MGE detailed information
MGE type: Genomic_island MGE length: 23392 bp
Accession: NZ_CP031653 Location: 239674..263065 Organism: Escherichia coli strain UK_Dog_Liverpool Replicon: chromosome
Accession: NZ_CP031653 Location: 239674..263065 Organism: Escherichia coli strain UK_Dog_Liverpool Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DL545_RS01330 () | 235996..238197 | + | 2202 | WP_000973519.1 | ferric aerobactin receptor IutA | - |
| DL545_RS01345 () | 238723..239420 | + | 698 | Protein_240 | IS1-like element IS1A family transposase | - |
| DL545_RS01355 () | 239674..240696 | - | 1023 | WP_000361402.1 | helicase UvrD | - |
| DL545_RS01360 () | 240681..242246 | - | 1566 | WP_001128474.1 | AAA family ATPase | - |
| DL545_RS01365 () | 242321..242737 | - | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| DL545_RS01370 () | 242734..242964 | - | 231 | WP_001261286.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| DL545_RS01380 () | 243524..243742 | + | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| DL545_RS01385 () | 243744..244049 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| DL545_RS01390 () | 244050..244856 | + | 807 | WP_000016970.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| DL545_RS01395 () | 245578..246333 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| DL545_RS01400 () | 246921..248087 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| DL545_RS01405 () | 248087..249058 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| DL545_RS01415 () | 249796..250698 | + | 903 | WP_064766247.1 | DUF1281 domain-containing protein | - |
| DL545_RS01420 () | 250702..251006 | + | 305 | Protein_252 | hypothetical protein | - |
| DL545_RS01425 () | 251083..251766 | + | 684 | WP_032181561.1 | DNA methylase | - |
| DL545_RS01430 () | 251767..251988 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| DL545_RS01435 () | 252002..252436 | + | 435 | WP_001546462.1 | DUF1380 family protein | - |
| DL545_RS01440 () | 252481..253251 | + | 771 | WP_001006251.1 | hypothetical protein | - |
| DL545_RS01455 () | 253788..254090 | + | 303 | WP_001666994.1 | antirestriction protein | - |
| DL545_RS01460 () | 254137..254559 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| DL545_RS01465 () | 254556..254747 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| DL545_RS01470 () | 255019..255267 | - | 249 | WP_071781657.1 | hypothetical protein | - |
| DL545_RS01480 () | 255779..256009 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| DL545_RS01485 () | 256061..257422 | + | 1362 | WP_000199439.1 | DUF3560 domain-containing protein | - |
| DL545_RS01490 () | 257470..258035 | + | 566 | Protein_263 | class I SAM-dependent methyltransferase | - |
| DL545_RS01500 () | 258186..258443 | + | 258 | WP_023147917.1 | hypothetical protein | - |
| DL545_RS27130 () | 258683..258889 | + | 207 | WP_000275856.1 | hypothetical protein | - |
| DL545_RS01515 () | 258915..259454 | + | 540 | WP_000290840.1 | single-stranded DNA-binding protein | - |
| DL545_RS01520 () | 259522..259755 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| DL545_RS01525 () | 259783..259980 | + | 198 | Protein_268 | hypothetical protein | - |
| DL545_RS01530 () | 260035..260469 | + | 435 | WP_000845937.1 | conjugation system SOS inhibitor PsiB | - |
| DL545_RS01535 () | 260466..261185 | + | 720 | WP_001276238.1 | plasmid SOS inhibition protein A | - |
| DL545_RS26825 () | 261197..261385 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 261197..261394 | + | 198 | NuclAT_0 | - | - |
| - () | 261197..261394 | + | 198 | NuclAT_0 | - | - |
| - () | 261197..261394 | + | 198 | NuclAT_0 | - | - |
| - () | 261197..261394 | + | 198 | NuclAT_0 | - | - |
| DL545_RS01540 () | 261442..262811 | + | 1370 | WP_085947770.1 | IS3 family transposase IS150 | Transposase |
| DL545_RS01545 () | 262913..263065 | + | 153 | WP_001135738.1 | type I toxin-antitoxin system toxin HokA | - |
| DL545_RS27295 () | 263054..263113 | - | 60 | WP_212591412.1 | hypothetical protein | - |
| DL545_RS01550 () | 263253..263465 | - | 213 | WP_000014594.1 | RNA chaperone/antiterminator CspA | - |
| DL545_RS01555 () | 263746..264036 | - | 291 | WP_000455798.1 | HTH-type transcriptional regulator | - |
| DL545_RS01560 () | 264470..265180 | + | 711 | WP_000190517.1 | DUF3053 domain-containing protein | - |
| DL545_RS01565 () | 265230..266204 | - | 975 | Protein_278 | glyoxylate/hydroxypyruvate reductase GhrB | - |
| DL545_RS01570 () | 266308..266967 | - | 660 | WP_000747625.1 | OmpA family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|