MGE detailed information
MGE type: Prophage MGE length: 154302 bp
Accession: NZ_CP031546 Location: 3763545..3917846 Organism: Escherichia coli strain cq9 Replicon: chromosome
Accession: NZ_CP031546 Location: 3763545..3917846 Organism: Escherichia coli strain cq9 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DS732_RS19240 () | 3759186..3760847 | + | 1662 | WP_063102617.1 | DNA repair protein RecN | - |
| DS732_RS19245 () | 3760996..3761337 | + | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| DS732_RS19250 () | 3761399..3761689 | - | 291 | WP_001117838.1 | RnfH family protein | - |
| DS732_RS19255 () | 3761679..3762116 | - | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| DS732_RS19260 () | 3762287..3762769 | + | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| DS732_RS19270 () | 3763545..3764108 | - | 564 | WP_100635168.1 | DUF4376 domain-containing protein | - |
| DS732_RS19275 () | 3764108..3766111 | - | 2004 | WP_100635169.1 | prophage tail fiber N-terminal domain-containing protein | - |
| DS732_RS19280 () | 3766137..3767225 | - | 1089 | WP_063124087.1 | late control protein | - |
| DS732_RS19285 () | 3767216..3767434 | - | 219 | WP_001107808.1 | tail protein X | - |
| DS732_RS19290 () | 3767409..3767897 | - | 489 | WP_000228002.1 | phage tail protein | - |
| DS732_RS19295 () | 3767900..3769552 | - | 1653 | WP_064578971.1 | hypothetical protein | - |
| DS732_RS31680 () | 3769533..3769670 | - | 138 | WP_161424571.1 | hypothetical protein | - |
| DS732_RS19300 () | 3769670..3769972 | - | 303 | WP_001291419.1 | phage tail assembly protein | - |
| DS732_RS19305 () | 3770031..3770549 | - | 519 | WP_000627737.1 | phage major tail tube protein | - |
| DS732_RS19310 () | 3770546..3772021 | - | 1476 | WP_064987001.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| DS732_RS19315 () | 3772076..3772618 | - | 543 | WP_100635170.1 | tail fiber assembly protein | - |
| DS732_RS19320 () | 3772621..3773850 | - | 1230 | WP_100635171.1 | phage tail protein | - |
| DS732_RS19325 () | 3773847..3774437 | - | 591 | WP_000997166.1 | phage tail protein I | - |
| DS732_RS19330 () | 3774430..3775344 | - | 915 | WP_064986935.1 | baseplate J/gp47 family protein | - |
| DS732_RS19335 () | 3775319..3775675 | - | 357 | WP_000579231.1 | GPW/gp25 family protein | - |
| DS732_RS19340 () | 3775709..3776332 | - | 624 | WP_000049989.1 | phage baseplate assembly protein V | - |
| DS732_RS19345 () | 3776316..3776867 | - | 552 | WP_001372341.1 | hypothetical protein | - |
| DS732_RS19350 () | 3776879..3777601 | - | 723 | WP_000290767.1 | hypothetical protein | - |
| DS732_RS19355 () | 3777582..3777984 | - | 403 | Protein_3525 | head-tail joining protein | - |
| DS732_RS19360 () | 3777987..3778352 | - | 366 | WP_063100209.1 | DNA breaking-rejoining protein | - |
| DS732_RS19365 () | 3778403..3779431 | - | 1029 | WP_000522570.1 | major capsid protein | - |
| DS732_RS19370 () | 3779501..3779836 | - | 336 | WP_000598340.1 | head decoration protein | - |
| DS732_RS19375 () | 3779875..3781492 | - | 1618 | Protein_3529 | S49 family peptidase | - |
| DS732_RS19380 () | 3781482..3783005 | - | 1524 | WP_064986936.1 | phage portal protein | - |
| DS732_RS19385 () | 3783050..3783259 | - | 210 | WP_000263126.1 | gpW family protein | - |
| DS732_RS19390 () | 3783263..3785179 | - | 1917 | WP_064986933.1 | phage terminase large subunit family protein | - |
| DS732_RS19395 () | 3785151..3785699 | - | 549 | WP_000867510.1 | terminase small subunit | - |
| DS732_RS19400 () | 3786030..3786227 | + | 198 | WP_071531612.1 | hypothetical protein | - |
| DS732_RS19405 () | 3786326..3786622 | - | 297 | WP_000415821.1 | hypothetical protein | - |
| DS732_RS19410 () | 3786984..3787094 | - | 111 | Protein_3536 | hypothetical protein | - |
| DS732_RS19415 () | 3787228..3787509 | - | 282 | WP_000271098.1 | hypothetical protein | - |
| DS732_RS19420 () | 3787580..3787957 | - | 378 | WP_000014544.1 | M15 family metallopeptidase | - |
| DS732_RS19425 () | 3787960..3788235 | - | 276 | WP_000950570.1 | phage holin family protein | - |
| DS732_RS19430 () | 3788225..3788617 | - | 393 | WP_001294585.1 | holin | - |
| DS732_RS19440 () | 3789036..3789299 | - | 264 | WP_000738063.1 | hypothetical protein | VF |
| DS732_RS19445 () | 3789312..3790271 | - | 960 | WP_001372428.1 | hypothetical protein | VF |
| DS732_RS19465 () | 3790656..3791714 | - | 1059 | WP_000024324.1 | site-specific DNA-methyltransferase | - |
| DS732_RS19470 () | 3791865..3792062 | - | 198 | WP_000917767.1 | hypothetical protein | - |
| DS732_RS19475 () | 3792323..3793375 | + | 1053 | WP_000646552.1 | hypothetical protein | - |
| DS732_RS19480 () | 3793376..3793768 | + | 393 | WP_001041173.1 | hypothetical protein | - |
| DS732_RS19485 () | 3793765..3794430 | + | 666 | WP_000969103.1 | hypothetical protein | - |
| DS732_RS19490 () | 3794461..3794808 | - | 348 | WP_024198211.1 | antitermination protein | - |
| DS732_RS19495 () | 3794808..3795065 | - | 258 | WP_001064805.1 | hypothetical protein | - |
| DS732_RS19500 () | 3795062..3796453 | - | 1392 | WP_063100636.1 | replicative DNA helicase | - |
| DS732_RS19505 () | 3796450..3797340 | - | 891 | WP_000462882.1 | ATP-binding protein | - |
| DS732_RS19510 () | 3797360..3798337 | - | 978 | WP_000092411.1 | hypothetical protein | - |
| DS732_RS19515 () | 3798334..3798633 | - | 300 | WP_000995582.1 | hypothetical protein | - |
| DS732_RS19520 () | 3798630..3798854 | - | 225 | WP_063100635.1 | hypothetical protein | - |
| DS732_RS19525 () | 3798851..3799513 | - | 663 | WP_063100634.1 | ash family protein | - |
| DS732_RS19530 () | 3799626..3800333 | - | 708 | WP_001406052.1 | Rha family transcriptional regulator | - |
| DS732_RS19535 () | 3800453..3800704 | + | 252 | WP_001422786.1 | bssS family protein | - |
| DS732_RS19545 () | 3801110..3801766 | + | 657 | WP_000838346.1 | helix-turn-helix domain-containing protein | - |
| DS732_RS19550 () | 3801870..3802400 | + | 531 | WP_063100633.1 | helix-turn-helix domain-containing protein | - |
| DS732_RS19555 () | 3802597..3802785 | + | 189 | WP_000391589.1 | hypothetical protein | - |
| DS732_RS19560 () | 3802782..3803363 | + | 582 | WP_063100631.1 | hypothetical protein | - |
| DS732_RS19570 () | 3803725..3804552 | + | 828 | WP_063100630.1 | serine protease | - |
| DS732_RS19575 () | 3804593..3804963 | + | 371 | Protein_3563 | DUF5406 family protein | - |
| DS732_RS19580 () | 3804994..3805236 | + | 243 | WP_021558719.1 | DUF4222 domain-containing protein | - |
| DS732_RS19585 () | 3805240..3805386 | + | 147 | WP_001030138.1 | hypothetical protein | - |
| DS732_RS19595 () | 3805559..3806731 | + | 1173 | WP_063100629.1 | hypothetical protein ; Integrase | Integrase |
| DS732_RS19600 () | 3807075..3808274 | + | 1200 | WP_000124722.1 | hypothetical protein ; Integrase | Integrase |
| DS732_RS19605 () | 3808275..3809972 | - | 1698 | WP_044808800.1 | DUF2326 domain-containing protein | - |
| DS732_RS19610 () | 3809959..3810192 | - | 234 | WP_000628292.1 | hypothetical protein | - |
| DS732_RS19615 () | 3810179..3810727 | - | 549 | WP_000534626.1 | hypothetical protein | - |
| DS732_RS19620 () | 3810730..3810990 | - | 261 | WP_044808802.1 | hypothetical protein | - |
| DS732_RS19625 () | 3811443..3812015 | - | 573 | WP_000446145.1 | Polarity suppression protein | - |
| DS732_RS19630 () | 3812089..3812589 | - | 501 | WP_000638628.1 | ogr/Delta-like zinc finger family protein | - |
| DS732_RS19635 () | 3812586..3813320 | - | 735 | WP_063102804.1 | hypothetical protein | - |
| DS732_RS19645 () | 3813873..3814139 | + | 267 | WP_001149153.1 | AlpA family transcriptional regulator | - |
| DS732_RS19650 () | 3814136..3814726 | + | 591 | WP_063102972.1 | host cell division inhibitor Icd-like protein | - |
| DS732_RS19655 () | 3814719..3815006 | + | 288 | WP_001244664.1 | hypothetical protein | - |
| DS732_RS19660 () | 3814999..3815454 | + | 456 | WP_000459307.1 | hypothetical protein | - |
| DS732_RS19665 () | 3815590..3815910 | + | 321 | WP_000856729.1 | DUF5375 domain-containing protein | - |
| DS732_RS19670 () | 3815925..3818258 | + | 2334 | WP_063102971.1 | toprim domain-containing protein | - |
| DS732_RS19685 () | 3818922..3822177 | - | 3256 | Protein_3581 | AIDA repeat-containing protein | - |
| DS732_RS31685 () | 3822242..3822361 | - | 120 | WP_000927517.1 | hypothetical protein | - |
| DS732_RS19695 () | 3822516..3822734 | - | 219 | WP_071529442.1 | recombinase family protein | - |
| DS732_RS19705 () | 3823090..3824463 | - | 1374 | WP_000961357.1 | DUF5507 domain-containing protein | - |
| DS732_RS19715 () | 3824979..3825263 | - | 285 | WP_064986930.1 | hypothetical protein | - |
| DS732_RS19720 () | 3825458..3826774 | + | 1317 | WP_047928884.1 | hypothetical protein ; Integrase | Integrase |
| DS732_RS19725 () | 3826904..3827500 | + | 597 | WP_047928883.1 | hypothetical protein | - |
| DS732_RS19730 () | 3827587..3829218 | - | 1632 | WP_047928882.1 | hypothetical protein | - |
| DS732_RS19735 () | 3829911..3830138 | + | 228 | WP_000266640.1 | AlpA family phage regulatory protein | - |
| DS732_RS19740 () | 3830244..3830471 | + | 228 | WP_024195545.1 | DUF3987 domain-containing protein | - |
| DS732_RS19745 () | 3830720..3832153 | + | 1434 | WP_001586056.1 | DUF3987 domain-containing protein | - |
| DS732_RS19750 () | 3832421..3833992 | - | 1572 | WP_000381443.1 | IS66 family transposase IS679 | Transposase |
| DS732_RS19755 () | 3834012..3834359 | - | 348 | WP_000624618.1 | IS66 family transposase ISCro1 | Transposase |
| DS732_RS19760 () | 3834359..3835009 | - | 651 | WP_000993956.1 | IS66 family transposase IS679 | Transposase |
| DS732_RS19765 () | 3835723..3836286 | + | 564 | WP_064986945.1 | inovirus-type Gp2 protein | - |
| DS732_RS19770 () | 3836612..3837947 | - | 1336 | Protein_3596 | hypothetical protein | VF |
| DS732_RS19780 () | 3838441..3838560 | - | 120 | Protein_3597 | IS481 family transposase ISKpn28 | Transposase |
| DS732_RS19785 () | 3838639..3838869 | - | 231 | Protein_3598 | IS4 family transposase ISSfl1 | Transposase |
| DS732_RS19790 () | 3839013..3840122 | - | 1110 | WP_016243364.1 | hypothetical protein | VF |
| DS732_RS19795 () | 3840479..3841711 | + | 1233 | WP_000742442.1 | extracellular solute-binding protein | - |
| DS732_RS19800 () | 3841774..3843081 | + | 1308 | WP_048943279.1 | sugar ABC transporter permease | - |
| DS732_RS19805 () | 3843092..3843943 | + | 852 | WP_000079398.1 | sugar ABC transporter permease | - |
| DS732_RS19810 () | 3843948..3845150 | + | 1203 | WP_048943278.1 | arabinogalactan endo-beta-1,4-galactanase | - |
| DS732_RS19815 () | 3845182..3847239 | + | 2058 | WP_001031684.1 | beta-galactosidase | - |
| DS732_RS19820 () | 3847303..3847617 | + | 315 | WP_000254058.1 | glucose PTS transporter subunit EIIB | - |
| DS732_RS19825 () | 3847754..3849025 | - | 1272 | WP_001098396.1 | maltoporin | - |
| DS732_RS19830 () | 3849296..3850366 | + | 1071 | WP_000837748.1 | LacI family DNA-binding transcriptional regulator | - |
| DS732_RS19835 () | 3850699..3851044 | + | 346 | Protein_3608 | ISL3 family transposase | - |
| DS732_RS19840 () | 3851095..3852081 | - | 987 | WP_071886293.1 | IS3 family transposase IS2 | Transposase |
| DS732_RS19845 () | 3852507..3853517 | + | 1011 | WP_000053329.1 | substrate-binding domain-containing protein | - |
| DS732_RS19850 () | 3853611..3855737 | + | 2127 | WP_000433621.1 | alpha-galactosidase | - |
| DS732_RS19855 () | 3855792..3857069 | + | 1278 | WP_001099190.1 | MFS transporter | - |
| DS732_RS19860 () | 3857066..3858496 | + | 1431 | WP_000813683.1 | glycoside hydrolase family 32 protein | - |
| DS732_RS19865 () | 3858560..3859075 | + | 516 | WP_000523728.1 | PTS glucose transporter subunit IIA | - |
| DS732_RS19870 () | 3859081..3859284 | + | 204 | WP_001313182.1 | DUF2913 family protein | - |
| DS732_RS19875 () | 3859346..3859657 | + | 312 | WP_001313183.1 | DUF2913 family protein | - |
| DS732_RS19880 () | 3859687..3860613 | + | 927 | WP_064986944.1 | aminoimidazole riboside kinase | - |
| DS732_RS19885 () | 3860713..3862209 | + | 1497 | WP_000716410.1 | carbohydrate porin | - |
| DS732_RS19890 () | 3862446..3863237 | - | 792 | Protein_3619 | IS256 family transposase IS1414 | Transposase |
| DS732_RS19895 () | 3863293..3864032 | + | 740 | Protein_3620 | IS3 family transposase IS629 | Transposase |
| DS732_RS19905 () | 3864705..3866213 | + | 1509 | WP_063084450.1 | group II intron reverse transcriptase/maturase | - |
| DS732_RS19910 () | 3866294..3866746 | + | 453 | Protein_3622 | IS3 family transposase ISEc14 | Transposase |
| DS732_RS19915 () | 3866973..3872708 | - | 5736 | WP_064986942.1 | DUF4011 domain-containing protein | - |
| DS732_RS19920 () | 3872895..3874937 | - | 2043 | WP_000995974.1 | DUF262 domain-containing HNH endonuclease family protein | - |
| DS732_RS19925 () | 3874930..3876381 | - | 1452 | WP_077249079.1 | DUF262 domain-containing protein | - |
| DS732_RS19930 () | 3876406..3876828 | - | 423 | Protein_3626 | IS3 family transposase ISLad1 | Transposase |
| DS732_RS19940 () | 3877077..3877859 | - | 783 | WP_116794638.1 | IS21 family transposase IS100kyp | Transposase |
| DS732_RS19945 () | 3877856..3878878 | - | 1023 | WP_072716700.1 | IS21 family transposase IS100kyp | Transposase |
| DS732_RS19950 () | 3879065..3879917 | - | 853 | Protein_3629 | type I restriction-modification system subunit M | - |
| DS732_RS19955 () | 3879918..3880124 | + | 207 | Protein_3630 | transposase | - |
| DS732_RS19960 () | 3880217..3881445 | + | 1229 | WP_162869658.1 | IS3 family transposase IS2 | Transposase |
| DS732_RS19965 () | 3881449..3882156 | + | 708 | Protein_3632 | IS5 family transposase ISKpn26 | Transposase |
| DS732_RS19975 () | 3882304..3885420 | - | 3117 | WP_064986990.1 | HsdR family type I site-specific deoxyribonuclease | - |
| DS732_RS19980 () | 3885542..3886777 | - | 1236 | WP_072644252.1 | restriction endonuclease subunit S | - |
| DS732_RS19985 () | 3886774..3888330 | - | 1557 | WP_062895418.1 | type I restriction-modification system subunit M | - |
| DS732_RS19990 () | 3888594..3889466 | + | 873 | WP_072644253.1 | GTPase family protein | - |
| DS732_RS19995 () | 3889838..3892684 | + | 2847 | WP_072644254.1 | Ag43/Cah family autotransporter adhesin | - |
| DS732_RS20000 () | 3892756..3892989 | + | 234 | WP_064986988.1 | DUF905 family protein | - |
| DS732_RS20010 () | 3893079..3893897 | + | 819 | WP_072644256.1 | DUF945 domain-containing protein | - |
| DS732_RS20015 () | 3893988..3894473 | + | 486 | WP_072815258.1 | antirestriction protein | - |
| DS732_RS20020 () | 3894489..3894965 | + | 477 | WP_071045793.1 | RadC family protein | - |
| DS732_RS20025 () | 3895034..3895255 | + | 222 | WP_000692353.1 | DUF987 domain-containing protein | - |
| DS732_RS20030 () | 3895334..3895708 | + | 375 | WP_072648994.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| DS732_RS20035 () | 3895754..3896131 | + | 378 | WP_072644276.1 | TA system toxin CbtA family protein | Toxin Detail |
| DS732_RS20040 () | 3896128..3896277 | + | 150 | Protein_3645 | hypothetical protein | - |
| DS732_RS20045 () | 3896353..3896550 | + | 198 | WP_094770706.1 | DUF957 domain-containing protein | - |
| DS732_RS20050 () | 3896647..3897492 | + | 846 | WP_001280435.1 | DUF4942 domain-containing protein | - |
| DS732_RS20060 () | 3898226..3900478 | + | 2253 | Protein_3648 | alpha-amylase family protein | - |
| DS732_RS20065 () | 3900814..3901791 | + | 978 | WP_001315804.1 | carbon starvation induced protein CsiD | - |
| DS732_RS20070 () | 3901811..3903079 | + | 1269 | WP_000271984.1 | L-2-hydroxyglutarate oxidase | - |
| DS732_RS20075 () | 3903102..3904550 | + | 1449 | WP_000772854.1 | NADP-dependent succinate-semialdehyde dehydrogenase | - |
| DS732_RS20080 () | 3904564..3905844 | + | 1281 | WP_000097660.1 | hypothetical protein | VF |
| DS732_RS20085 () | 3906082..3907482 | + | 1401 | WP_001295173.1 | GABA permease | - |
| DS732_RS20090 () | 3907503..3908165 | + | 663 | WP_000156811.1 | DNA-binding transcriptional regulator CsiR | - |
| DS732_RS20095 () | 3908166..3908615 | - | 450 | WP_000522415.1 | potassium binding protein Kbp | - |
| DS732_RS20100 () | 3908699..3908857 | - | 159 | WP_000508177.1 | YqaE/Pmp3 family membrane protein | - |
| DS732_RS20105 () | 3909040..3909339 | + | 300 | WP_000137280.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| DS732_RS20110 () | 3909349..3909873 | + | 525 | WP_001229444.1 | thiosulfate sulfurtransferase YgaP | - |
| DS732_RS20115 () | 3909920..3910324 | - | 405 | WP_000115383.1 | DNA-binding protein StpA | - |
| DS732_RS20120 () | 3910992..3911441 | + | 450 | WP_000492656.1 | L-alanine exporter AlaE | - |
| DS732_RS20125 () | 3911478..3911822 | - | 345 | WP_000281320.1 | DUF2002 family protein | - |
| DS732_RS20130 () | 3911974..3912303 | + | 330 | WP_001295174.1 | DUF883 domain-containing protein | - |
| DS732_RS20135 () | 3912551..3912796 | + | 246 | WP_001223227.1 | glutaredoxin-like protein NrdH | - |
| DS732_RS20140 () | 3912793..3913203 | + | 411 | WP_000080944.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| DS732_RS20145 () | 3913176..3915320 | + | 2145 | WP_000246537.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| DS732_RS20150 () | 3915330..3916289 | + | 960 | WP_000777969.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| DS732_RS20155 () | 3916644..3917846 | + | 1203 | WP_000985494.1 | hypothetical protein | VF |
| DS732_RS20160 () | 3917839..3918903 | + | 1065 | WP_000774978.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| DS732_RS20165 () | 3918961..3919953 | + | 993 | WP_063102970.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| DS732_RS20170 () | 3920245..3921426 | + | 1182 | WP_000165706.1 | MFS transporter | - |
| DS732_RS20175 () | 3921550..3922287 | + | 738 | WP_000445658.1 | L-valine exporter subunit YgaZ | - |
| DS732_RS20180 () | 3922277..3922612 | + | 336 | WP_000119750.1 | L-valine transporter subunit YgaH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|