
| C8201_RS24700 () | 48526..48990 | - | 465 | WP_077629759.1 | IS3 family transposase ISKpn8 | Transposase |
| C8201_RS24705 () | 49106..49417 | - | 312 | WP_000203485.1 | hypothetical protein | - |
| C8201_RS24710 () | 49445..49636 | - | 192 | WP_000264906.1 | hypothetical protein | - |
| C8201_RS24715 () | 49646..50011 | - | 366 | WP_000997727.1 | hypothetical protein | - |
| C8201_RS24725 () | 50145..50354 | + | 210 | WP_062896385.1 | hypothetical protein | - |
| C8201_RS24730 () | 50517..54419 | - | 3903 | WP_047091594.1 | Serine protease EspP | VF |
| C8201_RS24735 () | 54916..55302 | - | 387 | WP_000598953.1 | thermonuclease family protein | - |
| C8201_RS24740 () | 55461..56138 | + | 678 | WP_136718661.1 | DNA-binding protein | - |
| C8201_RS24750 () | 56628..56948 | - | 321 | WP_000220092.1 | hypothetical protein | - |
| C8201_RS24755 () | 57006..58168 | - | 1163 | Protein_61 | IS3 family transposase | - |
| C8201_RS24760 () | 58235..58324 | - | 90 | Protein_62 | transposase | - |
| C8201_RS24765 () | 58578..60071 | + | 1494 | WP_077173497.1 | Adhesin YadA | VF |
| C8201_RS24770 () | 60268..61385 | + | 1118 | Protein_64 | IS3 family transposase | - |
| C8201_RS24780 () | 61699..63786 | + | 2088 | WP_001223214.1 | bifunctional siderophore receptor/adhesin Iha | - |
| C8201_RS24785 () | 64047..64469 | - | 423 | WP_001212725.1 | Exc2 family lipoprotein | - |
| C8201_RS24790 () | 64804..64986 | - | 183 | Protein_67 | IS110 family transposase | - |
| C8201_RS24795 () | 65048..65236 | + | 189 | Protein_68 | IS66 family transposase IS682 | Transposase |
| C8201_RS24805 () | 65520..65945 | - | 426 | WP_001373081.1 | subtilase AB5 cytotoxin subunit B | - |
| C8201_RS24810 () | 65962..67005 | - | 1044 | WP_000912970.1 | subtilase AB5 cytotoxin subunit A | - |
| C8201_RS24815 () | 67059..67256 | - | 198 | Protein_71 | IS66 family transposase IS682 | Transposase |
| C8201_RS24820 () | 67294..68886 | - | 1593 | WP_000080208.1 | IS66 family transposase ISEc47 | Transposase |
| C8201_RS24825 () | 68917..69267 | - | 351 | WP_000624657.1 | IS66 family transposase IS682 | Transposase |
| C8201_RS24830 () | 69264..69683 | - | 420 | WP_000422688.1 | IS66 family transposase ISEc23 | Transposase |
| C8201_RS24835 () | 70111..70371 | - | 261 | WP_000038919.1 | hypothetical protein | - |
| C8201_RS24840 () | 70991..78457 | - | 7467 | Protein_76 | tRNA nuclease CdiA | VF |
| C8201_RS24845 () | 78910..79149 | - | 240 | WP_011310132.1 | MarR family transcriptional regulator | - |
| C8201_RS24850 () | 79162..79422 | - | 261 | WP_072094435.1 | hypothetical protein | - |
| C8201_RS24865 () | 80119..81150 | - | 1032 | WP_000907876.1 | hypothetical protein | - |
| C8201_RS24875 () | 81852..82493 | + | 642 | WP_000335846.1 | transcription termination factor NusG | - |
| C8201_RS24880 () | 82634..83299 | + | 666 | WP_000154144.1 | hypothetical protein | - |
| C8201_RS24890 () | 83566..84186 | + | 621 | WP_000176499.1 | DUF1449 family protein | - |
| C8201_RS24895 () | 84213..85907 | + | 1695 | WP_000482662.1 | flotillin family protein | - |
| C8201_RS24900 () | 85913..86230 | + | 318 | WP_001373093.1 | PilI type IV pilus biogenesis protein | - |
| C8201_RS24910 () | 86839..87909 | + | 1071 | WP_001170190.1 | hypothetical protein | VF |
| C8201_RS24915 () | 87914..88351 | + | 438 | WP_000539684.1 | type IV pilus biogenesis protein PilM | - |
| C8201_RS24920 () | 88382..90001 | + | 1620 | WP_001034996.1 | Outer membrane lipoprotein BfpB | VF |
| C8201_RS24925 () | 90022..91317 | + | 1296 | WP_000129891.1 | type 4b pilus protein PilO2 | - |
| C8201_RS24930 () | 91307..91759 | + | 453 | WP_001112923.1 | type IV pilus biogenesis protein PilP | - |
| C8201_RS24935 () | 91844..93352 | + | 1509 | WP_000886636.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| C8201_RS24940 () | 93354..94454 | + | 1101 | WP_000670139.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| C8201_RS24945 () | 94528..95064 | + | 537 | WP_001011156.1 | cleavage protein | - |
| C8201_RS24950 () | 95118..95591 | + | 474 | WP_000870986.1 | hypothetical protein | VF |
| C8201_RS24955 () | 95610..96245 | + | 636 | WP_000478595.1 | prepilin peptidase | - |
| C8201_RS24960 () | 96250..97614 | + | 1365 | WP_001168071.1 | hypothetical protein | VF |
| C8201_RS24975 () | 98072..98362 | + | 291 | WP_000681897.1 | hypothetical protein | - |
| C8201_RS24980 () | 98454..98774 | - | 321 | WP_000695056.1 | hypothetical protein | - |
| C8201_RS24985 () | 99034..99855 | + | 822 | WP_000804094.1 | hypothetical protein | - |
| C8201_RS24990 () | 99945..101146 | + | 1202 | Protein_99 | conjugal transfer protein TraF | - |
| C8201_RS24995 () | 101505..101957 | + | 453 | WP_001081198.1 | DotD/TraH family lipoprotein | - |
| C8201_RS25000 () | 101954..102790 | + | 837 | WP_000848138.1 | hypothetical protein | VF |
| C8201_RS25005 () | 102774..103922 | + | 1149 | WP_000625247.1 | putative protein YggR | VF |
| C8201_RS25010 () | 103919..104209 | + | 291 | WP_000817799.1 | hypothetical protein | - |
| C8201_RS25015 () | 104273..108289 | + | 4017 | WP_000842442.1 | hypothetical protein | - |
| C8201_RS25020 () | 108306..108656 | + | 351 | WP_001056369.1 | hypothetical protein | - |
| C8201_RS25025 () | 108668..109363 | + | 696 | WP_001287263.1 | DotI/IcmL family type IV secretion protein | - |
| C8201_RS25030 () | 109374..110348 | + | 975 | WP_001165562.1 | hypothetical protein | VF |
| C8201_RS25035 () | 110352..111683 | + | 1332 | WP_001272010.1 | conjugal transfer protein TraO | - |
| C8201_RS25040 () | 111680..112393 | + | 714 | WP_000787005.1 | conjugal transfer protein TraP | - |
| C8201_RS25045 () | 112393..112920 | + | 528 | WP_011310083.1 | conjugal transfer protein TraQ | - |
| C8201_RS25050 () | 112967..113365 | + | 399 | WP_000086066.1 | hypothetical protein | - |
| C8201_RS25055 () | 113422..113673 | + | 252 | WP_001277575.1 | hypothetical protein | - |
| C8201_RS25060 () | 113588..114406 | + | 819 | WP_072094468.1 | conjugal transfer protein TraT | - |
| C8201_RS25065 () | 114461..114820 | + | 360 | WP_000380399.1 | hypothetical protein | - |
| C8201_RS25070 () | 114820..115200 | + | 381 | WP_000690886.1 | hypothetical protein | - |
| C8201_RS25075 () | 115375..118419 | + | 3045 | WP_001024761.1 | hypothetical protein | - |
| C8201_RS25080 () | 118419..119036 | + | 618 | WP_000286857.1 | hypothetical protein | - |
| C8201_RS25085 () | 118997..120202 | + | 1206 | WP_001189539.1 | conjugal transfer protein TraW | - |
| C8201_RS25090 () | 120199..120768 | + | 570 | WP_000650755.1 | conjugal transfer protein TraX | - |
| C8201_RS25095 () | 120841..123006 | + | 2166 | WP_000691805.1 | DotA/TraY family protein | - |
| C8201_RS25100 () | 123077..123727 | + | 651 | WP_001098359.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| C8201_RS25105 () | 124001..125587 | + | 1587 | WP_000004566.1 | TnsA endonuclease N-terminal domain-containing protein | - |
| C8201_RS25110 () | 125725..125877 | - | 153 | WP_001367784.1 | Hok/Gef family protein | - |
| C8201_RS25115 () | 126211..126453 | + | 243 | WP_001398505.1 | hypothetical protein | - |
| C8201_RS25120 () | 126546..128081 | - | 1536 | WP_001373098.1 | phosphoethanolamine transferase | - |
| C8201_RS25125 () | 128282..128737 | - | 456 | WP_001205143.1 | DUF2569 family protein | - |
| C8201_RS25130 () | 128825..129448 | - | 624 | WP_001158018.1 | hypothetical protein | - |
| C8201_RS25135 () | 129607..130020 | + | 414 | WP_000598952.1 | thermonuclease family protein | - |
| C8201_RS25140 () | 130467..134546 | + | 4080 | WP_001034114.1 | Serine protease SepA autotransporter | VF |
| C8201_RS25145 () | 134709..134918 | - | 210 | WP_062896385.1 | hypothetical protein | - |
| C8201_RS25155 () | 135052..135417 | + | 366 | WP_000997727.1 | hypothetical protein | - |
| C8201_RS25160 () | 135427..135618 | + | 192 | WP_000264906.1 | hypothetical protein | - |
| C8201_RS25165 () | 135646..135957 | + | 312 | WP_000203485.1 | hypothetical protein | - |
| C8201_RS25180 () | 136740..138011 | + | 1272 | WP_000121915.1 | IncI1-type conjugal transfer protein TrbA | - |
| C8201_RS25185 () | 138008..139126 | + | 1119 | WP_000155605.1 | DsbC family protein | - |
| C8201_RS25190 () | 139107..141410 | + | 2304 | WP_000077647.1 | TraM recognition domain-containing protein | - |
| C8201_RS25195 () | 141536..141838 | + | 303 | WP_000334995.1 | hypothetical protein | - |
| C8201_RS25200 () | 141936..142367 | - | 432 | WP_001335086.1 | hypothetical protein | - |
| C8201_RS25205 () | 142435..145146 | - | 2712 | WP_000991390.1 | Protein TraI | Relaxase |
| C8201_RS25210 () | 145158..145490 | - | 333 | WP_001291058.1 | hypothetical protein | - |
| C8201_RS25215 () | 145722..146057 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| C8201_RS25220 () | 146142..146990 | - | 849 | WP_001077013.1 | DUF4942 domain-containing protein | - |
| C8201_RS25235 () | 147569..147820 | + | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| C8201_RS25240 () | 147851..148084 | - | 234 | WP_001370006.1 | hypothetical protein | - |
| C8201_RS25245 () | 148084..149010 | - | 927 | WP_000038346.1 | Recombination-promoting nuclease RpnA | VF |
| C8201_RS25250 () | 149075..149341 | - | 267 | WP_001247860.1 | hypothetical protein | - |
| C8201_RS25255 () | 149434..149868 | - | 435 | WP_000218848.1 | hypothetical protein | - |
| C8201_RS25270 () | 150601..151101 | - | 501 | WP_000117617.1 | antirestriction protein ArdA | - |
| C8201_RS25280 () | 151566..152162 | - | 597 | WP_000978008.1 | hypothetical protein | - |
| C8201_RS25285 () | 152159..152878 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| C8201_RS25290 () | 152875..153309 | - | 435 | WP_000845900.1 | conjugation system SOS inhibitor PsiB | - |
| C8201_RS25295 () | 153364..155322 | - | 1959 | WP_000117306.1 | ParB/RepB/Spo0J family partition protein | - |
| C8201_RS25300 () | 155382..155615 | - | 234 | WP_000006027.1 | DUF905 domain-containing protein | - |
| C8201_RS25305 () | 155673..156206 | - | 534 | WP_001276132.1 | single-stranded DNA-binding protein | - |
| C8201_RS25310 () | 156249..156926 | - | 678 | Protein_155 | hypothetical protein | - |
| C8201_RS25315 () | 156971..157405 | - | 435 | WP_000274419.1 | DUF1380 family protein | - |
| C8201_RS25320 () | 157419..157640 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| C8201_RS25325 () | 157641..158324 | - | 684 | WP_000086114.1 | DNA methylase | - |
| C8201_RS25330 () | 158401..158713 | - | 313 | Protein_159 | hypothetical protein | - |
| C8201_RS25335 () | 158710..159612 | - | 903 | WP_077629773.1 | DUF1281 domain-containing protein | - |
| C8201_RS25345 () | 160031..160279 | + | 249 | WP_000618108.1 | DinI-like family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|