MGE detailed information
MGE type: Prophage MGE length: 39894 bp
Accession: NZ_CP031609 Location: 2995048..3034941 Organism: Escherichia coli strain N3 Replicon: chromosome
Accession: NZ_CP031609 Location: 2995048..3034941 Organism: Escherichia coli strain N3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AXA56_RS14745 () | 2991773..2992225 | + | 453 | WP_001308712.1 | dihydroneopterin triphosphate diphosphatase | - |
| AXA56_RS14750 () | 2992254..2992994 | + | 741 | WP_000907234.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| AXA56_RS14755 () | 2993029..2993550 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| AXA56_RS14760 () | 2993552..2994154 | - | 603 | WP_096984461.1 | YebB family permuted papain-like enzyme | - |
| AXA56_RS14765 () | 2994225..2994290 | + | 66 | WP_072291033.1 | stress response small protein YobI | - |
| AXA56_RS14770 () | 2994429..2995039 | + | 611 | Protein_2693 | Holliday junction branch migration protein RuvA | - |
| AXA56_RS14775 () | 2995048..2996058 | + | 1011 | WP_000568522.1 | Holliday junction branch migration DNA helicase RuvB | - |
| AXA56_RS14780 () | 2996206..2996991 | - | 786 | WP_000571471.1 | hypothetical protein | VF |
| AXA56_RS14785 () | 2996988..2997743 | - | 756 | WP_000202996.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| AXA56_RS14790 () | 2997822..2998754 | + | 933 | WP_011076428.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| AXA56_RS14795 () | 2998770..3000092 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| AXA56_RS14800 () | 3000212..3001183 | + | 972 | WP_042003777.1 | Lipid A biosynthesis myristoyltransferase | VF |
| AXA56_RS14805 () | 3001315..3002757 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| AXA56_RS14810 () | 3002885..3003754 | - | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| AXA56_RS14815 () | 3004092..3005567 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| AXA56_RS14820 () | 3005802..3007613 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| AXA56_RS14825 () | 3007650..3008291 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| AXA56_RS14830 () | 3008346..3009524 | - | 1179 | WP_000173461.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| AXA56_RS14835 () | 3009658..3009948 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| AXA56_RS14840 () | 3010015..3010371 | + | 357 | WP_001295500.1 | protein YebF | - |
| AXA56_RS14845 () | 3010698..3011357 | + | 660 | WP_042003775.1 | tellurite resistance TerB family protein | - |
| AXA56_RS14850 () | 3011521..3012690 | - | 1170 | WP_116836527.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| AXA56_RS14855 () | 3012747..3013172 | + | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| AXA56_RS14865 () | 3013329..3015389 | + | 2061 | WP_089704300.1 | oligopeptidase B | - |
| AXA56_RS14870 () | 3015386..3016048 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| AXA56_RS14875 () | 3016072..3016728 | - | 657 | WP_000011660.1 | carbon-nitrogen hydrolase family protein | - |
| AXA56_RS14880 () | 3016830..3017060 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| AXA56_RS14885 () | 3017199..3017573 | + | 375 | WP_000204705.1 | CopC domain-containing protein YobA | - |
| AXA56_RS14890 () | 3017577..3018449 | + | 873 | WP_042003773.1 | copper homeostasis membrane protein CopD | - |
| AXA56_RS14895 () | 3018462..3018803 | + | 342 | WP_077779160.1 | YebY family protein | - |
| - () | 3018833..3019101 | - | 269 | - | - | Antitoxin Detail |
| - () | 3018960..3019063 | + | 104 | - | - | Toxin Detail |
| AXA56_RS14900 () | 3019198..3019854 | + | 657 | WP_042003772.1 | protein-serine/threonine phosphatase | - |
| AXA56_RS14905 () | 3019855..3020046 | - | 192 | WP_001296140.1 | YebW family protein | - |
| AXA56_RS14910 () | 3020151..3020387 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| AXA56_RS14915 () | 3020505..3021944 | - | 1440 | WP_116836816.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| AXA56_RS14920 () | 3022024..3024657 | - | 2634 | WP_001306757.1 | hypothetical protein | VF |
| AXA56_RS14925 () | 3024626..3025909 | - | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| AXA56_RS14930 () | 3026039..3026536 | + | 498 | WP_116836528.1 | L-methionine (R)-S-oxide reductase | - |
| AXA56_RS14935 () | 3026633..3027331 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| AXA56_RS14940 () | 3027351..3029399 | + | 2049 | WP_096984522.1 | carboxy terminal-processing peptidase | - |
| AXA56_RS14945 () | 3029591..3030472 | + | 882 | WP_000984517.1 | protease HtpX | - |
| AXA56_RS14950 () | 3030518..3031891 | - | 1374 | WP_096984523.1 | MFS transporter | - |
| AXA56_RS14955 () | 3032068..3032859 | + | 792 | WP_047669022.1 | DNA-binding transcriptional regulator KdgR | - |
| AXA56_RS14960 () | 3033003..3033242 | - | 240 | WP_001211011.1 | hypothetical protein | - |
| AXA56_RS14965 () | 3033401..3033544 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| AXA56_RS14970 () | 3033619..3033906 | + | 288 | WP_001006866.1 | YebO family protein | - |
| AXA56_RS14980 () | 3034576..3034719 | + | 144 | WP_001295496.1 | YobF family protein | - |
| AXA56_RS14985 () | 3034732..3034941 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| AXA56_RS14990 () | 3035107..3035916 | + | 810 | WP_000010120.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| AXA56_RS14995 () | 3035913..3036479 | - | 567 | WP_042003768.1 | manganese efflux pump MntP | - |
| AXA56_RS15005 () | 3036908..3037366 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| AXA56_RS15010 () | 3037421..3038272 | - | 852 | WP_001331209.1 | PTS mannose transporter subunit IID | - |
| AXA56_RS15015 () | 3038285..3039085 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|