MGE detailed information
MGE type: Prophage MGE length: 72739 bp
Accession: NZ_CP031546 Location: 2591145..2663883 Organism: Escherichia coli strain cq9 Replicon: chromosome
Accession: NZ_CP031546 Location: 2591145..2663883 Organism: Escherichia coli strain cq9 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DS732_RS13130 () | 2586535..2587233 | + | 699 | WP_000577184.1 | GntR family transcriptional regulator | - |
| DS732_RS13135 () | 2587278..2588177 | - | 900 | WP_000087216.1 | O-acetylserine/cysteine exporter | - |
| DS732_RS13140 () | 2588372..2589559 | + | 1188 | WP_001054164.1 | efflux MFS transporter YdeE | - |
| DS732_RS13145 () | 2589686..2589781 | + | 96 | WP_000901367.1 | protein MgtS | - |
| DS732_RS32095 () | 2589781..2589885 | + | 105 | WP_211180496.1 | protein MgtT | - |
| DS732_RS13150 () | 2590000..2590890 | - | 891 | WP_000592826.1 | diguanylate cyclase DgcZ | - |
| DS732_RS13155 () | 2591145..2591537 | - | 393 | WP_000671731.1 | YdeI family stress tolerance OB fold protein | - |
| DS732_RS13160 () | 2591813..2592331 | + | 519 | WP_001024561.1 | 2-oxo-tetronate isomerase | - |
| DS732_RS13170 () | 2592376..2594421 | - | 2046 | WP_001296767.1 | peptidyl-dipeptidase Dcp | - |
| DS732_RS13180 () | 2594558..2595303 | + | 746 | Protein_2394 | hypothetical protein | VF |
| DS732_RS13185 () | 2595392..2596078 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| DS732_RS13190 () | 2596256..2596459 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| DS732_RS13195 () | 2596495..2597955 | - | 1461 | WP_000527758.1 | mannitol dehydrogenase family protein | - |
| DS732_RS13200 () | 2598044..2599327 | - | 1284 | Protein_2398 | MHS family MFS transporter YdfJ | - |
| DS732_RS31625 () | 2599930..2600043 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| DS732_RS13210 () | 2600112..2600345 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| DS732_RS13215 () | 2600662..2601252 | + | 591 | WP_000086514.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| DS732_RS13220 () | 2601350..2601925 | - | 576 | WP_000885616.1 | tail fiber assembly protein | - |
| DS732_RS13225 () | 2601925..2604885 | - | 2961 | WP_100635157.1 | prophage tail fiber N-terminal domain-containing protein | - |
| DS732_RS13230 () | 2604950..2605549 | - | 600 | WP_053292719.1 | hypothetical protein | VF |
| DS732_RS13235 () | 2605617..2609095 | - | 3479 | Protein_2405 | host specificity protein J | - |
| DS732_RS13240 () | 2609156..2609758 | - | 603 | WP_000090849.1 | tail assembly protein | - |
| DS732_RS13245 () | 2609695..2610438 | - | 744 | WP_001484131.1 | C40 family peptidase | - |
| DS732_RS13250 () | 2610444..2611142 | - | 699 | WP_001152612.1 | phage minor tail protein L | - |
| DS732_RS13255 () | 2611142..2611471 | - | 330 | WP_000847351.1 | phage tail protein | - |
| DS732_RS13260 () | 2611468..2614029 | - | 2562 | WP_053292699.1 | phage tail tape measure protein | - |
| DS732_RS13265 () | 2614022..2614456 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| DS732_RS13270 () | 2614438..2614860 | - | 423 | WP_000479193.1 | phage minor tail protein G | - |
| DS732_RS13275 () | 2614876..2615616 | - | 741 | WP_001317730.1 | phage tail protein | - |
| DS732_RS13280 () | 2615624..2616019 | - | 396 | WP_000683129.1 | phage minor tail U family protein | - |
| DS732_RS13285 () | 2616016..2616594 | - | 579 | WP_000975081.1 | phage tail protein | - |
| DS732_RS13290 () | 2616606..2616959 | - | 354 | WP_000785282.1 | head-tail joining protein | - |
| DS732_RS13295 () | 2616971..2617366 | - | 396 | WP_000158875.1 | DNA-packaging protein FI | - |
| DS732_RS13300 () | 2617408..2618433 | - | 1026 | WP_000063254.1 | major capsid protein | - |
| DS732_RS13305 () | 2618489..2618821 | - | 333 | WP_001358225.1 | head decoration protein | - |
| DS732_RS13310 () | 2618831..2620150 | - | 1320 | WP_000123242.1 | S49 family peptidase | - |
| DS732_RS13315 () | 2620131..2621732 | - | 1602 | WP_001345555.1 | phage portal protein | - |
| DS732_RS13320 () | 2621729..2621935 | - | 207 | WP_000198149.1 | gpW family protein | - |
| DS732_RS13325 () | 2621932..2623857 | - | 1926 | WP_001027321.1 | phage terminase large subunit family protein | - |
| DS732_RS13330 () | 2623832..2624377 | - | 546 | WP_063102724.1 | DNA-packaging protein | - |
| DS732_RS13340 () | 2624766..2624999 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| DS732_RS13345 () | 2625057..2625466 | + | 410 | Protein_2426 | DUF1398 domain-containing protein | - |
| DS732_RS13350 () | 2625618..2625791 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| DS732_RS31630 () | 2625963..2626118 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| DS732_RS31635 () | 2626198..2626263 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| DS732_RS13360 () | 2626266..2626454 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| DS732_RS13365 () | 2626465..2626677 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| DS732_RS13370 () | 2627040..2627537 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| DS732_RS13375 () | 2627534..2628067 | - | 534 | WP_001092971.1 | lysozyme | - |
| DS732_RS13380 () | 2628064..2628375 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| DS732_RS13385 () | 2628380..2628595 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| DS732_RS32100 () | 2628815..2628985 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| DS732_RS13390 () | 2629349..2629564 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| DS732_RS13395 () | 2629865..2630077 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| DS732_RS31640 () | 2630132..2630221 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| DS732_RS13400 () | 2630499..2631251 | - | 753 | WP_001047135.1 | antitermination protein | - |
| DS732_RS13405 () | 2631265..2632314 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| DS732_RS13410 () | 2632316..2632594 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| DS732_RS13415 () | 2632661..2632912 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| DS732_RS13420 () | 2633129..2633284 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| DS732_RS13425 () | 2633356..2633643 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| DS732_RS13430 () | 2633643..2633882 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| DS732_RS13435 () | 2633907..2634212 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| DS732_RS13440 () | 2634415..2634747 | + | 333 | WP_001301033.1 | protein FlxA | - |
| DS732_RS13450 () | 2635184..2636497 | - | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| DS732_RS31940 () | 2637266..2637553 | - | 288 | Protein_2450 | hypothetical protein | - |
| DS732_RS13465 () | 2638164..2638520 | - | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| DS732_RS13470 () | 2638517..2638939 | - | 423 | WP_001151262.1 | DUF977 family protein | - |
| DS732_RS13475 () | 2638980..2639945 | - | 966 | WP_000054512.1 | hypothetical protein | - |
| DS732_RS13480 () | 2639926..2640447 | - | 522 | WP_000705358.1 | hypothetical protein | - |
| DS732_RS13485 () | 2640431..2640661 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| DS732_RS13490 () | 2640745..2641152 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| DS732_RS13495 () | 2641319..2641474 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| DS732_RS13505 () | 2641634..2641852 | + | 219 | WP_001171942.1 | hypothetical protein | - |
| DS732_RS13515 () | 2642420..2642608 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| DS732_RS13520 () | 2642605..2642796 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| DS732_RS13525 () | 2642889..2645360 | + | 2472 | WP_000048342.1 | exonuclease | - |
| DS732_RS13530 () | 2645433..2645684 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| DS732_RS13535 () | 2645719..2646999 | + | 1281 | WP_000876958.1 | hypothetical protein ; Integrase | Integrase |
| DS732_RS13545 () | 2647187..2648206 | - | 1020 | WP_000836079.1 | Zn-dependent oxidoreductase | - |
| DS732_RS13550 () | 2648218..2649432 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| DS732_RS13560 () | 2649638..2649964 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| DS732_RS13565 () | 2650099..2650440 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| DS732_RS13570 () | 2650475..2651035 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| DS732_RS13575 () | 2651038..2651748 | - | 711 | WP_063102789.1 | YnfC family lipoprotein | - |
| DS732_RS13580 () | 2651856..2652161 | + | 306 | WP_001307224.1 | DUF1161 domain-containing protein | - |
| DS732_RS13585 () | 2652360..2654786 | + | 2427 | WP_000041558.1 | dimethyl sulfoxide reductase subunit A | - |
| DS732_RS13590 () | 2654847..2657270 | + | 2424 | WP_074156494.1 | dimethyl sulfoxide reductase subunit A | - |
| DS732_RS13595 () | 2657281..2657898 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| DS732_RS13600 () | 2657900..2658754 | + | 855 | WP_000526490.1 | dimethyl sulfoxide reductase anchor subunit | - |
| DS732_RS13605 () | 2658797..2659411 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| DS732_RS13610 () | 2659570..2660862 | + | 1293 | WP_071586481.1 | voltage-gated ClC-type chloride channel ClcB | - |
| DS732_RS13615 () | 2660815..2661510 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| DS732_RS13620 () | 2661635..2662855 | - | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| DS732_RS13625 () | 2662990..2663883 | - | 894 | WP_001019530.1 | hypothetical protein | VF |
| DS732_RS13630 () | 2663990..2665243 | + | 1254 | WP_000091840.1 | MFS transporter | - |
| DS732_RS32105 () | 2665292..2665411 | - | 120 | WP_001299090.1 | hypothetical protein | - |
| DS732_RS13640 () | 2665667..2665975 | + | 309 | WP_001342195.1 | acid resistance repetitive basic protein Asr | - |
| DS732_RS13645 () | 2666068..2666151 | + | 84 | WP_000233090.1 | hypothetical protein | - |
| DS732_RS13650 () | 2666251..2667072 | + | 822 | WP_001260840.1 | serine protease | - |
| DS732_RS13655 () | 2667111..2667440 | - | 330 | WP_000046661.1 | multidrug/spermidine efflux SMR transporter subunit MdtI | - |
| DS732_RS13660 () | 2667427..2667792 | - | 366 | WP_000276152.1 | multidrug/spermidine efflux SMR transporter subunit MdtJ | - |
| DS732_RS32110 () | 2667899..2668000 | - | 102 | WP_211180498.1 | protein YdgV | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|