MGE detailed information
MGE type: Prophage MGE length: 55338 bp
Accession: NZ_CP031886 Location: 1973861..2029198 Organism: Staphylococcus aureus strain CFSAN082783 Replicon: chromosome
Accession: NZ_CP031886 Location: 1973861..2029198 Organism: Staphylococcus aureus strain CFSAN082783 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D1E88_RS09850 () | 1969376..1970056 | - | 681 | WP_000645721.1 | phenol-soluble modulin export ABC transporter permease subunit PmtB | - |
| D1E88_RS09855 () | 1970057..1970953 | - | 897 | WP_000991300.1 | phenol-soluble modulin export ABC transporter ATP-binding protein PmtA | - |
| D1E88_RS09860 () | 1970950..1971330 | - | 381 | WP_000691584.1 | GntR family transcriptional regulator | - |
| D1E88_RS09865 () | 1971588..1971764 | - | 177 | WP_000681966.1 | hypothetical protein | - |
| D1E88_RS09870 () | 1972006..1972104 | - | 99 | WP_000990056.1 | hypothetical protein | - |
| D1E88_RS09875 () | 1972304..1973590 | + | 1287 | WP_001068518.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| D1E88_RS09880 () | 1973861..1975930 | - | 2070 | WP_000669710.1 | hypothetical protein | VF |
| D1E88_RS09885 () | 1976319..1976566 | + | 248 | Protein_1873 | hypothetical protein | VF |
| D1E88_RS09890 () | 1976888..1977067 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| D1E88_RS09900 () | 1977378..1977638 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| D1E88_RS09905 () | 1977691..1978041 | - | 351 | WP_000702263.1 | hypothetical protein | VF |
| D1E88_RS09910 () | 1978725..1979174 | + | 450 | WP_000727649.1 | hypothetical protein | VF |
| D1E88_RS09915 () | 1979269..1979604 | - | 336 | Protein_1878 | SH3 domain-containing protein | - |
| D1E88_RS09925 () | 1980254..1980745 | - | 492 | WP_000919350.1 | hypothetical protein | VF |
| D1E88_RS09930 () | 1980936..1981691 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| D1E88_RS09935 () | 1981703..1981957 | - | 255 | WP_000611512.1 | phage holin | - |
| D1E88_RS09940 () | 1982009..1982116 | + | 108 | WP_001791821.1 | hypothetical protein | - |
| - () | 1982038..1982177 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1982038..1982177 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1982038..1982177 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1982038..1982177 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| D1E88_RS09945 () | 1982169..1982345 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| D1E88_RS09950 () | 1982495..1982791 | - | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| D1E88_RS09955 () | 1982849..1983136 | - | 288 | WP_001040261.1 | hypothetical protein | - |
| D1E88_RS09960 () | 1983183..1983335 | - | 153 | WP_001153681.1 | hypothetical protein | - |
| D1E88_RS09965 () | 1983325..1987110 | - | 3786 | WP_000582165.1 | hypothetical protein | - |
| D1E88_RS09970 () | 1987126..1988610 | - | 1485 | WP_000567408.1 | phage tail family protein | - |
| D1E88_RS09975 () | 1988607..1993136 | - | 4530 | WP_001796452.1 | phage tail tape measure protein | - |
| D1E88_RS14275 () | 1993193..1993354 | - | 162 | WP_001789580.1 | hypothetical protein | - |
| D1E88_RS09980 () | 1993381..1993731 | - | 351 | WP_001096355.1 | hypothetical protein | - |
| D1E88_RS09985 () | 1993781..1994005 | - | 225 | WP_071621395.1 | Ig-like domain-containing protein | - |
| D1E88_RS09990 () | 1994047..1994691 | - | 645 | WP_000268733.1 | phage tail protein | - |
| D1E88_RS09995 () | 1994692..1995099 | - | 408 | WP_000565498.1 | hypothetical protein | - |
| D1E88_RS10000 () | 1995096..1995500 | - | 405 | WP_000114227.1 | HK97 gp10 family phage protein | - |
| D1E88_RS10005 () | 1995497..1995859 | - | 363 | WP_094969815.1 | head-tail adaptor protein | - |
| D1E88_RS10010 () | 1995843..1996127 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| D1E88_RS10015 () | 1996140..1996400 | - | 261 | WP_000238237.1 | hypothetical protein | - |
| D1E88_RS10020 () | 1996420..1997565 | - | 1146 | WP_000154559.1 | phage major capsid protein | - |
| D1E88_RS10025 () | 1997589..1998326 | - | 738 | WP_000642728.1 | Clp protease ClpP | - |
| D1E88_RS10030 () | 1998310..1999497 | - | 1188 | WP_000025274.1 | phage portal protein | - |
| D1E88_RS10035 () | 1999513..2001174 | - | 1662 | WP_000625088.1 | terminase large subunit | - |
| D1E88_RS10040 () | 2001171..2001515 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| D1E88_RS10045 () | 2001646..2001945 | - | 300 | WP_000988336.1 | HNH endonuclease | - |
| D1E88_RS10050 () | 2002177..2002593 | - | 417 | WP_000590122.1 | hypothetical protein | - |
| D1E88_RS10055 () | 2002621..2002821 | - | 201 | WP_001622114.1 | DUF1514 family protein | - |
| D1E88_RS10060 () | 2002821..2002970 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| D1E88_RS10065 () | 2002967..2003353 | - | 387 | WP_000592207.1 | hypothetical protein | - |
| D1E88_RS10070 () | 2003350..2003556 | - | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| D1E88_RS10075 () | 2003553..2003798 | - | 246 | WP_001282074.1 | hypothetical protein | - |
| D1E88_RS10080 () | 2003835..2003960 | - | 126 | Protein_1911 | dUTPase | - |
| D1E88_RS10090 () | 2004035..2005164 | + | 1130 | WP_149558570.1 | IS3 family transposase ISClsp1 | Transposase |
| D1E88_RS10095 () | 2005181..2005597 | - | 417 | Protein_1913 | dUTP diphosphatase | - |
| D1E88_RS14280 () | 2005590..2005760 | - | 171 | WP_000714403.1 | hypothetical protein | - |
| D1E88_RS10100 () | 2005747..2006001 | - | 255 | WP_001065097.1 | DUF1024 family protein | - |
| D1E88_RS10105 () | 2006016..2006258 | - | 243 | WP_000131370.1 | hypothetical protein | - |
| D1E88_RS10110 () | 2006262..2006630 | - | 369 | WP_000101288.1 | hypothetical protein | - |
| D1E88_RS10115 () | 2006643..2007047 | - | 405 | WP_000401960.1 | RusA family crossover junction endodeoxyribonuclease | - |
| D1E88_RS10120 () | 2007056..2007274 | - | 219 | WP_000338530.1 | hypothetical protein | - |
| D1E88_RS10125 () | 2007281..2008175 | - | 895 | Protein_1920 | DnaD domain-containing protein | - |
| D1E88_RS10130 () | 2008205..2008675 | - | 471 | WP_000610648.1 | single-stranded DNA-binding protein | - |
| D1E88_RS10135 () | 2008676..2009293 | - | 618 | WP_073394849.1 | MBL fold metallo-hydrolase | - |
| D1E88_RS10140 () | 2009374..2010294 | - | 921 | WP_000138475.1 | recombinase RecT | - |
| D1E88_RS10145 () | 2010296..2012239 | - | 1944 | WP_000700555.1 | AAA family ATPase | - |
| D1E88_RS10150 () | 2012248..2012511 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| D1E88_RS10155 () | 2012520..2012780 | - | 261 | WP_000291510.1 | DUF1108 family protein | - |
| D1E88_RS10160 () | 2012785..2013087 | - | 303 | WP_000165371.1 | DUF2482 family protein | - |
| D1E88_RS10165 () | 2013182..2013343 | - | 162 | WP_000048129.1 | DUF1270 family protein | - |
| D1E88_RS10170 () | 2013340..2013663 | - | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| D1E88_RS10175 () | 2013718..2014098 | + | 381 | WP_000762519.1 | DUF2513 domain-containing protein | - |
| D1E88_RS10180 () | 2014085..2014282 | - | 198 | WP_001148862.1 | hypothetical protein | - |
| D1E88_RS10185 () | 2014298..2015050 | - | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
| D1E88_RS10190 () | 2015101..2015430 | + | 330 | WP_000128907.1 | hypothetical protein | - |
| D1E88_RS10195 () | 2015419..2015634 | - | 216 | WP_001025404.1 | DUF2829 domain-containing protein | - |
| D1E88_RS10200 () | 2015631..2015912 | - | 282 | WP_000854074.1 | helix-turn-helix domain-containing protein | - |
| D1E88_RS10205 () | 2015909..2016082 | - | 174 | WP_001801500.1 | hypothetical protein | - |
| D1E88_RS10210 () | 2016045..2016758 | + | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| D1E88_RS10215 () | 2016774..2017706 | + | 933 | WP_000759682.1 | ATP-dependent helicase | - |
| D1E88_RS10220 () | 2017712..2018053 | + | 342 | WP_000591749.1 | hypothetical protein | - |
| D1E88_RS10225 () | 2018257..2018439 | + | 183 | WP_000705248.1 | hypothetical protein | - |
| D1E88_RS10230 () | 2018539..2019003 | + | 465 | WP_000825947.1 | hypothetical protein | - |
| D1E88_RS10235 () | 2019062..2020099 | + | 1038 | WP_000857191.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| D1E88_RS10240 () | 2020150..2020980 | + | 831 | Protein_1943 | hypothetical protein | VF |
| D1E88_RS10245 () | 2021237..2022256 | - | 1020 | WP_000595616.1 | hypothetical protein | VF |
| D1E88_RS10250 () | 2022278..2023333 | - | 1056 | WP_000791399.1 | hypothetical protein | VF |
| D1E88_RS10255 () | 2023764..2024987 | + | 1224 | WP_149558579.1 | ArgE/DapE family deacylase | - |
| D1E88_RS10260 () | 2025383..2026690 | + | 1308 | WP_001045070.1 | TrkH family potassium uptake protein | - |
| D1E88_RS10265 () | 2027222..2028838 | - | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| D1E88_RS10270 () | 2028914..2029198 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| D1E88_RS10275 () | 2029373..2030116 | + | 744 | WP_000197627.1 | CPBP family intramembrane metalloprotease | - |
| D1E88_RS10280 () | 2030141..2031346 | - | 1206 | WP_000120327.1 | hypothetical protein | - |
| D1E88_RS10285 () | 2031543..2032169 | + | 627 | WP_000522375.1 | nitroreductase family protein | - |
| D1E88_RS10290 () | 2032530..2033315 | + | 786 | WP_000867944.1 | carbon-nitrogen family hydrolase | - |
| D1E88_RS10295 () | 2033915..2034049 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|