MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 89643 bp
Accession: NZ_CP031654 Location: 1..89643 Organism: Escherichia coli strain UK_Dog_Liverpool Replicon: plasmid pCARB35_01
Accession: NZ_CP031654 Location: 1..89643 Organism: Escherichia coli strain UK_Dog_Liverpool Replicon: plasmid pCARB35_01
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DL545_RS25225 () | 1..861 | + | 861 | WP_001076427.1 | replication protein RepA | - |
| DL545_RS25235 () | 1419..2615 | + | 1197 | WP_001285362.1 | AAA family ATPase | - |
| DL545_RS25240 () | 2632..3633 | + | 1002 | WP_075851199.1 | ParB/RepB/Spo0J family partition protein | - |
| DL545_RS25245 () | 3859..5565 | + | 1707 | WP_059338140.1 | hypothetical protein | - |
| DL545_RS25250 () | 5626..7215 | + | 1590 | WP_029487601.1 | hypothetical protein | - |
| DL545_RS25255 () | 7225..8040 | + | 816 | WP_000041757.1 | hypothetical protein | - |
| DL545_RS25260 () | 8076..8657 | + | 582 | WP_000035301.1 | hypothetical protein | - |
| DL545_RS25265 () | 8669..9178 | + | 510 | WP_000509939.1 | hypothetical protein | - |
| DL545_RS25280 () | 10189..10893 | - | 705 | WP_000934731.1 | DUF3800 domain-containing protein | - |
| DL545_RS25285 () | 11062..11907 | - | 846 | WP_053287802.1 | hypothetical protein | - |
| DL545_RS25290 () | 11937..12737 | - | 801 | WP_075851197.1 | phage antirepressor KilAC domain-containing protein | - |
| DL545_RS25295 () | 12901..13935 | - | 1035 | WP_075851195.1 | phage antirepressor KilAC domain-containing protein | - |
| DL545_RS25300 () | 13932..14153 | - | 222 | WP_000245712.1 | host cell division inhibitor Icd-like protein | - |
| DL545_RS25310 () | 14773..15285 | + | 513 | WP_000039791.1 | hypothetical protein | - |
| DL545_RS25315 () | 15289..15828 | + | 540 | WP_001033469.1 | DUF5384 family protein | - |
| DL545_RS25320 () | 15909..16475 | + | 567 | WP_000188920.1 | hypothetical protein | - |
| DL545_RS25325 () | 16486..17097 | + | 612 | WP_000523980.1 | hypothetical protein | - |
| DL545_RS25330 () | 17112..17993 | + | 882 | WP_000926345.1 | hypothetical protein | - |
| DL545_RS25335 () | 18075..21815 | + | 3741 | WP_089438725.1 | transglycosylase SLT domain-containing protein | - |
| DL545_RS25340 () | 21815..22171 | + | 357 | WP_000002800.1 | hypothetical protein | - |
| DL545_RS25345 () | 22168..23601 | + | 1434 | WP_029487598.1 | bleomycin hydrolase | - |
| DL545_RS25350 () | 23601..24437 | + | 837 | WP_001561131.1 | hypothetical protein | - |
| DL545_RS25355 () | 24516..24950 | + | 435 | WP_001286322.1 | hypothetical protein | - |
| DL545_RS25360 () | 24962..29662 | + | 4701 | WP_116995190.1 | tail fiber protein | - |
| DL545_RS25365 () | 29662..30072 | + | 411 | WP_075851178.1 | tail fiber assembly protein | - |
| DL545_RS27065 () | 30208..30363 | - | 156 | Protein_25 | recombinase family protein | - |
| DL545_RS25370 () | 30491..30772 | + | 282 | WP_029487766.1 | hypothetical protein | - |
| DL545_RS25375 () | 30840..31169 | + | 330 | WP_029487765.1 | holin | - |
| DL545_RS25380 () | 31166..31609 | + | 444 | WP_075851376.1 | lysis protein | - |
| DL545_RS25385 () | 31596..32198 | + | 603 | WP_000164724.1 | hypothetical protein | - |
| DL545_RS25390 () | 32200..34119 | + | 1920 | WP_075851374.1 | hypothetical protein | - |
| DL545_RS25395 () | 34116..34481 | + | 366 | WP_045904054.1 | hypothetical protein | - |
| DL545_RS25400 () | 34494..37481 | + | 2988 | WP_075851372.1 | hypothetical protein | - |
| DL545_RS25405 () | 37471..37788 | + | 318 | WP_001376906.1 | hypothetical protein | - |
| DL545_RS25410 () | 37818..38612 | - | 795 | WP_075851370.1 | hypothetical protein | - |
| DL545_RS25415 () | 38815..39303 | - | 489 | WP_001615669.1 | single-stranded DNA-binding protein | - |
| DL545_RS25420 () | 39472..40029 | + | 558 | WP_001345478.1 | lysozyme | - |
| DL545_RS25430 () | 40321..41340 | - | 1020 | WP_046659817.1 | head processing protein | - |
| DL545_RS25435 () | 41333..43042 | - | 1710 | WP_075851368.1 | phage portal protein | - |
| DL545_RS25440 () | 43119..49886 | + | 6768 | WP_075851366.1 | N-6 DNA methylase | - |
| DL545_RS25445 () | 49920..50360 | + | 441 | WP_000224043.1 | hypothetical protein | - |
| DL545_RS25450 () | 50357..50605 | + | 249 | WP_000747846.1 | hypothetical protein | - |
| DL545_RS25455 () | 50664..51173 | - | 510 | WP_024245513.1 | hypothetical protein | - |
| DL545_RS25460 () | 51173..52213 | - | 1041 | WP_077902034.1 | hypothetical protein | - |
| DL545_RS25465 () | 52304..52945 | - | 642 | WP_075851364.1 | maturation control protein | - |
| DL545_RS25470 () | 53135..53695 | - | 561 | WP_023155281.1 | Ref family protein | - |
| DL545_RS25475 () | 53942..54253 | - | 312 | WP_024245510.1 | hypothetical protein | - |
| DL545_RS25480 () | 54304..55335 | - | 1032 | WP_046660036.1 | tyrosine-type recombinase/integrase | - |
| DL545_RS25485 () | 55343..55564 | - | 222 | WP_000542336.1 | hypothetical protein | - |
| DL545_RS25500 () | 56160..56369 | + | 210 | WP_000874154.1 | hypothetical protein | - |
| DL545_RS25505 () | 56480..57331 | + | 852 | WP_000611657.1 | hypothetical protein | - |
| DL545_RS25510 () | 57357..58841 | - | 1485 | WP_000124150.1 | terminase | - |
| DL545_RS25515 () | 58841..60034 | - | 1194 | WP_000219625.1 | hypothetical protein | - |
| DL545_RS25520 () | 60120..60572 | - | 453 | WP_001326849.1 | late promoter-activating protein | - |
| DL545_RS25525 () | 60661..61704 | - | 1044 | WP_023356283.1 | DUF968 domain-containing protein | - |
| DL545_RS25530 () | 61732..61911 | - | 180 | WP_001339207.1 | hypothetical protein | - |
| DL545_RS25535 () | 61916..62296 | - | 381 | WP_001216045.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| DL545_RS25540 () | 62296..62517 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DL545_RS25545 () | 62590..62979 | - | 390 | WP_000506730.1 | DNA repair protein | - |
| DL545_RS25550 () | 63154..63369 | + | 216 | Protein_59 | DNA-binding protein | - |
| DL545_RS25555 () | 63371..63745 | + | 375 | Protein_60 | IS3 family transposase ISSfl10 | Transposase |
| DL545_RS25560 () | 64316..66172 | - | 1857 | WP_077902027.1 | O-acetyltransferase OatA | VF |
| DL545_RS25565 () | 66398..67144 | + | 747 | Protein_62 | IS1 family transposase | - |
| DL545_RS27265 () | 67243..67422 | - | 180 | Protein_63 | hypothetical protein | - |
| DL545_RS25580 () | 67495..68757 | - | 1263 | WP_075851234.1 | hypothetical protein | - |
| DL545_RS25590 () | 69059..69760 | - | 702 | WP_075851232.1 | hypothetical protein | - |
| DL545_RS25595 () | 69757..70434 | - | 678 | WP_075851219.1 | metallophosphoesterase | - |
| DL545_RS25600 () | 70431..71057 | - | 627 | WP_000484108.1 | norphogenetic protein | - |
| DL545_RS25610 () | 71559..71714 | - | 156 | WP_000096174.1 | hypothetical protein | - |
| DL545_RS25615 () | 71781..72359 | - | 579 | WP_075851217.1 | VRR-NUC domain-containing protein | - |
| DL545_RS25620 () | 72362..72607 | - | 246 | WP_000840930.1 | hypothetical protein | - |
| DL545_RS25625 () | 72754..73131 | + | 378 | WP_000235786.1 | hypothetical protein | - |
| DL545_RS25630 () | 73141..74358 | + | 1218 | WP_075851215.1 | phage tail protein | - |
| DL545_RS25635 () | 74362..75090 | + | 729 | WP_000896806.1 | hypothetical protein | - |
| DL545_RS25640 () | 75077..75862 | + | 786 | WP_075851213.1 | baseplate | - |
| DL545_RS25645 () | 75864..76880 | + | 1017 | WP_000212018.1 | hypothetical protein | - |
| DL545_RS25650 () | 76873..77505 | + | 633 | WP_073884958.1 | baseplate protein | - |
| DL545_RS25655 () | 77552..78526 | - | 975 | WP_075851211.1 | hypothetical protein | - |
| DL545_RS25660 () | 78523..78825 | - | 303 | WP_001189128.1 | hypothetical protein | - |
| DL545_RS25665 () | 78825..80189 | - | 1365 | WP_001276605.1 | replicative DNA helicase | - |
| DL545_RS27270 () | 80263..80406 | - | 144 | WP_001702255.1 | hypothetical protein | - |
| DL545_RS25680 () | 80662..80826 | - | 165 | WP_000146942.1 | DUF3927 family protein | - |
| DL545_RS25685 () | 80826..81260 | - | 435 | WP_000467133.1 | tellurite resistance TerB family protein | - |
| DL545_RS25705 () | 82823..85864 | - | 3042 | WP_075851207.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| DL545_RS25710 () | 85861..86766 | - | 906 | WP_000472529.1 | recombination-associated protein RdgC | - |
| DL545_RS25715 () | 86759..87043 | - | 285 | WP_001177862.1 | hypothetical protein | - |
| DL545_RS25725 () | 87505..88293 | + | 789 | WP_075851205.1 | hypothetical protein | - |
| DL545_RS25730 () | 88333..88755 | + | 423 | WP_075851203.1 | ppfA | - |
| DL545_RS25735 () | 88933..89325 | + | 393 | WP_075851201.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|